RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-231ENST00000557336 SFXN1Q9H9B4 322 aa12.41□□□□□ -0.42
HNRNPC-231ENST00000557336 UBN1Q9NPG3 1134 aa12.41□□□□□ -0.42
HNRNPC-231ENST00000557336 MRPL17Q9NRX2 175 aaKnown RBP12.41□□□□□ -0.42
HNRNPC-231ENST00000557336 CACNG4Q9UBN1 327 aa12.41□□□□□ -0.42
HNRNPC-231ENST00000557336 DBR1Q9UK59 544 aaKnown RBP12.41□□□□□ -0.42
HNRNPC-231ENST00000557336 H0Y858 1186 aa12.4□□□□□ -0.42
HNRNPC-231ENST00000557336 ARHGAP33O14559 1287 aa12.4□□□□□ -0.42
HNRNPC-231ENST00000557336 NEMFO60524 1076 aa12.4□□□□□ -0.42
HNRNPC-231ENST00000557336 MED24O75448 989 aa12.4□□□□□ -0.42
HNRNPC-231ENST00000557336 RFPL2O75678 378 aa12.4□□□□□ -0.42
HNRNPC-231ENST00000557336 DGAT1O75907 488 aa12.4□□□□□ -0.42
HNRNPC-231ENST00000557336 ERLIN2O94905 339 aa12.4□□□□□ -0.42
HNRNPC-231ENST00000557336 EDN1P05305 212 aa12.4□□□□□ -0.42
HNRNPC-231ENST00000557336 MYBP10242 640 aa12.4□□□□□ -0.42
HNRNPC-231ENST00000557336 DSG1Q02413 1049 aa12.4□□□□□ -0.42
HNRNPC-231ENST00000557336 ANKRD1Q15327 319 aa12.4□□□□□ -0.42
HNRNPC-231ENST00000557336 LILRA6Q6PI73 481 aa12.4□□□□□ -0.42
HNRNPC-231ENST00000557336 C15orf39Q6ZRI6 1047 aa12.4□□□□□ -0.42
HNRNPC-231ENST00000557336 CATSPER3Q86XQ3 398 aa12.4□□□□□ -0.42
HNRNPC-231ENST00000557336 CMASQ8NFW8 434 aaPredicted RBP12.4□□□□□ -0.42
HNRNPC-231ENST00000557336 FAM193BQ96PV7 902 aaPredicted RBP12.4□□□□□ -0.42
HNRNPC-231ENST00000557336 PAAF1Q9BRP4 392 aa12.4□□□□□ -0.42
HNRNPC-231ENST00000557336 APOL6Q9BWW8 343 aa12.4□□□□□ -0.42
HNRNPC-231ENST00000557336 GIT1Q9Y2X7 761 aa12.4□□□□□ -0.42
HNRNPC-231ENST00000557336 FAM186AA6NE01 2351 aa12.4□□□□□ -0.43
HNRNPC-231ENST00000557336 C2orf16Q68DN1 1984 aa12.39□□□□□ -0.43
HNRNPC-231ENST00000557336 PI15O43692 258 aa12.39□□□□□ -0.43
HNRNPC-231ENST00000557336 SPATA31D3P0C874 917 aa12.39□□□□□ -0.43
HNRNPC-231ENST00000557336 XRCC6P12956 609 aaKnown RBP eCLIP12.39□□□□□ -0.433e-6■□□□□ 10.7
HNRNPC-231ENST00000557336 IGFBP6P24592 240 aaPredicted RBP12.39□□□□□ -0.43
HNRNPC-231ENST00000557336 NAB2Q15742 525 aa12.39□□□□□ -0.43
HNRNPC-231ENST00000557336 TSR1Q2NL82 804 aaKnown RBP12.39□□□□□ -0.43
HNRNPC-231ENST00000557336 CWF19L1Q69YN2 538 aaKnown RBP12.39□□□□□ -0.43
HNRNPC-231ENST00000557336 SPATA31D4Q6ZUB0 917 aa12.39□□□□□ -0.43
HNRNPC-231ENST00000557336 TMEM87AQ8NBN3 555 aa12.39□□□□□ -0.43
HNRNPC-231ENST00000557336 BSNDQ8WZ55 320 aa12.39□□□□□ -0.43
HNRNPC-231ENST00000557336 RHOBTB2Q9BYZ6 727 aa12.39□□□□□ -0.43
HNRNPC-231ENST00000557336 POLR3FQ9H1D9 316 aaPredicted RBP12.39□□□□□ -0.43
HNRNPC-231ENST00000557336 FZD8Q9H461 694 aa12.39□□□□□ -0.43
HNRNPC-231ENST00000557336 KCNK12Q9HB15 430 aa12.39□□□□□ -0.43
HNRNPC-231ENST00000557336 MAN1C1Q9NR34 630 aa12.39□□□□□ -0.43
HNRNPC-231ENST00000557336 KLK14Q9P0G3 267 aa12.39□□□□□ -0.43
HNRNPC-231ENST00000557336 STK39Q9UEW8 545 aa12.39□□□□□ -0.43
HNRNPC-231ENST00000557336 USP20Q9Y2K6 914 aa12.39□□□□□ -0.43
HNRNPC-231ENST00000557336 DMXL1Q9Y485 3027 aa12.38□□□□□ -0.43
HNRNPC-231ENST00000557336 PLXNA3P51805 1871 aa12.38□□□□□ -0.43
HNRNPC-231ENST00000557336 CCDC195A0A1B0GUA6 201 aa12.38□□□□□ -0.43
HNRNPC-231ENST00000557336 PTGESO14684 152 aa12.38□□□□□ -0.43
HNRNPC-231ENST00000557336 NARSO43776 548 aaKnown RBP12.38□□□□□ -0.43
HNRNPC-231ENST00000557336 USO1O60763 962 aaKnown RBP12.38□□□□□ -0.43
HNRNPC-231ENST00000557336 NPTXRO95502 500 aa12.38□□□□□ -0.43
HNRNPC-231ENST00000557336 URODP06132 367 aa12.38□□□□□ -0.43
HNRNPC-231ENST00000557336 GLUD2P49448 558 aa12.38□□□□□ -0.43
HNRNPC-231ENST00000557336 NEK4P51957 841 aa12.38□□□□□ -0.43
HNRNPC-231ENST00000557336 LSM11P83369 360 aaKnown RBP eCLIP12.38□□□□□ -0.43
HNRNPC-231ENST00000557336 GUCY1B3Q02153 619 aa12.38□□□□□ -0.43
HNRNPC-231ENST00000557336 TFDP1Q14186 410 aa12.38□□□□□ -0.43
HNRNPC-231ENST00000557336 CDCA2Q69YH5 1023 aaPredicted RBP12.38□□□□□ -0.43
HNRNPC-231ENST00000557336 SLC27A1Q6PCB7 646 aa12.38□□□□□ -0.43
HNRNPC-231ENST00000557336 CCDC149Q6ZUS6 474 aa12.38□□□□□ -0.43
HNRNPC-231ENST00000557336 MAEAQ7L5Y9 396 aa12.38□□□□□ -0.43
HNRNPC-231ENST00000557336 OTOP3Q7RTS5 596 aa12.38□□□□□ -0.43
HNRNPC-231ENST00000557336 RSAD2Q8WXG1 361 aa12.38□□□□□ -0.43
HNRNPC-231ENST00000557336 MYADMQ96S97 322 aa12.38□□□□□ -0.43
HNRNPC-231ENST00000557336 WDR6Q9NNW5 1121 aaKnown RBP12.38□□□□□ -0.43
HNRNPC-231ENST00000557336 EP300Q09472 2414 aaPredicted RBP12.38□□□□□ -0.43
HNRNPC-231ENST00000557336 PROB1E7EW31 1015 aa12.37□□□□□ -0.43
HNRNPC-231ENST00000557336 TGM5O43548 720 aa12.37□□□□□ -0.43
HNRNPC-231ENST00000557336 ADH1AP07327 375 aa12.37□□□□□ -0.43
HNRNPC-231ENST00000557336 RPL17P18621 184 aaKnown RBP12.37□□□□□ -0.43
HNRNPC-231ENST00000557336 CLCN5P51795 746 aa12.37□□□□□ -0.43
HNRNPC-231ENST00000557336 TDGQ13569 410 aa12.37□□□□□ -0.43
HNRNPC-231ENST00000557336 ECM1Q16610 540 aa12.37□□□□□ -0.43
HNRNPC-231ENST00000557336 FAM187BQ17R55 369 aa12.37□□□□□ -0.43
HNRNPC-231ENST00000557336 RTP2Q5QGT7 225 aa12.37□□□□□ -0.43
HNRNPC-231ENST00000557336 FUT10Q6P4F1 479 aa12.37□□□□□ -0.43
HNRNPC-231ENST00000557336 PALB2Q86YC2 1186 aa12.37□□□□□ -0.43
HNRNPC-231ENST00000557336 C4orf32Q8N8J7 132 aa12.37□□□□□ -0.43
HNRNPC-231ENST00000557336 ATOH1Q92858 354 aaPredicted RBP12.37□□□□□ -0.43
HNRNPC-231ENST00000557336 ACSF2Q96CM8 615 aaPredicted RBP12.37□□□□□ -0.43
HNRNPC-231ENST00000557336 CCDC113Q9H0I3 377 aa12.37□□□□□ -0.43
HNRNPC-231ENST00000557336 PDZD7Q9H5P4 517 aa12.37□□□□□ -0.43
HNRNPC-231ENST00000557336 POLD4Q9HCU8 107 aa12.37□□□□□ -0.43
HNRNPC-231ENST00000557336 BRMS1Q9HCU9 246 aa12.37□□□□□ -0.43
HNRNPC-231ENST00000557336 DOCK8Q8NF50 2099 aa12.36□□□□□ -0.43
HNRNPC-231ENST00000557336 ZMYM2Q9UBW7 1377 aa12.36□□□□□ -0.43
HNRNPC-231ENST00000557336 LRRIQ4A6NIV6 560 aa12.36□□□□□ -0.43
HNRNPC-231ENST00000557336 GLUD1P00367 558 aa12.36□□□□□ -0.43
HNRNPC-231ENST00000557336 C1RP00736 705 aa12.36□□□□□ -0.43
HNRNPC-231ENST00000557336 ATP2B1P20020 1258 aa12.36□□□□□ -0.43
HNRNPC-231ENST00000557336 MCM7P33993 719 aa12.36□□□□□ -0.43
HNRNPC-231ENST00000557336 NCBP1Q09161 790 aaKnown RBP12.36□□□□□ -0.43
HNRNPC-231ENST00000557336 GRIK3Q13003 919 aa12.36□□□□□ -0.43
HNRNPC-231ENST00000557336 EEF1DP3Q658K8 133 aa12.36□□□□□ -0.43
HNRNPC-231ENST00000557336 PRSS55Q6UWB4 352 aaPredicted RBP12.36□□□□□ -0.43
HNRNPC-231ENST00000557336 ASCL5Q7RTU5 278 aa12.36□□□□□ -0.43
HNRNPC-231ENST00000557336 GPR65Q8IYL9 337 aa12.36□□□□□ -0.43
HNRNPC-231ENST00000557336 HDAC7Q8WUI4 952 aa12.36□□□□□ -0.43
HNRNPC-231ENST00000557336 POLR3CQ9BUI4 534 aaPredicted RBP12.36□□□□□ -0.43
HNRNPC-231ENST00000557336 COLEC11Q9BWP8 271 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms