RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 GRIK3Q13003 919 aa15.51■□□□□ 0.07
ACTN1-219ENST00000556432 PSMD5Q16401 504 aa15.51■□□□□ 0.07
ACTN1-219ENST00000556432 ZNF852Q6ZMS4 543 aa15.51■□□□□ 0.07
ACTN1-219ENST00000556432 PRR23BQ6ZRT6 265 aa15.51■□□□□ 0.07
ACTN1-219ENST00000556432 FERMT3Q86UX7 667 aa15.51■□□□□ 0.07
ACTN1-219ENST00000556432 RASEFQ8IZ41 740 aa15.51■□□□□ 0.07
ACTN1-219ENST00000556432 SLC7A14Q8TBB6 771 aa15.51■□□□□ 0.07
ACTN1-219ENST00000556432 ETNPPLQ8TBG4 499 aa15.51■□□□□ 0.07
ACTN1-219ENST00000556432 BRF1Q92994 677 aa15.51■□□□□ 0.07
ACTN1-219ENST00000556432 MBOAT7Q96N66 472 aa15.51■□□□□ 0.07
ACTN1-219ENST00000556432 TTPALQ9BTX7 342 aa15.51■□□□□ 0.07
ACTN1-219ENST00000556432 DHX33Q9H6R0 707 aaKnown RBP15.51■□□□□ 0.07
ACTN1-219ENST00000556432 PARD6AQ9NPB6 346 aa15.51■□□□□ 0.07
ACTN1-219ENST00000556432 KLK14Q9P0G3 267 aa15.51■□□□□ 0.07
ACTN1-219ENST00000556432 CACNG4Q9UBN1 327 aa15.51■□□□□ 0.07
ACTN1-219ENST00000556432 PARP2Q9UGN5 583 aa15.51■□□□□ 0.07
ACTN1-219ENST00000556432 DDX25Q9UHL0 483 aaKnown RBP15.51■□□□□ 0.07
ACTN1-219ENST00000556432 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.51■□□□□ 0.07
ACTN1-219ENST00000556432 USP24Q9UPU5 2620 aa15.51■□□□□ 0.07
ACTN1-219ENST00000556432 EML1O00423 815 aa15.5■□□□□ 0.07
ACTN1-219ENST00000556432 ASAP2O43150 1006 aa15.5■□□□□ 0.07
ACTN1-219ENST00000556432 CPA1P15085 419 aa15.5■□□□□ 0.07
ACTN1-219ENST00000556432 RPS9P46781 194 aaKnown RBP15.5■□□□□ 0.07
ACTN1-219ENST00000556432 MTAPQ13126 283 aa15.5■□□□□ 0.07
ACTN1-219ENST00000556432 HSP90AA2PQ14568 343 aaPredicted RBP15.5■□□□□ 0.07
ACTN1-219ENST00000556432 PCBP1Q15365 356 aaKnown RBP eCLIP15.5■□□□□ 0.07
ACTN1-219ENST00000556432 PABPC1LQ4VXU2 614 aaKnown RBP15.5■□□□□ 0.07
ACTN1-219ENST00000556432 XKR9Q5GH70 373 aa15.5■□□□□ 0.07
ACTN1-219ENST00000556432 FAM171A1Q5VUB5 890 aa15.5■□□□□ 0.07
ACTN1-219ENST00000556432 B3GNT9Q6UX72 402 aa15.5■□□□□ 0.07
ACTN1-219ENST00000556432 Q6ZUG5 572 aa15.5■□□□□ 0.07
ACTN1-219ENST00000556432 NPAS3Q8IXF0 933 aa15.5■□□□□ 0.07
ACTN1-219ENST00000556432 NETO1Q8TDF5 533 aa15.5■□□□□ 0.07
ACTN1-219ENST00000556432 CLDN23Q96B33 292 aa15.5■□□□□ 0.07
ACTN1-219ENST00000556432 RNF26Q9BY78 433 aaPredicted RBP15.5■□□□□ 0.07
ACTN1-219ENST00000556432 FAM126AQ9BYI3 521 aaPredicted RBP15.5■□□□□ 0.07
ACTN1-219ENST00000556432 PRMT8Q9NR22 394 aaPredicted RBP15.5■□□□□ 0.07
ACTN1-219ENST00000556432 HEBP1Q9NRV9 189 aa15.5■□□□□ 0.07
ACTN1-219ENST00000556432 HCFC1R1Q9NWW0 138 aa15.5■□□□□ 0.07
ACTN1-219ENST00000556432 NDRG2Q9UN36 371 aaKnown RBP15.5■□□□□ 0.07
ACTN1-219ENST00000556432 PPME1Q9Y570 386 aa15.5■□□□□ 0.07
ACTN1-219ENST00000556432 CFAP47Q6ZTR5 3102 aa15.5■□□□□ 0.07
ACTN1-219ENST00000556432 CYP3A7-CYP3A51PA0A087WV96 503 aa15.49■□□□□ 0.07
ACTN1-219ENST00000556432 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.49■□□□□ 0.07
ACTN1-219ENST00000556432 CASTOR2A6NHX0 329 aa15.49■□□□□ 0.07
ACTN1-219ENST00000556432 NPTXRO95502 500 aa15.49■□□□□ 0.07
ACTN1-219ENST00000556432 P4HBP07237 508 aaKnown RBP15.49■□□□□ 0.07
ACTN1-219ENST00000556432 TGM1P22735 817 aa15.49■□□□□ 0.07
ACTN1-219ENST00000556432 CYP3A7P24462 503 aa15.49■□□□□ 0.07
ACTN1-219ENST00000556432 YWHABP31946 246 aaKnown RBP15.49■□□□□ 0.07
ACTN1-219ENST00000556432 NRLP54845 237 aa15.49■□□□□ 0.07
ACTN1-219ENST00000556432 ADCY1Q08828 1119 aa15.49■□□□□ 0.07
ACTN1-219ENST00000556432 TFDP1Q14186 410 aa15.49■□□□□ 0.07
ACTN1-219ENST00000556432 PPP2R5DQ14738 602 aa15.49■□□□□ 0.07
ACTN1-219ENST00000556432 LAIR1Q6GTX8 287 aa15.49■□□□□ 0.07
ACTN1-219ENST00000556432 OTUD6AQ7L8S5 288 aa15.49■□□□□ 0.07
ACTN1-219ENST00000556432 MTRQ99707 1265 aa15.49■□□□□ 0.07
ACTN1-219ENST00000556432 CLSTN3Q9BQT9 956 aa15.49■□□□□ 0.07
ACTN1-219ENST00000556432 LXNQ9BS40 222 aa15.49■□□□□ 0.07
ACTN1-219ENST00000556432 SH3GLB2Q9NR46 395 aa15.49■□□□□ 0.07
ACTN1-219ENST00000556432 PCDHA4Q9UN74 947 aa15.49■□□□□ 0.07
ACTN1-219ENST00000556432 MRPS23Q9Y3D9 190 aaKnown RBP15.49■□□□□ 0.07
ACTN1-219ENST00000556432 MARCH6O60337 910 aa15.48■□□□□ 0.07
ACTN1-219ENST00000556432 HOXA9P31269 272 aa15.48■□□□□ 0.07
ACTN1-219ENST00000556432 PTENP60484 403 aa15.48■□□□□ 0.07
ACTN1-219ENST00000556432 MXD4Q14582 209 aaPredicted RBP15.48■□□□□ 0.07
ACTN1-219ENST00000556432 AXDND1Q5T1B0 1012 aaPredicted RBP15.48■□□□□ 0.07
ACTN1-219ENST00000556432 CDR2LQ86X02 465 aaPredicted RBP15.48■□□□□ 0.07
ACTN1-219ENST00000556432 PIK3R5Q8WYR1 880 aa15.48■□□□□ 0.07
ACTN1-219ENST00000556432 NELL1Q92832 810 aa15.48■□□□□ 0.07
ACTN1-219ENST00000556432 MCRS1Q96EZ8 462 aa15.48■□□□□ 0.07
ACTN1-219ENST00000556432 PAAF1Q9BRP4 392 aa15.48■□□□□ 0.07
ACTN1-219ENST00000556432 WRAP73Q9P2S5 460 aaPredicted RBP15.48■□□□□ 0.07
ACTN1-219ENST00000556432 SLC30A4O14863 429 aa15.47■□□□□ 0.07
ACTN1-219ENST00000556432 SLC37A4O43826 429 aa15.47■□□□□ 0.07
ACTN1-219ENST00000556432 KIF4AO95239 1232 aa15.47■□□□□ 0.07
ACTN1-219ENST00000556432 ARF4P18085 180 aaPredicted RBP15.47■□□□□ 0.07
ACTN1-219ENST00000556432 DMWDQ09019 674 aa15.47■□□□□ 0.07
ACTN1-219ENST00000556432 PPP2R5CQ13362 524 aa15.47■□□□□ 0.07
ACTN1-219ENST00000556432 TUSC3Q13454 348 aa15.47■□□□□ 0.07
ACTN1-219ENST00000556432 INF2Q27J81 1249 aa15.47■□□□□ 0.07
ACTN1-219ENST00000556432 TSGA10IPQ3SY00 556 aa15.47■□□□□ 0.07
ACTN1-219ENST00000556432 MOXD1Q6UVY6 613 aa15.47■□□□□ 0.07
ACTN1-219ENST00000556432 TRIM22Q8IYM9 498 aa15.47■□□□□ 0.07
ACTN1-219ENST00000556432 BLIDQ8IZY5 108 aa15.47■□□□□ 0.07
ACTN1-219ENST00000556432 GSTCDQ8NEC7 633 aa15.47■□□□□ 0.07
ACTN1-219ENST00000556432 JAKMIP1Q96N16 626 aaKnown RBP15.47■□□□□ 0.07
ACTN1-219ENST00000556432 NCOA5Q9HCD5 579 aaKnown RBP15.47■□□□□ 0.07
ACTN1-219ENST00000556432 DNMT3BQ9UBC3 853 aaKnown RBP15.47■□□□□ 0.07
ACTN1-219ENST00000556432 VAV3Q9UKW4 847 aa15.47■□□□□ 0.07
ACTN1-219ENST00000556432 KCNH3Q9ULD8 1083 aa15.47■□□□□ 0.07
ACTN1-219ENST00000556432 ZFHX4Q86UP3 3567 aa15.46■□□□□ 0.07
ACTN1-219ENST00000556432 ADAM12O43184 909 aa15.46■□□□□ 0.07
ACTN1-219ENST00000556432 B4GALT5O43286 388 aa15.46■□□□□ 0.07
ACTN1-219ENST00000556432 ECI2O75521 394 aa15.46■□□□□ 0.07
ACTN1-219ENST00000556432 RETP07949 1114 aa15.46■□□□□ 0.07
ACTN1-219ENST00000556432 CCT2P78371 535 aaKnown RBP15.46■□□□□ 0.07
ACTN1-219ENST00000556432 CYP4A11Q02928 519 aa15.46■□□□□ 0.07
ACTN1-219ENST00000556432 MBTD1Q05BQ5 628 aa15.46■□□□□ 0.07
ACTN1-219ENST00000556432 ELAVL2Q12926 359 aaKnown RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms