RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 RABL6Q3YEC7 729 aaPredicted RBP5.7□□□□□ -1.5
ATXN3-243ENST00000556671 PAN2Q504Q3 1202 aaKnown RBP5.7□□□□□ -1.5
ATXN3-243ENST00000556671 RBM12BQ8IXT5 1001 aaKnown RBP5.7□□□□□ -1.5
ATXN3-243ENST00000556671 KBTBD2Q8IY47 623 aa5.7□□□□□ -1.5
ATXN3-243ENST00000556671 IFNL3Q8IZI9 196 aa5.7□□□□□ -1.5
ATXN3-243ENST00000556671 CNTROBQ8N137 903 aa5.7□□□□□ -1.5
ATXN3-243ENST00000556671 LRRC47Q8N1G4 583 aaKnown RBP5.7□□□□□ -1.5
ATXN3-243ENST00000556671 CHST13Q8NET6 341 aa5.7□□□□□ -1.5
ATXN3-243ENST00000556671 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.7□□□□□ -1.5
ATXN3-243ENST00000556671 IGDCC4Q8TDY8 1250 aa5.7□□□□□ -1.5
ATXN3-243ENST00000556671 ZNF669Q96BR6 464 aaPredicted RBP5.7□□□□□ -1.5
ATXN3-243ENST00000556671 DCPSQ96C86 337 aaKnown RBP5.7□□□□□ -1.5
ATXN3-243ENST00000556671 FAM84BQ96KN1 310 aaPredicted RBP5.7□□□□□ -1.5
ATXN3-243ENST00000556671 TMPRSS5Q9H3S3 457 aa5.7□□□□□ -1.5
ATXN3-243ENST00000556671 ADARB2Q9NS39 739 aaKnown RBP5.7□□□□□ -1.5
ATXN3-243ENST00000556671 GNL3LQ9NVN8 582 aaKnown RBP5.7□□□□□ -1.5
ATXN3-243ENST00000556671 HDAC9Q9UKV0 1011 aa5.7□□□□□ -1.5
ATXN3-243ENST00000556671 SCAF8Q9UPN6 1271 aaKnown RBP5.7□□□□□ -1.5
ATXN3-243ENST00000556671 MYH7P12883 1935 aa5.7□□□□□ -1.5
ATXN3-243ENST00000556671 MED23Q9ULK4 1368 aa5.69□□□□□ -1.5
ATXN3-243ENST00000556671 NKRFO15226 690 aaKnown RBP eCLIP5.69□□□□□ -1.5
ATXN3-243ENST00000556671 MATN3O15232 486 aa5.69□□□□□ -1.5
ATXN3-243ENST00000556671 HMMRO75330 724 aa5.69□□□□□ -1.5
ATXN3-243ENST00000556671 LTFP02788 710 aa5.69□□□□□ -1.5
ATXN3-243ENST00000556671 SOD2P04179 222 aa5.69□□□□□ -1.5
ATXN3-243ENST00000556671 COL6A2P12110 1019 aa5.69□□□□□ -1.5
ATXN3-243ENST00000556671 PPP2CBP62714 309 aa5.69□□□□□ -1.5
ATXN3-243ENST00000556671 PPP2CAP67775 309 aa5.69□□□□□ -1.5
ATXN3-243ENST00000556671 FSTL1Q12841 308 aa5.69□□□□□ -1.5
ATXN3-243ENST00000556671 IFRD2Q12894 506 aaPredicted RBP5.69□□□□□ -1.5
ATXN3-243ENST00000556671 PUM3Q15397 648 aaKnown RBP5.69□□□□□ -1.5
ATXN3-243ENST00000556671 STRIP1Q5VSL9 837 aa5.69□□□□□ -1.5
ATXN3-243ENST00000556671 YOD1Q5VVQ6 348 aaPredicted RBP5.69□□□□□ -1.5
ATXN3-243ENST00000556671 USP50Q70EL3 339 aaPredicted RBP5.69□□□□□ -1.5
ATXN3-243ENST00000556671 ATG9AQ7Z3C6 839 aa5.69□□□□□ -1.5
ATXN3-243ENST00000556671 LPIN2Q92539 896 aa5.69□□□□□ -1.5
ATXN3-243ENST00000556671 DVL3Q92997 716 aaPredicted RBP5.69□□□□□ -1.5
ATXN3-243ENST00000556671 CCDC8Q9H0W5 538 aaPredicted RBP5.69□□□□□ -1.5
ATXN3-243ENST00000556671 BARX1Q9HBU1 254 aaPredicted RBP5.69□□□□□ -1.5
ATXN3-243ENST00000556671 ST6GALNAC2Q9UJ37 374 aa5.69□□□□□ -1.5
ATXN3-243ENST00000556671 ADAM29Q9UKF5 820 aa5.69□□□□□ -1.5
ATXN3-243ENST00000556671 EXOC6BQ9Y2D4 811 aa5.69□□□□□ -1.5
ATXN3-243ENST00000556671 TELO2Q9Y4R8 837 aa5.69□□□□□ -1.5
ATXN3-243ENST00000556671 NUB1Q9Y5A7 615 aa5.69□□□□□ -1.5
ATXN3-243ENST00000556671 ADAMTSL1Q8N6G6 1762 aa5.69□□□□□ -1.5
ATXN3-243ENST00000556671 UTRNP46939 3433 aa5.69□□□□□ -1.5
ATXN3-243ENST00000556671 ZNF646O15015 1829 aaPredicted RBP5.69□□□□□ -1.5
ATXN3-243ENST00000556671 MYH1P12882 1939 aa5.68□□□□□ -1.5
ATXN3-243ENST00000556671 MYH8P13535 1937 aa5.68□□□□□ -1.5
ATXN3-243ENST00000556671 BLACEA4D250 179 aa5.68□□□□□ -1.5
ATXN3-243ENST00000556671 TRAF5O00463 557 aa5.68□□□□□ -1.5
ATXN3-243ENST00000556671 GPR42O15529 346 aa5.68□□□□□ -1.5
ATXN3-243ENST00000556671 CIAO1O76071 339 aa5.68□□□□□ -1.5
ATXN3-243ENST00000556671 KLHL18O94889 574 aa5.68□□□□□ -1.5
ATXN3-243ENST00000556671 CHGBP05060 677 aa5.68□□□□□ -1.5
ATXN3-243ENST00000556671 HSPA6P17066 643 aa5.68□□□□□ -1.5
ATXN3-243ENST00000556671 RPS12P25398 132 aaKnown RBP5.68□□□□□ -1.5
ATXN3-243ENST00000556671 ADORA1P30542 326 aa5.68□□□□□ -1.5
ATXN3-243ENST00000556671 EPHA5P54756 1037 aa5.68□□□□□ -1.5
ATXN3-243ENST00000556671 RRP1P56182 461 aaKnown RBP5.68□□□□□ -1.5
ATXN3-243ENST00000556671 PRKG1Q13976 671 aa5.68□□□□□ -1.5
ATXN3-243ENST00000556671 DLGAP5Q15398 846 aa5.68□□□□□ -1.5
ATXN3-243ENST00000556671 SMAD2Q15796 467 aaKnown RBP5.68□□□□□ -1.5
ATXN3-243ENST00000556671 MFSD14BQ5SR56 506 aa5.68□□□□□ -1.5
ATXN3-243ENST00000556671 TTC39AQ5SRH9 613 aa5.68□□□□□ -1.5
ATXN3-243ENST00000556671 PHF19Q5T6S3 580 aa5.68□□□□□ -1.5
ATXN3-243ENST00000556671 DLK2Q6UY11 383 aa5.68□□□□□ -1.5
ATXN3-243ENST00000556671 ARHGEF18Q6ZSZ5 1173 aa5.68□□□□□ -1.5
ATXN3-243ENST00000556671 AGBL3Q8NEM8 1001 aa5.68□□□□□ -1.5
ATXN3-243ENST00000556671 NUDT10Q8NFP7 164 aa5.68□□□□□ -1.5
ATXN3-243ENST00000556671 DPF2Q92785 391 aa5.68□□□□□ -1.5
ATXN3-243ENST00000556671 NUDT11Q96G61 164 aa5.68□□□□□ -1.5
ATXN3-243ENST00000556671 KCNJ15Q99712 375 aa5.68□□□□□ -1.5
ATXN3-243ENST00000556671 GLIS2Q9BZE0 524 aaPredicted RBP5.68□□□□□ -1.5
ATXN3-243ENST00000556671 MYOZ2Q9NPC6 264 aa5.68□□□□□ -1.5
ATXN3-243ENST00000556671 ABCF2Q9UG63 623 aa5.68□□□□□ -1.5
ATXN3-243ENST00000556671 DSEQ9UL01 958 aa5.68□□□□□ -1.5
ATXN3-243ENST00000556671 ABT1Q9ULW3 272 aaKnown RBP5.68□□□□□ -1.5
ATXN3-243ENST00000556671 MSRB2Q9Y3D2 182 aa5.68□□□□□ -1.5
ATXN3-243ENST00000556671 SNED1Q8TER0 1413 aa5.67□□□□□ -1.5
ATXN3-243ENST00000556671 A0A1B0GUL7 405 aa5.67□□□□□ -1.5
ATXN3-243ENST00000556671 NPEPPSL1A6NEC2 478 aa5.67□□□□□ -1.5
ATXN3-243ENST00000556671 FAM47E-STBD1D6RA91 191 aa5.67□□□□□ -1.5
ATXN3-243ENST00000556671 CKMP06732 381 aa5.67□□□□□ -1.5
ATXN3-243ENST00000556671 IL1R1P14778 569 aa5.67□□□□□ -1.5
ATXN3-243ENST00000556671 PHKA1P46020 1223 aa5.67□□□□□ -1.5
ATXN3-243ENST00000556671 ICAM4Q14773 271 aa5.67□□□□□ -1.5
ATXN3-243ENST00000556671 SKIDA1Q1XH10 827 aa5.67□□□□□ -1.5
ATXN3-243ENST00000556671 CFAP100Q494V2 611 aa5.67□□□□□ -1.5
ATXN3-243ENST00000556671 CCDC158Q5M9N0 1113 aa5.67□□□□□ -1.5
ATXN3-243ENST00000556671 DACT2Q5SW24 774 aa5.67□□□□□ -1.5
ATXN3-243ENST00000556671 CD276Q5ZPR3 534 aa5.67□□□□□ -1.5
ATXN3-243ENST00000556671 CEP85Q6P2H3 762 aa5.67□□□□□ -1.5
ATXN3-243ENST00000556671 KCTD1Q719H9 257 aa5.67□□□□□ -1.5
ATXN3-243ENST00000556671 DPH6Q7L8W6 267 aa5.67□□□□□ -1.5
ATXN3-243ENST00000556671 KRT26Q7Z3Y9 468 aa5.67□□□□□ -1.5
ATXN3-243ENST00000556671 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.67□□□□□ -1.5
ATXN3-243ENST00000556671 AACSQ86V21 672 aa5.67□□□□□ -1.5
ATXN3-243ENST00000556671 RPAP2Q8IXW5 612 aaPredicted RBP5.67□□□□□ -1.5
ATXN3-243ENST00000556671 DNERQ8NFT8 737 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms