RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 TNFRSF8P28908 595 aa10.91□□□□□ -0.66
TMEM260-211ENST00000556648 TCF7P36402 384 aaPredicted RBP10.91□□□□□ -0.66
TMEM260-211ENST00000556648 NAMPTP43490 491 aa10.91□□□□□ -0.66
TMEM260-211ENST00000556648 MARCKSL1P49006 195 aa10.91□□□□□ -0.66
TMEM260-211ENST00000556648 AARSP49588 968 aaKnown RBP eCLIP10.91□□□□□ -0.66
TMEM260-211ENST00000556648 ZNF211Q13398 564 aaPredicted RBP10.91□□□□□ -0.66
TMEM260-211ENST00000556648 TDRD10Q5VZ19 366 aaKnown RBP10.91□□□□□ -0.66
TMEM260-211ENST00000556648 NAA35Q5VZE5 725 aa10.91□□□□□ -0.66
TMEM260-211ENST00000556648 SPOPLQ6IQ16 392 aa10.91□□□□□ -0.66
TMEM260-211ENST00000556648 AADACL2Q6P093 401 aa10.91□□□□□ -0.66
TMEM260-211ENST00000556648 C15orf39Q6ZRI6 1047 aa10.91□□□□□ -0.66
TMEM260-211ENST00000556648 ERO1BQ86YB8 467 aa10.91□□□□□ -0.66
TMEM260-211ENST00000556648 FBXO16Q8IX29 292 aaPredicted RBP10.91□□□□□ -0.66
TMEM260-211ENST00000556648 SYCE1Q8N0S2 351 aa10.91□□□□□ -0.66
TMEM260-211ENST00000556648 RASGEF1CQ8N431 466 aa10.91□□□□□ -0.66
TMEM260-211ENST00000556648 RUBCNQ92622 972 aa10.91□□□□□ -0.66
TMEM260-211ENST00000556648 ALG3Q92685 438 aa10.91□□□□□ -0.66
TMEM260-211ENST00000556648 COPS5Q92905 334 aa10.91□□□□□ -0.66
TMEM260-211ENST00000556648 OPTNQ96CV9 577 aa10.91□□□□□ -0.66
TMEM260-211ENST00000556648 ZBTB10Q96DT7 871 aa10.91□□□□□ -0.66
TMEM260-211ENST00000556648 BTBD6Q96KE9 485 aa10.91□□□□□ -0.66
TMEM260-211ENST00000556648 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.91□□□□□ -0.66
TMEM260-211ENST00000556648 MAF1Q9H063 256 aa10.91□□□□□ -0.66
TMEM260-211ENST00000556648 VIPAS39Q9H9C1 493 aa10.91□□□□□ -0.66
TMEM260-211ENST00000556648 SPON1Q9HCB6 807 aa10.91□□□□□ -0.66
TMEM260-211ENST00000556648 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.91□□□□□ -0.66
TMEM260-211ENST00000556648 RBPJLQ9UBG7 517 aa10.91□□□□□ -0.66
TMEM260-211ENST00000556648 NFU1Q9UMS0 254 aa10.91□□□□□ -0.66
TMEM260-211ENST00000556648 AGTPBP1Q9UPW5 1226 aa10.91□□□□□ -0.66
TMEM260-211ENST00000556648 NR2E1Q9Y466 385 aa10.91□□□□□ -0.66
TMEM260-211ENST00000556648 ZNF233A6NK53 670 aa10.91□□□□□ -0.66
TMEM260-211ENST00000556648 VNN1O95497 513 aa10.91□□□□□ -0.66
TMEM260-211ENST00000556648 GGCXP38435 758 aa10.91□□□□□ -0.66
TMEM260-211ENST00000556648 STAT5BP51692 787 aa10.91□□□□□ -0.66
TMEM260-211ENST00000556648 ERVK-9P63128 1117 aa10.91□□□□□ -0.66
TMEM260-211ENST00000556648 STRN3Q13033 797 aa10.91□□□□□ -0.66
TMEM260-211ENST00000556648 PSMD6Q15008 389 aa10.91□□□□□ -0.66
TMEM260-211ENST00000556648 GLE1Q53GS7 698 aaKnown RBP10.91□□□□□ -0.66
TMEM260-211ENST00000556648 FMNL3Q8IVF7 1028 aa10.91□□□□□ -0.66
TMEM260-211ENST00000556648 ANKRD13AQ8IZ07 590 aa10.91□□□□□ -0.66
TMEM260-211ENST00000556648 LMBR1Q8WVP7 490 aa10.91□□□□□ -0.66
TMEM260-211ENST00000556648 IFT81Q8WYA0 676 aa10.91□□□□□ -0.66
TMEM260-211ENST00000556648 DDX1Q92499 740 aaKnown RBP10.91□□□□□ -0.66
TMEM260-211ENST00000556648 KRT35Q92764 455 aa10.91□□□□□ -0.66
TMEM260-211ENST00000556648 ZMYND15Q9H091 742 aa10.91□□□□□ -0.66
TMEM260-211ENST00000556648 DDX47Q9H0S4 455 aaKnown RBP10.91□□□□□ -0.66
TMEM260-211ENST00000556648 CTTNBP2NLQ9P2B4 639 aa10.91□□□□□ -0.66
TMEM260-211ENST00000556648 PRDM4Q9UKN5 801 aa10.91□□□□□ -0.66
TMEM260-211ENST00000556648 AGO2Q9UKV8 859 aaKnown RBP10.91□□□□□ -0.66
TMEM260-211ENST00000556648 ERICH4A6NGS2 130 aa10.9□□□□□ -0.66
TMEM260-211ENST00000556648 RTN2O75298 545 aa10.9□□□□□ -0.66
TMEM260-211ENST00000556648 HLA-DRAP01903 254 aa10.9□□□□□ -0.66
TMEM260-211ENST00000556648 KRT5P13647 590 aa10.9□□□□□ -0.66
TMEM260-211ENST00000556648 GTF2H1P32780 548 aa10.9□□□□□ -0.66
TMEM260-211ENST00000556648 COPB2P35606 906 aa10.9□□□□□ -0.66
TMEM260-211ENST00000556648 GUCY2FP51841 1108 aa10.9□□□□□ -0.66
TMEM260-211ENST00000556648 EPHB4P54760 987 aa10.9□□□□□ -0.66
TMEM260-211ENST00000556648 TNNC1P63316 161 aa10.9□□□□□ -0.66
TMEM260-211ENST00000556648 HSDL1Q3SXM5 330 aa10.9□□□□□ -0.66
TMEM260-211ENST00000556648 WDR78Q5VTH9 848 aa10.9□□□□□ -0.66
TMEM260-211ENST00000556648 GPAT2Q6NUI2 795 aa10.9□□□□□ -0.66
TMEM260-211ENST00000556648 ADAT2Q7Z6V5 191 aaKnown RBP10.9□□□□□ -0.66
TMEM260-211ENST00000556648 FAM71BQ8TC56 605 aa10.9□□□□□ -0.66
TMEM260-211ENST00000556648 SLC7A3Q8WY07 619 aa10.9□□□□□ -0.66
TMEM260-211ENST00000556648 VTI1AQ96AJ9 217 aa10.9□□□□□ -0.66
TMEM260-211ENST00000556648 ZNF668Q96K58 619 aaPredicted RBP10.9□□□□□ -0.66
TMEM260-211ENST00000556648 KCNH4Q9UQ05 1017 aa10.9□□□□□ -0.66
TMEM260-211ENST00000556648 STYXL1Q9Y6J8 313 aa10.9□□□□□ -0.66
TMEM260-211ENST00000556648 UMODL1Q5DID0 1318 aa10.89□□□□□ -0.67
TMEM260-211ENST00000556648 ZBTB42B2RXF5 422 aa10.89□□□□□ -0.67
TMEM260-211ENST00000556648 H0YCG3 227 aa10.89□□□□□ -0.67
TMEM260-211ENST00000556648 K7ERI5 159 aa10.89□□□□□ -0.67
TMEM260-211ENST00000556648 KRIT1O00522 736 aa10.89□□□□□ -0.67
TMEM260-211ENST00000556648 CXCL11O14625 94 aa10.89□□□□□ -0.67
TMEM260-211ENST00000556648 GRIN3BO60391 1043 aa10.89□□□□□ -0.67
TMEM260-211ENST00000556648 RNF40O75150 1001 aa10.89□□□□□ -0.67
TMEM260-211ENST00000556648 PIGRP01833 764 aa10.89□□□□□ -0.67
TMEM260-211ENST00000556648 C4BPAP04003 597 aaKnown RBP10.89□□□□□ -0.67
TMEM260-211ENST00000556648 SSTR3P32745 418 aaPredicted RBP10.89□□□□□ -0.67
TMEM260-211ENST00000556648 PIK3CAP42336 1068 aa10.89□□□□□ -0.67
TMEM260-211ENST00000556648 GPS2Q13227 327 aa10.89□□□□□ -0.67
TMEM260-211ENST00000556648 PPIL2Q13356 520 aa10.89□□□□□ -0.67
TMEM260-211ENST00000556648 MKRN4PQ13434 485 aaPredicted RBP10.89□□□□□ -0.67
TMEM260-211ENST00000556648 METTL7BQ6UX53 244 aa10.89□□□□□ -0.67
TMEM260-211ENST00000556648 DDX42Q86XP3 938 aaKnown RBP eCLIP10.89□□□□□ -0.67
TMEM260-211ENST00000556648 IFT20Q8IY31 132 aa10.89□□□□□ -0.67
TMEM260-211ENST00000556648 LRRC71Q8N4P6 559 aa10.89□□□□□ -0.67
TMEM260-211ENST00000556648 OR5B17Q8NGF7 314 aa10.89□□□□□ -0.67
TMEM260-211ENST00000556648 AFAP1L1Q8TED9 768 aa10.89□□□□□ -0.67
TMEM260-211ENST00000556648 TRAPPC12Q8WVT3 735 aa10.89□□□□□ -0.67
TMEM260-211ENST00000556648 CAVIN3Q969G5 261 aa10.89□□□□□ -0.67
TMEM260-211ENST00000556648 MMP19Q99542 508 aa10.89□□□□□ -0.67
TMEM260-211ENST00000556648 GPR20Q99678 358 aa10.89□□□□□ -0.67
TMEM260-211ENST00000556648 APOBEC3GQ9HC16 384 aaKnown RBP10.89□□□□□ -0.67
TMEM260-211ENST00000556648 RBAKQ9NYW8 714 aaPredicted RBP10.89□□□□□ -0.67
TMEM260-211ENST00000556648 ADAM21Q9UKJ8 722 aa10.89□□□□□ -0.67
TMEM260-211ENST00000556648 ADGRA2Q96PE1 1338 aa10.89□□□□□ -0.67
TMEM260-211ENST00000556648 A0A0B4J269 797 aa10.89□□□□□ -0.67
TMEM260-211ENST00000556648 FGGP02679 453 aa10.89□□□□□ -0.67
TMEM260-211ENST00000556648 GJB1P08034 283 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms