RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 ARHGEF28Q8N1W1 1705 aaKnown RBP5.75□□□□□ -1.49
ATXN3-246ENST00000557030 AKAP8O43823 692 aaKnown RBP5.75□□□□□ -1.49
ATXN3-246ENST00000557030 CT47B1P0C2W7 299 aaPredicted RBP5.75□□□□□ -1.49
ATXN3-246ENST00000557030 C6P13671 934 aa5.75□□□□□ -1.49
ATXN3-246ENST00000557030 BPIP17213 487 aa5.75□□□□□ -1.49
ATXN3-246ENST00000557030 NCLP19338 710 aaKnown RBP5.75□□□□□ -1.49
ATXN3-246ENST00000557030 LSP1P33241 339 aa5.75□□□□□ -1.49
ATXN3-246ENST00000557030 FOXE3Q13461 319 aa5.75□□□□□ -1.49
ATXN3-246ENST00000557030 TCIRG1Q13488 830 aa5.75□□□□□ -1.49
ATXN3-246ENST00000557030 TERF2Q15554 542 aa5.75□□□□□ -1.49
ATXN3-246ENST00000557030 ZBTB41Q5SVQ8 909 aa5.75□□□□□ -1.49
ATXN3-246ENST00000557030 RNF187Q5TA31 235 aaPredicted RBP5.75□□□□□ -1.49
ATXN3-246ENST00000557030 BROXQ5VW32 411 aa5.75□□□□□ -1.49
ATXN3-246ENST00000557030 PLA2G15Q8NCC3 412 aa5.75□□□□□ -1.49
ATXN3-246ENST00000557030 IL17DQ8TAD2 202 aa5.75□□□□□ -1.49
ATXN3-246ENST00000557030 UBE2Q2Q8WVN8 375 aa5.75□□□□□ -1.49
ATXN3-246ENST00000557030 SLC5A5Q92911 643 aa5.75□□□□□ -1.49
ATXN3-246ENST00000557030 FERMT2Q96AC1 680 aa5.75□□□□□ -1.49
ATXN3-246ENST00000557030 FAM89AQ96GI7 184 aa5.75□□□□□ -1.49
ATXN3-246ENST00000557030 GPATCH3Q96I76 525 aa5.75□□□□□ -1.49
ATXN3-246ENST00000557030 SLC12A5Q9H2X9 1139 aa5.75□□□□□ -1.49
ATXN3-246ENST00000557030 DNAI1Q9UI46 699 aa5.75□□□□□ -1.49
ATXN3-246ENST00000557030 TMPRSS11EQ9UL52 423 aa5.75□□□□□ -1.49
ATXN3-246ENST00000557030 ISY1Q9ULR0 285 aaKnown RBP5.75□□□□□ -1.49
ATXN3-246ENST00000557030 SH3BP1Q9Y3L3 701 aa5.75□□□□□ -1.49
ATXN3-246ENST00000557030 RBM8AQ9Y5S9 174 aaKnown RBP5.75□□□□□ -1.49
ATXN3-246ENST00000557030 REREQ9P2R6 1566 aa5.75□□□□□ -1.49
ATXN3-246ENST00000557030 MYPNQ86TC9 1320 aa5.74□□□□□ -1.49
ATXN3-246ENST00000557030 AGLP35573 1532 aa5.74□□□□□ -1.49
ATXN3-246ENST00000557030 KRTAP23-1A1A580 65 aa5.74□□□□□ -1.49
ATXN3-246ENST00000557030 APAF1O14727 1248 aa5.74□□□□□ -1.49
ATXN3-246ENST00000557030 MTSS1O43312 755 aa5.74□□□□□ -1.49
ATXN3-246ENST00000557030 PCDH8O95206 1070 aa5.74□□□□□ -1.49
ATXN3-246ENST00000557030 AMHP03971 560 aa5.74□□□□□ -1.49
ATXN3-246ENST00000557030 PFKMP08237 780 aa5.74□□□□□ -1.49
ATXN3-246ENST00000557030 HNRNPLP14866 589 aaKnown RBP eCLIP5.74□□□□□ -1.49
ATXN3-246ENST00000557030 PTMSP20962 102 aa5.74□□□□□ -1.49
ATXN3-246ENST00000557030 ACRV1P26436 265 aa5.74□□□□□ -1.49
ATXN3-246ENST00000557030 USP39Q53GS9 565 aaKnown RBP5.74□□□□□ -1.49
ATXN3-246ENST00000557030 ESPNLQ6ZVH7 1005 aa5.74□□□□□ -1.49
ATXN3-246ENST00000557030 SKAP1Q86WV1 359 aa5.74□□□□□ -1.49
ATXN3-246ENST00000557030 LYSMD2Q8IV50 215 aa5.74□□□□□ -1.49
ATXN3-246ENST00000557030 SLC41A1Q8IVJ1 513 aa5.74□□□□□ -1.49
ATXN3-246ENST00000557030 WDR63Q8IWG1 891 aa5.74□□□□□ -1.49
ATXN3-246ENST00000557030 ANKRD53Q8N9V6 530 aa5.74□□□□□ -1.49
ATXN3-246ENST00000557030 EXTL1Q92935 676 aa5.74□□□□□ -1.49
ATXN3-246ENST00000557030 FAM126AQ9BYI3 521 aaPredicted RBP5.74□□□□□ -1.49
ATXN3-246ENST00000557030 VPS11Q9H270 941 aa5.74□□□□□ -1.49
ATXN3-246ENST00000557030 RWDD1Q9H446 243 aaPredicted RBP5.74□□□□□ -1.49
ATXN3-246ENST00000557030 ZNF703Q9H7S9 590 aaPredicted RBP5.74□□□□□ -1.49
ATXN3-246ENST00000557030 TLR9Q9NR96 1032 aa5.74□□□□□ -1.49
ATXN3-246ENST00000557030 SLC52A1Q9NWF4 448 aa5.74□□□□□ -1.49
ATXN3-246ENST00000557030 PRKAB1Q9Y478 270 aa5.74□□□□□ -1.49
ATXN3-246ENST00000557030 MYO5BQ9ULV0 1848 aa5.74□□□□□ -1.49
ATXN3-246ENST00000557030 USP32Q8NFA0 1604 aa5.74□□□□□ -1.49
ATXN3-246ENST00000557030 NSD3Q9BZ95 1437 aa5.74□□□□□ -1.49
ATXN3-246ENST00000557030 KDM1AO60341 852 aa5.73□□□□□ -1.49
ATXN3-246ENST00000557030 DNAJC6O75061 913 aa5.73□□□□□ -1.49
ATXN3-246ENST00000557030 TOX4O94842 621 aa5.73□□□□□ -1.49
ATXN3-246ENST00000557030 SEC24DO94855 1032 aaPredicted RBP5.73□□□□□ -1.49
ATXN3-246ENST00000557030 CLEC2LP0C7M8 214 aa5.73□□□□□ -1.49
ATXN3-246ENST00000557030 VSIG10L2P0DP72 767 aa5.73□□□□□ -1.49
ATXN3-246ENST00000557030 KIR2DL3P43628 341 aa5.73□□□□□ -1.49
ATXN3-246ENST00000557030 BPIFB4P59827 614 aa5.73□□□□□ -1.49
ATXN3-246ENST00000557030 TMPRSS15P98073 1019 aa5.73□□□□□ -1.49
ATXN3-246ENST00000557030 CCDC146Q8IYE0 955 aa5.73□□□□□ -1.49
ATXN3-246ENST00000557030 AFAP1L2Q8N4X5 818 aa5.73□□□□□ -1.49
ATXN3-246ENST00000557030 GCDHQ92947 438 aaPredicted RBP5.73□□□□□ -1.49
ATXN3-246ENST00000557030 RUNDC1Q96C34 613 aa5.73□□□□□ -1.49
ATXN3-246ENST00000557030 CFAP53Q96M91 514 aa5.73□□□□□ -1.49
ATXN3-246ENST00000557030 NOL10Q9BSC4 688 aaKnown RBP5.73□□□□□ -1.49
ATXN3-246ENST00000557030 ANO3Q9BYT9 981 aa5.73□□□□□ -1.49
ATXN3-246ENST00000557030 ENKD1Q9H0I2 346 aa5.73□□□□□ -1.49
ATXN3-246ENST00000557030 SPC25Q9HBM1 224 aa5.73□□□□□ -1.49
ATXN3-246ENST00000557030 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.73□□□□□ -1.49
ATXN3-246ENST00000557030 APOBEC2Q9Y235 224 aaKnown RBP5.73□□□□□ -1.49
ATXN3-246ENST00000557030 NOC2LQ9Y3T9 749 aaKnown RBP5.73□□□□□ -1.49
ATXN3-246ENST00000557030 USP19O94966 1318 aa5.73□□□□□ -1.49
ATXN3-246ENST00000557030 SHPRHQ149N8 1683 aa5.72□□□□□ -1.49
ATXN3-246ENST00000557030 GOLGA6L3A6NEY3 463 aa5.72□□□□□ -1.49
ATXN3-246ENST00000557030 EIF5BO60841 1220 aaKnown RBP5.72□□□□□ -1.49
ATXN3-246ENST00000557030 BCAR3O75815 825 aa5.72□□□□□ -1.49
ATXN3-246ENST00000557030 IGHDP01880 384 aa5.72□□□□□ -1.49
ATXN3-246ENST00000557030 HSPA1LP34931 641 aa5.72□□□□□ -1.49
ATXN3-246ENST00000557030 PTPROQ16827 1216 aa5.72□□□□□ -1.49
ATXN3-246ENST00000557030 GLIPR1L2Q4G1C9 344 aa5.72□□□□□ -1.49
ATXN3-246ENST00000557030 FRMD7Q6ZUT3 714 aa5.72□□□□□ -1.49
ATXN3-246ENST00000557030 LHFPL2Q6ZUX7 228 aa5.72□□□□□ -1.49
ATXN3-246ENST00000557030 KRT26Q7Z3Y9 468 aa5.72□□□□□ -1.49
ATXN3-246ENST00000557030 SLC16A11Q8NCK7 471 aa5.72□□□□□ -1.49
ATXN3-246ENST00000557030 CACTINQ8WUQ7 758 aaKnown RBP5.72□□□□□ -1.49
ATXN3-246ENST00000557030 RPL10LQ96L21 214 aaKnown RBP5.72□□□□□ -1.49
ATXN3-246ENST00000557030 FDXACB1Q9BRP7 624 aaPredicted RBP5.72□□□□□ -1.49
ATXN3-246ENST00000557030 SCAND2PQ9GZW5 306 aaPredicted RBP5.72□□□□□ -1.49
ATXN3-246ENST00000557030 MYH16Q9H6N6 1097 aa5.72□□□□□ -1.49
ATXN3-246ENST00000557030 CHMP5Q9NZZ3 219 aa5.72□□□□□ -1.49
ATXN3-246ENST00000557030 USP18Q9UMW8 372 aa5.72□□□□□ -1.49
ATXN3-246ENST00000557030 ZNF335Q9H4Z2 1342 aaPredicted RBP5.72□□□□□ -1.49
ATXN3-246ENST00000557030 NLRP1Q9C000 1473 aa5.71□□□□□ -1.49
ATXN3-246ENST00000557030 NSD2O96028 1365 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms