RNA–Protein interactions for RNA: ENST00000557201.5

HNRNPC-230, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-230ENST00000557201 XRCC6P12956 609 aaKnown RBP eCLIP11.88□□□□□ -0.513e-6■□□□□ 10.7
HNRNPC-230ENST00000557201 AKAP5P24588 427 aa11.88□□□□□ -0.51
HNRNPC-230ENST00000557201 GJB2P29033 226 aa11.88□□□□□ -0.51
HNRNPC-230ENST00000557201 NCBP1Q09161 790 aaKnown RBP11.88□□□□□ -0.51
HNRNPC-230ENST00000557201 GRIK3Q13003 919 aa11.88□□□□□ -0.51
HNRNPC-230ENST00000557201 TRIM29Q14134 588 aa11.88□□□□□ -0.51
HNRNPC-230ENST00000557201 BECN1Q14457 450 aa11.88□□□□□ -0.51
HNRNPC-230ENST00000557201 CALCRLQ16602 461 aa11.88□□□□□ -0.51
HNRNPC-230ENST00000557201 FUT10Q6P4F1 479 aa11.88□□□□□ -0.51
HNRNPC-230ENST00000557201 SLC27A1Q6PCB7 646 aa11.88□□□□□ -0.51
HNRNPC-230ENST00000557201 SPATA31D4Q6ZUB0 917 aa11.88□□□□□ -0.51
HNRNPC-230ENST00000557201 CDR2LQ86X02 465 aaPredicted RBP11.88□□□□□ -0.51
HNRNPC-230ENST00000557201 SIX5Q8N196 739 aa11.88□□□□□ -0.51
HNRNPC-230ENST00000557201 SLC44A3Q8N4M1 653 aa11.88□□□□□ -0.51
HNRNPC-230ENST00000557201 DTWD2Q8NBA8 298 aa11.88□□□□□ -0.51
HNRNPC-230ENST00000557201 SMG7Q92540 1137 aaKnown RBP11.88□□□□□ -0.51
HNRNPC-230ENST00000557201 NXPE3Q969Y0 559 aa11.88□□□□□ -0.51
HNRNPC-230ENST00000557201 RTP3Q9BQQ7 232 aa11.88□□□□□ -0.51
HNRNPC-230ENST00000557201 TTC12Q9H892 705 aaPredicted RBP11.88□□□□□ -0.51
HNRNPC-230ENST00000557201 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.88□□□□□ -0.513e-6■□□□□ 9.1
HNRNPC-230ENST00000557201 ADAM28Q9UKQ2 775 aa11.88□□□□□ -0.51
HNRNPC-230ENST00000557201 DOCK8Q8NF50 2099 aa11.87□□□□□ -0.51
HNRNPC-230ENST00000557201 A0A087WWV3 80 aa11.87□□□□□ -0.51
HNRNPC-230ENST00000557201 BTBD18B2RXH4 712 aa11.87□□□□□ -0.51
HNRNPC-230ENST00000557201 ANHXE9PGG2 379 aa11.87□□□□□ -0.51
HNRNPC-230ENST00000557201 NPTXRO95502 500 aa11.87□□□□□ -0.51
HNRNPC-230ENST00000557201 MYBP10242 640 aa11.87□□□□□ -0.51
HNRNPC-230ENST00000557201 GBP2P32456 591 aaPredicted RBP11.87□□□□□ -0.51
HNRNPC-230ENST00000557201 NAB2Q15742 525 aa11.87□□□□□ -0.51
HNRNPC-230ENST00000557201 FAM187BQ17R55 369 aa11.87□□□□□ -0.51
HNRNPC-230ENST00000557201 USP41Q3LFD5 358 aa11.87□□□□□ -0.51
HNRNPC-230ENST00000557201 CDCA2Q69YH5 1023 aaPredicted RBP11.87□□□□□ -0.51
HNRNPC-230ENST00000557201 PALB2Q86YC2 1186 aa11.87□□□□□ -0.51
HNRNPC-230ENST00000557201 PIGOQ8TEQ8 1089 aa11.87□□□□□ -0.51
HNRNPC-230ENST00000557201 STAMQ92783 540 aa11.87□□□□□ -0.51
HNRNPC-230ENST00000557201 C8orf76Q96K31 380 aa11.87□□□□□ -0.51
HNRNPC-230ENST00000557201 PAAF1Q9BRP4 392 aa11.87□□□□□ -0.51
HNRNPC-230ENST00000557201 APOL6Q9BWW8 343 aa11.87□□□□□ -0.51
HNRNPC-230ENST00000557201 PRKD2Q9BZL6 878 aa11.87□□□□□ -0.51
HNRNPC-230ENST00000557201 POLR3FQ9H1D9 316 aaPredicted RBP11.87□□□□□ -0.51
HNRNPC-230ENST00000557201 TMEM60Q9H2L4 133 aa11.87□□□□□ -0.51
HNRNPC-230ENST00000557201 FZD8Q9H461 694 aa11.87□□□□□ -0.51
HNRNPC-230ENST00000557201 GPRC5CQ9NQ84 441 aa11.87□□□□□ -0.51
HNRNPC-230ENST00000557201 ZDHHC7Q9NXF8 308 aa11.87□□□□□ -0.51
HNRNPC-230ENST00000557201 CACNG4Q9UBN1 327 aa11.87□□□□□ -0.51
HNRNPC-230ENST00000557201 TDRD15B5MCY1 1934 aaKnown RBP11.87□□□□□ -0.51
HNRNPC-230ENST00000557201 TTLL13PA6NNM8 815 aa11.86□□□□□ -0.51
HNRNPC-230ENST00000557201 NEMFO60524 1076 aa11.86□□□□□ -0.51
HNRNPC-230ENST00000557201 NR1I2O75469 434 aa11.86□□□□□ -0.51
HNRNPC-230ENST00000557201 SRFP11831 508 aa11.86□□□□□ -0.51
HNRNPC-230ENST00000557201 LAMP2P13473 410 aa11.86□□□□□ -0.51
HNRNPC-230ENST00000557201 RPL17P18621 184 aaKnown RBP11.86□□□□□ -0.51
HNRNPC-230ENST00000557201 PDCP20941 246 aa11.86□□□□□ -0.51
HNRNPC-230ENST00000557201 HTR4Q13639 388 aa11.86□□□□□ -0.51
HNRNPC-230ENST00000557201 ANGPT1Q15389 498 aa11.86□□□□□ -0.51
HNRNPC-230ENST00000557201 ELMSAN1Q6PJG2 1045 aa11.86□□□□□ -0.51
HNRNPC-230ENST00000557201 HACE1Q8IYU2 909 aa11.86□□□□□ -0.51
HNRNPC-230ENST00000557201 RIN2Q8WYP3 895 aaPredicted RBP11.86□□□□□ -0.51
HNRNPC-230ENST00000557201 RABGGTAQ92696 567 aa11.86□□□□□ -0.51
HNRNPC-230ENST00000557201 NKD2Q969F2 451 aaPredicted RBP11.86□□□□□ -0.51
HNRNPC-230ENST00000557201 PRIMPOLQ96LW4 560 aa11.86□□□□□ -0.51
HNRNPC-230ENST00000557201 TRIM6Q9C030 488 aaPredicted RBP11.86□□□□□ -0.51
HNRNPC-230ENST00000557201 CXCL16Q9H2A7 254 aa11.86□□□□□ -0.51
HNRNPC-230ENST00000557201 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.86□□□□□ -0.51
HNRNPC-230ENST00000557201 KLK14Q9P0G3 267 aa11.86□□□□□ -0.51
HNRNPC-230ENST00000557201 FBXL21Q9UKT6 434 aa11.86□□□□□ -0.51
HNRNPC-230ENST00000557201 MTCL1Q9Y4B5 1905 aaKnown RBP11.86□□□□□ -0.51
HNRNPC-230ENST00000557201 POTEMA6NI47 508 aa11.85□□□□□ -0.51
HNRNPC-230ENST00000557201 PTGESO14684 152 aa11.85□□□□□ -0.51
HNRNPC-230ENST00000557201 ZMYND10O75800 440 aa11.85□□□□□ -0.51
HNRNPC-230ENST00000557201 HSP90AA1P07900 732 aaKnown RBP11.85□□□□□ -0.51
HNRNPC-230ENST00000557201 CFHP08603 1231 aa11.85□□□□□ -0.51
HNRNPC-230ENST00000557201 PDIA4P13667 645 aaKnown RBP11.85□□□□□ -0.51
HNRNPC-230ENST00000557201 TXKP42681 527 aa11.85□□□□□ -0.51
HNRNPC-230ENST00000557201 CREMQ03060 361 aa11.85□□□□□ -0.51
HNRNPC-230ENST00000557201 HSP90AA2PQ14568 343 aaPredicted RBP11.85□□□□□ -0.51
HNRNPC-230ENST00000557201 SAFBQ15424 915 aaKnown RBP eCLIP11.85□□□□□ -0.512e-10■□□□□ 9.6
HNRNPC-230ENST00000557201 RTP2Q5QGT7 225 aa11.85□□□□□ -0.51
HNRNPC-230ENST00000557201 LARP1BQ659C4 914 aaKnown RBP11.85□□□□□ -0.51
HNRNPC-230ENST00000557201 PRSS55Q6UWB4 352 aaPredicted RBP11.85□□□□□ -0.51
HNRNPC-230ENST00000557201 CATSPER3Q86XQ3 398 aa11.85□□□□□ -0.51
HNRNPC-230ENST00000557201 DIS3L2Q8IYB7 885 aaKnown RBP11.85□□□□□ -0.51
HNRNPC-230ENST00000557201 BSNDQ8WZ55 320 aa11.85□□□□□ -0.51
HNRNPC-230ENST00000557201 CLSTN3Q9BQT9 956 aa11.85□□□□□ -0.51
HNRNPC-230ENST00000557201 PDZD7Q9H5P4 517 aa11.85□□□□□ -0.51
HNRNPC-230ENST00000557201 BRMS1Q9HCU9 246 aa11.85□□□□□ -0.51
HNRNPC-230ENST00000557201 DLGAP2Q9P1A6 1054 aa11.85□□□□□ -0.51
HNRNPC-230ENST00000557201 FBXW11Q9UKB1 542 aa11.85□□□□□ -0.51
HNRNPC-230ENST00000557201 FARP1Q9Y4F1 1045 aaPredicted RBP11.85□□□□□ -0.51
HNRNPC-230ENST00000557201 PTPRZ1P23471 2315 aaPredicted RBP11.84□□□□□ -0.51
HNRNPC-230ENST00000557201 USO1O60763 962 aaKnown RBP11.84□□□□□ -0.51
HNRNPC-230ENST00000557201 MED24O75448 989 aa11.84□□□□□ -0.51
HNRNPC-230ENST00000557201 TADA2AO75478 443 aa11.84□□□□□ -0.51
HNRNPC-230ENST00000557201 EDN1P05305 212 aa11.84□□□□□ -0.51
HNRNPC-230ENST00000557201 TUSC3Q13454 348 aa11.84□□□□□ -0.51
HNRNPC-230ENST00000557201 PHLDB3Q6NSJ2 640 aa11.84□□□□□ -0.51
HNRNPC-230ENST00000557201 GLYCTKQ8IVS8 523 aa11.84□□□□□ -0.51
HNRNPC-230ENST00000557201 ADSSL1Q8N142 457 aa11.84□□□□□ -0.51
HNRNPC-230ENST00000557201 LNX1Q8TBB1 728 aaPredicted RBP11.84□□□□□ -0.51
HNRNPC-230ENST00000557201 GPR152Q8TDT2 470 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms