RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 VPS52Q8N1B4 723 aa11.39□□□□□ -0.59
SNX6-208ENST00000556712 MYCT1Q8N699 235 aa11.39□□□□□ -0.59
SNX6-208ENST00000556712 PPP2R3CQ969Q6 453 aa11.39□□□□□ -0.59
SNX6-208ENST00000556712 ZBTB45Q96K62 511 aaPredicted RBP11.39□□□□□ -0.59
SNX6-208ENST00000556712 PAAF1Q9BRP4 392 aa11.39□□□□□ -0.59
SNX6-208ENST00000556712 TMEM175Q9BSA9 504 aa11.39□□□□□ -0.59
SNX6-208ENST00000556712 TLE6Q9H808 572 aa11.39□□□□□ -0.59
SNX6-208ENST00000556712 PARVGQ9HBI0 331 aa11.39□□□□□ -0.59
SNX6-208ENST00000556712 LARSQ9P2J5 1176 aaKnown RBP11.39□□□□□ -0.59
SNX6-208ENST00000556712 KANSL3Q9P2N6 904 aa11.39□□□□□ -0.59
SNX6-208ENST00000556712 STK17AQ9UEE5 414 aa11.39□□□□□ -0.59
SNX6-208ENST00000556712 PUF60Q9UHX1 559 aaKnown RBP11.39□□□□□ -0.59
SNX6-208ENST00000556712 FAN1Q9Y2M0 1017 aa11.39□□□□□ -0.59
SNX6-208ENST00000556712 ZDHHC9Q9Y397 364 aa11.39□□□□□ -0.59
SNX6-208ENST00000556712 RBM19Q9Y4C8 960 aaKnown RBP11.39□□□□□ -0.59
SNX6-208ENST00000556712 ZMYM2Q9UBW7 1377 aa11.39□□□□□ -0.59
SNX6-208ENST00000556712 TCHHQ07283 1943 aa11.39□□□□□ -0.59
SNX6-208ENST00000556712 C2orf71A6NGG8 1288 aa11.38□□□□□ -0.59
SNX6-208ENST00000556712 CASTOR2A6NHX0 329 aa11.38□□□□□ -0.59
SNX6-208ENST00000556712 PPP6R2O75170 966 aa11.38□□□□□ -0.59
SNX6-208ENST00000556712 PROZP22891 400 aa11.38□□□□□ -0.59
SNX6-208ENST00000556712 DDIT3P35638 169 aa11.38□□□□□ -0.59
SNX6-208ENST00000556712 STRN3Q13033 797 aa11.38□□□□□ -0.59
SNX6-208ENST00000556712 ADAM15Q13444 863 aa11.38□□□□□ -0.59
SNX6-208ENST00000556712 PTCRAQ6ISU1 281 aaPredicted RBP11.38□□□□□ -0.59
SNX6-208ENST00000556712 SHC4Q6S5L8 630 aa11.38□□□□□ -0.59
SNX6-208ENST00000556712 MPZL3Q6UWV2 235 aa11.38□□□□□ -0.59
SNX6-208ENST00000556712 CCDC73Q6ZRK6 1079 aa11.38□□□□□ -0.59
SNX6-208ENST00000556712 HAUS6Q7Z4H7 955 aa11.38□□□□□ -0.59
SNX6-208ENST00000556712 DDX53Q86TM3 631 aaKnown RBP11.38□□□□□ -0.59
SNX6-208ENST00000556712 SFR1Q86XK3 245 aa11.38□□□□□ -0.59
SNX6-208ENST00000556712 EFHBQ8N7U6 833 aa11.38□□□□□ -0.59
SNX6-208ENST00000556712 HASPINQ8TF76 798 aa11.38□□□□□ -0.59
SNX6-208ENST00000556712 STAMQ92783 540 aa11.38□□□□□ -0.59
SNX6-208ENST00000556712 BICD1Q96G01 975 aa11.38□□□□□ -0.59
SNX6-208ENST00000556712 FIZ1Q96SL8 496 aa11.38□□□□□ -0.59
SNX6-208ENST00000556712 UHRF1Q96T88 793 aaPredicted RBP11.38□□□□□ -0.59
SNX6-208ENST00000556712 NTPCRQ9BSD7 190 aaKnown RBP11.38□□□□□ -0.59
SNX6-208ENST00000556712 HAPLN2Q9GZV7 340 aa11.38□□□□□ -0.59
SNX6-208ENST00000556712 PTPRHQ9HD43 1115 aa11.38□□□□□ -0.59
SNX6-208ENST00000556712 CLEC1BQ9P126 229 aa11.38□□□□□ -0.59
SNX6-208ENST00000556712 VWA8A3KMH1 1905 aa11.38□□□□□ -0.59
SNX6-208ENST00000556712 MEFVO15553 781 aaPredicted RBP11.37□□□□□ -0.59
SNX6-208ENST00000556712 TRAK2O60296 914 aa11.37□□□□□ -0.59
SNX6-208ENST00000556712 CUTAO60888 179 aa11.37□□□□□ -0.59
SNX6-208ENST00000556712 BRD1O95696 1058 aa11.37□□□□□ -0.59
SNX6-208ENST00000556712 GRM5P41594 1212 aa11.37□□□□□ -0.59
SNX6-208ENST00000556712 NOLC1Q14978 699 aaKnown RBP eCLIP11.37□□□□□ -0.59
SNX6-208ENST00000556712 PTPN14Q15678 1187 aa11.37□□□□□ -0.59
SNX6-208ENST00000556712 NAB2Q15742 525 aa11.37□□□□□ -0.59
SNX6-208ENST00000556712 E2F4Q16254 413 aa11.37□□□□□ -0.59
SNX6-208ENST00000556712 ZC2HC1CQ53FD0 456 aaPredicted RBP11.37□□□□□ -0.59
SNX6-208ENST00000556712 AXDND1Q5T1B0 1012 aaPredicted RBP11.37□□□□□ -0.59
SNX6-208ENST00000556712 PDE12Q6L8Q7 609 aaKnown RBP11.37□□□□□ -0.59
SNX6-208ENST00000556712 SLC39A4Q6P5W5 647 aa11.37□□□□□ -0.59
SNX6-208ENST00000556712 SV2BQ7L1I2 683 aa11.37□□□□□ -0.59
SNX6-208ENST00000556712 TAS1R1Q7RTX1 841 aa11.37□□□□□ -0.59
SNX6-208ENST00000556712 FAM178BQ8IXR5 827 aa11.37□□□□□ -0.59
SNX6-208ENST00000556712 TMEM130Q8N3G9 435 aa11.37□□□□□ -0.59
SNX6-208ENST00000556712 DDX12PQ92771 950 aa11.37□□□□□ -0.59
SNX6-208ENST00000556712 DNAJC19Q96DA6 116 aa11.37□□□□□ -0.59
SNX6-208ENST00000556712 B3GALT6Q96L58 329 aa11.37□□□□□ -0.59
SNX6-208ENST00000556712 TCHPQ9BT92 498 aa11.37□□□□□ -0.59
SNX6-208ENST00000556712 IKZF4Q9H2S9 585 aa11.37□□□□□ -0.59
SNX6-208ENST00000556712 GOLGA2P5Q9HBQ8 144 aa11.37□□□□□ -0.59
SNX6-208ENST00000556712 NGRNQ9NPE2 291 aaKnown RBP11.37□□□□□ -0.59
SNX6-208ENST00000556712 TBC1D7Q9P0N9 293 aa11.37□□□□□ -0.59
SNX6-208ENST00000556712 TBX20Q9UMR3 447 aa11.37□□□□□ -0.59
SNX6-208ENST00000556712 ANK1P16157 1881 aa11.37□□□□□ -0.59
SNX6-208ENST00000556712 A0A0C4DFX4 3053 aa11.37□□□□□ -0.59
SNX6-208ENST00000556712 GRXCR2A6NFK2 248 aa11.36□□□□□ -0.59
SNX6-208ENST00000556712 TISP43B9A030 160 aa11.36□□□□□ -0.59
SNX6-208ENST00000556712 C2CD2LO14523 706 aa11.36□□□□□ -0.59
SNX6-208ENST00000556712 HNRNPDLO14979 420 aaKnown RBP11.36□□□□□ -0.59
SNX6-208ENST00000556712 NCK2O43639 380 aa11.36□□□□□ -0.59
SNX6-208ENST00000556712 KIF4AO95239 1232 aa11.36□□□□□ -0.59
SNX6-208ENST00000556712 CXCL14O95715 111 aa11.36□□□□□ -0.59
SNX6-208ENST00000556712 SOD2P04179 222 aa11.36□□□□□ -0.59
SNX6-208ENST00000556712 ALDH2P05091 517 aa11.36□□□□□ -0.59
SNX6-208ENST00000556712 THP07101 528 aa11.36□□□□□ -0.59
SNX6-208ENST00000556712 CTSAP10619 480 aa11.36□□□□□ -0.59
SNX6-208ENST00000556712 MCF2P10911 925 aa11.36□□□□□ -0.59
SNX6-208ENST00000556712 PDIA4P13667 645 aaKnown RBP11.36□□□□□ -0.59
SNX6-208ENST00000556712 MATR3P43243 847 aaKnown RBP eCLIP11.36□□□□□ -0.59
SNX6-208ENST00000556712 ME1P48163 572 aa11.36□□□□□ -0.59
SNX6-208ENST00000556712 TUSC3Q13454 348 aa11.36□□□□□ -0.59
SNX6-208ENST00000556712 ZBTB41Q5SVQ8 909 aa11.36□□□□□ -0.59
SNX6-208ENST00000556712 APBB1IPQ7Z5R6 666 aaPredicted RBP11.36□□□□□ -0.59
SNX6-208ENST00000556712 MRPL43Q8N983 215 aaKnown RBP11.36□□□□□ -0.59
SNX6-208ENST00000556712 KCNG4Q8TDN1 519 aa11.36□□□□□ -0.59
SNX6-208ENST00000556712 DHX58Q96C10 678 aa11.36□□□□□ -0.59
SNX6-208ENST00000556712 MSLNLQ96KJ4 702 aa11.36□□□□□ -0.59
SNX6-208ENST00000556712 SNX27Q96L92 541 aa11.36□□□□□ -0.59
SNX6-208ENST00000556712 CDCA3Q99618 268 aaPredicted RBP11.36□□□□□ -0.59
SNX6-208ENST00000556712 HERC2P3Q9BVR0 1158 aa11.36□□□□□ -0.59
SNX6-208ENST00000556712 CCDC94Q9BW85 323 aaPredicted RBP11.36□□□□□ -0.59
SNX6-208ENST00000556712 APOL5Q9BWW9 433 aa11.36□□□□□ -0.59
SNX6-208ENST00000556712 FGFBP2Q9BYJ0 223 aa11.36□□□□□ -0.59
SNX6-208ENST00000556712 CD207Q9UJ71 328 aa11.36□□□□□ -0.59
SNX6-208ENST00000556712 CDH22Q9UJ99 828 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms