RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 ASB16Q96NS5 453 aa11.24□□□□□ -0.61
SCFD1-220ENST00000556486 MYADMQ96S97 322 aa11.24□□□□□ -0.61
SCFD1-220ENST00000556486 MAP7D2Q96T17 732 aa11.24□□□□□ -0.61
SCFD1-220ENST00000556486 MAN1C1Q9NR34 630 aa11.24□□□□□ -0.61
SCFD1-220ENST00000556486 DISC1Q9NRI5 854 aa11.24□□□□□ -0.61
SCFD1-220ENST00000556486 GABBR1Q9UBS5 961 aa11.24□□□□□ -0.61
SCFD1-220ENST00000556486 TCEAL9Q9UHQ7 104 aa11.24□□□□□ -0.61
SCFD1-220ENST00000556486 TPRP12270 2363 aaKnown RBP11.24□□□□□ -0.61
SCFD1-220ENST00000556486 MIA3Q5JRA6 1907 aa11.23□□□□□ -0.61
SCFD1-220ENST00000556486 CACNA1IQ9P0X4 2223 aa11.23□□□□□ -0.61
SCFD1-220ENST00000556486 ACACBO00763 2458 aa11.23□□□□□ -0.61
SCFD1-220ENST00000556486 MAP1BP46821 2468 aaKnown RBP11.23□□□□□ -0.61
SCFD1-220ENST00000556486 CYP3A7-CYP3A51PA0A087WV96 503 aa11.23□□□□□ -0.61
SCFD1-220ENST00000556486 A0A0U1RQF3 1178 aa11.23□□□□□ -0.61
SCFD1-220ENST00000556486 DCDC2BA2VCK2 349 aa11.23□□□□□ -0.61
SCFD1-220ENST00000556486 MSH4O15457 936 aa11.23□□□□□ -0.61
SCFD1-220ENST00000556486 RFPL2O75678 378 aa11.23□□□□□ -0.61
SCFD1-220ENST00000556486 CNPP09543 421 aaKnown RBP11.23□□□□□ -0.61
SCFD1-220ENST00000556486 DARSP14868 501 aaKnown RBP11.23□□□□□ -0.61
SCFD1-220ENST00000556486 CPA1P15085 419 aa11.23□□□□□ -0.61
SCFD1-220ENST00000556486 CYP3A7P24462 503 aa11.23□□□□□ -0.61
SCFD1-220ENST00000556486 PDIA3P30101 505 aaKnown RBP11.23□□□□□ -0.61
SCFD1-220ENST00000556486 SLC11A1P49279 550 aa11.23□□□□□ -0.61
SCFD1-220ENST00000556486 CLCN4P51793 760 aa11.23□□□□□ -0.61
SCFD1-220ENST00000556486 JAK3P52333 1124 aa11.23□□□□□ -0.61
SCFD1-220ENST00000556486 CDC42EP1Q00587 391 aa11.23□□□□□ -0.61
SCFD1-220ENST00000556486 AKAP17AQ02040 695 aaKnown RBP11.23□□□□□ -0.61
SCFD1-220ENST00000556486 RNASELQ05823 741 aaKnown RBP11.23□□□□□ -0.61
SCFD1-220ENST00000556486 USP4Q13107 963 aa11.23□□□□□ -0.61
SCFD1-220ENST00000556486 MOXD1Q6UVY6 613 aa11.23□□□□□ -0.61
SCFD1-220ENST00000556486 DDX53Q86TM3 631 aaKnown RBP11.23□□□□□ -0.61
SCFD1-220ENST00000556486 ZNF280BQ86YH2 543 aa11.23□□□□□ -0.61
SCFD1-220ENST00000556486 SLC44A3Q8N4M1 653 aa11.23□□□□□ -0.61
SCFD1-220ENST00000556486 SUMF1Q8NBK3 374 aa11.23□□□□□ -0.61
SCFD1-220ENST00000556486 PHKBQ93100 1093 aa11.23□□□□□ -0.61
SCFD1-220ENST00000556486 MBOAT7Q96N66 472 aa11.23□□□□□ -0.61
SCFD1-220ENST00000556486 KLHL5Q96PQ7 755 aa11.23□□□□□ -0.61
SCFD1-220ENST00000556486 MRPL9Q9BYD2 267 aaKnown RBP11.23□□□□□ -0.61
SCFD1-220ENST00000556486 C22orf23Q9BZE7 217 aa11.23□□□□□ -0.61
SCFD1-220ENST00000556486 NRDE2Q9H7Z3 1164 aa11.23□□□□□ -0.61
SCFD1-220ENST00000556486 NRBP2Q9NSY0 501 aa11.23□□□□□ -0.61
SCFD1-220ENST00000556486 TBC1D13Q9NVG8 400 aa11.23□□□□□ -0.61
SCFD1-220ENST00000556486 NCDNQ9UBB6 729 aa11.23□□□□□ -0.61
SCFD1-220ENST00000556486 DCTN4Q9UJW0 460 aa11.23□□□□□ -0.61
SCFD1-220ENST00000556486 IGKV6-21A0A0C4DH24 114 aa11.22□□□□□ -0.61
SCFD1-220ENST00000556486 CCDC195A0A1B0GUA6 201 aa11.22□□□□□ -0.61
SCFD1-220ENST00000556486 M0R2N6 131 aa11.22□□□□□ -0.61
SCFD1-220ENST00000556486 PSMD10O75832 226 aa11.22□□□□□ -0.61
SCFD1-220ENST00000556486 REC8O95072 547 aa11.22□□□□□ -0.61
SCFD1-220ENST00000556486 GALTP07902 379 aa11.22□□□□□ -0.61
SCFD1-220ENST00000556486 PSMA5P28066 241 aa11.22□□□□□ -0.61
SCFD1-220ENST00000556486 GPC3P51654 580 aa11.22□□□□□ -0.61
SCFD1-220ENST00000556486 AFF1P51825 1210 aaKnown RBP11.22□□□□□ -0.61
SCFD1-220ENST00000556486 COPS2P61201 443 aa11.22□□□□□ -0.61
SCFD1-220ENST00000556486 PRKCEQ02156 737 aa11.22□□□□□ -0.61
SCFD1-220ENST00000556486 TBC1D8BQ0IIM8 1120 aa11.22□□□□□ -0.61
SCFD1-220ENST00000556486 DRP2Q13474 957 aa11.22□□□□□ -0.61
SCFD1-220ENST00000556486 ECM1Q16610 540 aa11.22□□□□□ -0.61
SCFD1-220ENST00000556486 Q4G0T1 1027 aa11.22□□□□□ -0.61
SCFD1-220ENST00000556486 ZC3H14Q6PJT7 736 aaKnown RBP11.22□□□□□ -0.61
SCFD1-220ENST00000556486 GPR179Q6PRD1 2367 aa11.22□□□□□ -0.61
SCFD1-220ENST00000556486 GET4Q7L5D6 327 aaPredicted RBP11.22□□□□□ -0.61
SCFD1-220ENST00000556486 C1orf210Q8IVY1 113 aa11.22□□□□□ -0.61
SCFD1-220ENST00000556486 DOCK8Q8NF50 2099 aa11.22□□□□□ -0.61
SCFD1-220ENST00000556486 CCDC136Q96JN2 1154 aa11.22□□□□□ -0.61
SCFD1-220ENST00000556486 CEP89Q96ST8 783 aa11.22□□□□□ -0.61
SCFD1-220ENST00000556486 SH2D3AQ9BRG2 576 aa11.22□□□□□ -0.61
SCFD1-220ENST00000556486 NIFKQ9BYG3 293 aaKnown RBP11.22□□□□□ -0.61
SCFD1-220ENST00000556486 SEMA4AQ9H3S1 761 aa11.22□□□□□ -0.61
SCFD1-220ENST00000556486 ARHGEF3Q9NR81 526 aa11.22□□□□□ -0.61
SCFD1-220ENST00000556486 DLGAP2Q9P1A6 1054 aa11.22□□□□□ -0.61
SCFD1-220ENST00000556486 IGSF9Q9P2J2 1179 aa11.22□□□□□ -0.61
SCFD1-220ENST00000556486 WNT16Q9UBV4 365 aa11.22□□□□□ -0.61
SCFD1-220ENST00000556486 SEPT3Q9UH03 358 aa11.22□□□□□ -0.61
SCFD1-220ENST00000556486 MYH15Q9Y2K3 1946 aa11.22□□□□□ -0.61
SCFD1-220ENST00000556486 SIT1Q9Y3P8 196 aa11.22□□□□□ -0.61
SCFD1-220ENST00000556486 SAMM50Q9Y512 469 aa11.22□□□□□ -0.61
SCFD1-220ENST00000556486 DNMT3AQ9Y6K1 912 aaPredicted RBP11.22□□□□□ -0.61
SCFD1-220ENST00000556486 CACNA1GO43497 2377 aa11.21□□□□□ -0.61
SCFD1-220ENST00000556486 PATJQ8NI35 1801 aa11.21□□□□□ -0.61
SCFD1-220ENST00000556486 CLUHO75153 1309 aa11.21□□□□□ -0.61
SCFD1-220ENST00000556486 TMEM150BA6NC51 233 aa11.21□□□□□ -0.61
SCFD1-220ENST00000556486 GAS7O60861 476 aa11.21□□□□□ -0.61
SCFD1-220ENST00000556486 STBD1O95210 358 aa11.21□□□□□ -0.61
SCFD1-220ENST00000556486 PHKA2P46019 1235 aa11.21□□□□□ -0.61
SCFD1-220ENST00000556486 ATXN1P54253 815 aaKnown RBP11.21□□□□□ -0.61
SCFD1-220ENST00000556486 AK2P54819 239 aa11.21□□□□□ -0.61
SCFD1-220ENST00000556486 TAGLNQ01995 201 aaKnown RBP11.21□□□□□ -0.61
SCFD1-220ENST00000556486 NPY5RQ15761 445 aa11.21□□□□□ -0.61
SCFD1-220ENST00000556486 UGCGQ16739 394 aa11.21□□□□□ -0.61
SCFD1-220ENST00000556486 ST3GAL2Q16842 350 aa11.21□□□□□ -0.61
SCFD1-220ENST00000556486 LRCH2Q5VUJ6 765 aa11.21□□□□□ -0.61
SCFD1-220ENST00000556486 TWF2Q6IBS0 349 aaKnown RBP11.21□□□□□ -0.61
SCFD1-220ENST00000556486 GALNT17Q6IS24 598 aa11.21□□□□□ -0.61
SCFD1-220ENST00000556486 TAS1R1Q7RTX1 841 aa11.21□□□□□ -0.61
SCFD1-220ENST00000556486 BPHLQ86WA6 291 aaPredicted RBP11.21□□□□□ -0.61
SCFD1-220ENST00000556486 MAML2Q8IZL2 1156 aaPredicted RBP11.21□□□□□ -0.61
SCFD1-220ENST00000556486 DAGLBQ8NCG7 672 aa11.21□□□□□ -0.61
SCFD1-220ENST00000556486 B3GALT6Q96L58 329 aa11.21□□□□□ -0.61
SCFD1-220ENST00000556486 MKNK1Q9BUB5 465 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms