RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 DYNLL1P63167 89 aaKnown RBP5.13□□□□□ -1.59
SRP54-212ENST00000556992 SSRP1Q08945 709 aaKnown RBP5.13□□□□□ -1.59
SRP54-212ENST00000556992 PAK2Q13177 524 aa5.13□□□□□ -1.59
SRP54-212ENST00000556992 GRB10Q13322 594 aa5.13□□□□□ -1.59
SRP54-212ENST00000556992 TRIM29Q14134 588 aa5.13□□□□□ -1.59
SRP54-212ENST00000556992 WTAPQ15007 396 aa5.13□□□□□ -1.59
SRP54-212ENST00000556992 SLC15A2Q16348 729 aa5.13□□□□□ -1.59
SRP54-212ENST00000556992 RRP12Q5JTH9 1297 aaKnown RBP5.13□□□□□ -1.59
SRP54-212ENST00000556992 STYK1Q6J9G0 422 aa5.13□□□□□ -1.59
SRP54-212ENST00000556992 KIAA1211LQ6NV74 962 aa5.13□□□□□ -1.59
SRP54-212ENST00000556992 DPP8Q6V1X1 898 aaPredicted RBP5.13□□□□□ -1.59
SRP54-212ENST00000556992 CATIPQ7Z7H3 387 aa5.13□□□□□ -1.59
SRP54-212ENST00000556992 ADGRA1Q86SQ6 560 aa5.13□□□□□ -1.59
SRP54-212ENST00000556992 IQCA1Q86XH1 822 aa5.13□□□□□ -1.59
SRP54-212ENST00000556992 TTLL6Q8N841 843 aa5.13□□□□□ -1.59
SRP54-212ENST00000556992 FANCBQ8NB91 859 aa5.13□□□□□ -1.59
SRP54-212ENST00000556992 FBXO18Q8NFZ0 1043 aa5.13□□□□□ -1.59
SRP54-212ENST00000556992 COPS5Q92905 334 aa5.13□□□□□ -1.59
SRP54-212ENST00000556992 C8orf76Q96K31 380 aa5.13□□□□□ -1.59
SRP54-212ENST00000556992 SPATA32Q96LK8 384 aa5.13□□□□□ -1.59
SRP54-212ENST00000556992 EYA3Q99504 573 aa5.13□□□□□ -1.59
SRP54-212ENST00000556992 KLC2Q9H0B6 622 aa5.13□□□□□ -1.59
SRP54-212ENST00000556992 VPS11Q9H270 941 aa5.13□□□□□ -1.59
SRP54-212ENST00000556992 GRPEL1Q9HAV7 217 aa5.13□□□□□ -1.59
SRP54-212ENST00000556992 LY9Q9HBG7 655 aa5.13□□□□□ -1.59
SRP54-212ENST00000556992 CD248Q9HCU0 757 aa5.13□□□□□ -1.59
SRP54-212ENST00000556992 ORC3Q9UBD5 711 aaPredicted RBP5.13□□□□□ -1.59
SRP54-212ENST00000556992 ARPP21Q9UBL0 812 aaPredicted RBP5.13□□□□□ -1.59
SRP54-212ENST00000556992 POLLQ9UGP5 575 aa5.13□□□□□ -1.59
SRP54-212ENST00000556992 FBXL7Q9UJT9 491 aa5.13□□□□□ -1.59
SRP54-212ENST00000556992 ING1Q9UK53 422 aaPredicted RBP5.13□□□□□ -1.59
SRP54-212ENST00000556992 RCOR1Q9UKL0 485 aa5.13□□□□□ -1.59
SRP54-212ENST00000556992 TSC22D4Q9Y3Q8 395 aa5.13□□□□□ -1.59
SRP54-212ENST00000556992 ARFGEF2Q9Y6D5 1785 aa5.13□□□□□ -1.59
SRP54-212ENST00000556992 ZNF831Q5JPB2 1677 aa5.12□□□□□ -1.59
SRP54-212ENST00000556992 THSD7AQ9UPZ6 1657 aa5.12□□□□□ -1.59
SRP54-212ENST00000556992 GPR75-ASB3A0A0A6YYF3 556 aa5.12□□□□□ -1.59
SRP54-212ENST00000556992 NPEPPSL1A6NEC2 478 aa5.12□□□□□ -1.59
SRP54-212ENST00000556992 GOLGA8AA7E2F4 631 aa5.12□□□□□ -1.59
SRP54-212ENST00000556992 FIBPO43427 364 aa5.12□□□□□ -1.59
SRP54-212ENST00000556992 RANBP6O60518 1105 aaKnown RBP5.12□□□□□ -1.59
SRP54-212ENST00000556992 ZNF28P17035 718 aa5.12□□□□□ -1.59
SRP54-212ENST00000556992 IFNAR1P17181 557 aa5.12□□□□□ -1.59
SRP54-212ENST00000556992 PRDX5P30044 214 aa5.12□□□□□ -1.59
SRP54-212ENST00000556992 ACVRL1P37023 503 aa5.12□□□□□ -1.59
SRP54-212ENST00000556992 MLLT6P55198 1093 aaPredicted RBP5.12□□□□□ -1.59
SRP54-212ENST00000556992 EIF6P56537 245 aaKnown RBP5.12□□□□□ -1.59
SRP54-212ENST00000556992 CYP4F3Q08477 520 aa5.12□□□□□ -1.59
SRP54-212ENST00000556992 RESTQ13127 1097 aa5.12□□□□□ -1.59
SRP54-212ENST00000556992 SAFBQ15424 915 aaKnown RBP eCLIP5.12□□□□□ -1.59
SRP54-212ENST00000556992 CRB2Q5IJ48 1285 aa5.12□□□□□ -1.59
SRP54-212ENST00000556992 CCDC183Q5T5S1 534 aa5.12□□□□□ -1.59
SRP54-212ENST00000556992 C12orf60Q5U649 245 aa5.12□□□□□ -1.59
SRP54-212ENST00000556992 APOA5Q6Q788 366 aa5.12□□□□□ -1.59
SRP54-212ENST00000556992 BRAPQ7Z569 592 aa5.12□□□□□ -1.59
SRP54-212ENST00000556992 ZC3H18Q86VM9 953 aaKnown RBP5.12□□□□□ -1.59
SRP54-212ENST00000556992 DGKHQ86XP1 1220 aa5.12□□□□□ -1.59
SRP54-212ENST00000556992 C2CD5Q86YS7 1000 aa5.12□□□□□ -1.59
SRP54-212ENST00000556992 FAM126BQ8IXS8 530 aa5.12□□□□□ -1.59
SRP54-212ENST00000556992 CRACR2BQ8N4Y2 399 aaPredicted RBP5.12□□□□□ -1.59
SRP54-212ENST00000556992 ZNF384Q8TF68 577 aa5.12□□□□□ -1.59
SRP54-212ENST00000556992 SDR42E1Q8WUS8 393 aa5.12□□□□□ -1.59
SRP54-212ENST00000556992 PPP1R14AQ96A00 147 aa5.12□□□□□ -1.59
SRP54-212ENST00000556992 MBD6Q96DN6 1003 aa5.12□□□□□ -1.59
SRP54-212ENST00000556992 RCC1LQ96I51 464 aaKnown RBP5.12□□□□□ -1.59
SRP54-212ENST00000556992 INCENPQ9NQS7 918 aa5.12□□□□□ -1.59
SRP54-212ENST00000556992 MCM9Q9NXL9 1143 aa5.12□□□□□ -1.59
SRP54-212ENST00000556992 AATFQ9NY61 560 aaKnown RBP eCLIP5.12□□□□□ -1.59
SRP54-212ENST00000556992 TMEFF2Q9UIK5 374 aaPredicted RBP5.12□□□□□ -1.59
SRP54-212ENST00000556992 HS3ST3A1Q9Y663 406 aa5.12□□□□□ -1.59
SRP54-212ENST00000556992 FAM205AQ6ZU69 1335 aa5.12□□□□□ -1.59
SRP54-212ENST00000556992 CICQ96RK0 1608 aaPredicted RBP5.12□□□□□ -1.59
SRP54-212ENST00000556992 TJP1Q07157 1748 aa5.11□□□□□ -1.59
SRP54-212ENST00000556992 NUP188Q5SRE5 1749 aa5.11□□□□□ -1.59
SRP54-212ENST00000556992 TRBV23OR9-2A0A075B6M9 112 aa5.11□□□□□ -1.59
SRP54-212ENST00000556992 XBP1P17861 261 aa5.11□□□□□ -1.59
SRP54-212ENST00000556992 KIF5BP33176 963 aa5.11□□□□□ -1.59
SRP54-212ENST00000556992 AKAP17AQ02040 695 aaKnown RBP5.11□□□□□ -1.59
SRP54-212ENST00000556992 KLF10Q13118 480 aa5.11□□□□□ -1.59
SRP54-212ENST00000556992 SF3A1Q15459 793 aaKnown RBP5.11□□□□□ -1.59
SRP54-212ENST00000556992 MFSD14BQ5SR56 506 aa5.11□□□□□ -1.59
SRP54-212ENST00000556992 PHF19Q5T6S3 580 aa5.11□□□□□ -1.59
SRP54-212ENST00000556992 IFIT1BQ5T764 474 aaKnown RBP5.11□□□□□ -1.59
SRP54-212ENST00000556992 LRSAM1Q6UWE0 723 aa5.11□□□□□ -1.59
SRP54-212ENST00000556992 GAS2L3Q86XJ1 694 aa5.11□□□□□ -1.59
SRP54-212ENST00000556992 ZNF444Q8N0Y2 327 aaPredicted RBP5.11□□□□□ -1.59
SRP54-212ENST00000556992 SUPT20HQ8NEM7 779 aa5.11□□□□□ -1.59
SRP54-212ENST00000556992 LEO1Q8WVC0 666 aaPredicted RBP5.11□□□□□ -1.59
SRP54-212ENST00000556992 SEC14L1Q92503 715 aa5.11□□□□□ -1.59
SRP54-212ENST00000556992 ANKS1AQ92625 1134 aa5.11□□□□□ -1.59
SRP54-212ENST00000556992 ZNF622Q969S3 477 aaKnown RBP eCLIP5.11□□□□□ -1.592e-11■□□□□ 10.8
SRP54-212ENST00000556992 CHAMP1Q96JM3 812 aa5.11□□□□□ -1.59
SRP54-212ENST00000556992 MMP19Q99542 508 aa5.11□□□□□ -1.59
SRP54-212ENST00000556992 MAP3K14Q99558 947 aa5.11□□□□□ -1.59
SRP54-212ENST00000556992 YIPF4Q9BSR8 244 aa5.11□□□□□ -1.59
SRP54-212ENST00000556992 ALG1Q9BT22 464 aa5.11□□□□□ -1.59
SRP54-212ENST00000556992 TSPY26PQ9H489 355 aa5.11□□□□□ -1.59
SRP54-212ENST00000556992 SPON1Q9HCB6 807 aa5.11□□□□□ -1.59
SRP54-212ENST00000556992 TCP11L1Q9NUJ3 509 aa5.11□□□□□ -1.59
SRP54-212ENST00000556992 RBM28Q9NW13 759 aaKnown RBP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms