RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 MAPK6Q16659 721 aa20.8■□□□□ 0.92
CDKN3-209ENST00000556102 PALB2Q86YC2 1186 aa20.8■□□□□ 0.92
CDKN3-209ENST00000556102 RIN2Q8WYP3 895 aaPredicted RBP20.8■□□□□ 0.92
CDKN3-209ENST00000556102 SMG7Q92540 1137 aaKnown RBP20.8■□□□□ 0.92
CDKN3-209ENST00000556102 RABGGTAQ92696 567 aa20.8■□□□□ 0.92
CDKN3-209ENST00000556102 PDZD7Q9H5P4 517 aa20.8■□□□□ 0.92
CDKN3-209ENST00000556102 SF3B1O75533 1304 aaKnown RBP eCLIP20.79■□□□□ 0.92
CDKN3-209ENST00000556102 USP34Q70CQ2 3546 aa20.79■□□□□ 0.92
CDKN3-209ENST00000556102 TTLL13PA6NNM8 815 aa20.79■□□□□ 0.92
CDKN3-209ENST00000556102 H0Y858 1186 aa20.79■□□□□ 0.92
CDKN3-209ENST00000556102 TGM5O43548 720 aa20.79■□□□□ 0.92
CDKN3-209ENST00000556102 N4BP1O75113 896 aaKnown RBP20.79■□□□□ 0.92
CDKN3-209ENST00000556102 PRKCBP05771 671 aa20.79■□□□□ 0.92
CDKN3-209ENST00000556102 SPATA31D3P0C874 917 aa20.79■□□□□ 0.92
CDKN3-209ENST00000556102 GBP2P32456 591 aaPredicted RBP20.79■□□□□ 0.92
CDKN3-209ENST00000556102 NAMPTP43490 491 aa20.79■□□□□ 0.92
CDKN3-209ENST00000556102 PRPF4BQ13523 1007 aaKnown RBP20.79■□□□□ 0.92
CDKN3-209ENST00000556102 TMEM132AQ24JP5 1023 aa20.79■□□□□ 0.92
CDKN3-209ENST00000556102 TTC38Q5R3I4 469 aa20.79■□□□□ 0.92
CDKN3-209ENST00000556102 HAUS3Q68CZ6 603 aa20.79■□□□□ 0.92
CDKN3-209ENST00000556102 SPATA31D4Q6ZUB0 917 aa20.79■□□□□ 0.92
CDKN3-209ENST00000556102 ZNF707Q96C28 371 aaPredicted RBP20.79■□□□□ 0.92
CDKN3-209ENST00000556102 PAAF1Q9BRP4 392 aa20.79■□□□□ 0.92
CDKN3-209ENST00000556102 ADPGKQ9BRR6 497 aa20.79■□□□□ 0.92
CDKN3-209ENST00000556102 CCDC113Q9H0I3 377 aa20.79■□□□□ 0.92
CDKN3-209ENST00000556102 ZDHHC7Q9NXF8 308 aa20.79■□□□□ 0.92
CDKN3-209ENST00000556102 SNTG2Q9NY99 539 aa20.79■□□□□ 0.92
CDKN3-209ENST00000556102 ACKR2O00590 384 aa20.78■□□□□ 0.92
CDKN3-209ENST00000556102 PTGESO14684 152 aa20.78■□□□□ 0.92
CDKN3-209ENST00000556102 HMGN5P82970 282 aaKnown RBP20.78■□□□□ 0.92
CDKN3-209ENST00000556102 PPP2R5AQ15172 486 aa20.78■□□□□ 0.92
CDKN3-209ENST00000556102 LILRA6Q6PI73 481 aa20.78■□□□□ 0.92
CDKN3-209ENST00000556102 GLYCTKQ8IVS8 523 aa20.78■□□□□ 0.92
CDKN3-209ENST00000556102 FBXO18Q8NFZ0 1043 aa20.78■□□□□ 0.92
CDKN3-209ENST00000556102 DEPTORQ8TB45 409 aa20.78■□□□□ 0.92
CDKN3-209ENST00000556102 NT5C3AQ9H0P0 336 aa20.78■□□□□ 0.92
CDKN3-209ENST00000556102 CACNG4Q9UBN1 327 aa20.78■□□□□ 0.92
CDKN3-209ENST00000556102 CASTOR2A6NHX0 329 aa20.77■□□□□ 0.92
CDKN3-209ENST00000556102 RECQL4O94761 1208 aa20.77■□□□□ 0.92
CDKN3-209ENST00000556102 THP07101 528 aa20.77■□□□□ 0.92
CDKN3-209ENST00000556102 RPL17P18621 184 aaKnown RBP20.77■□□□□ 0.92
CDKN3-209ENST00000556102 TRAPPC10P48553 1259 aa20.77■□□□□ 0.92
CDKN3-209ENST00000556102 RBM25P49756 843 aaKnown RBP20.77■□□□□ 0.92
CDKN3-209ENST00000556102 RTP2Q5QGT7 225 aa20.77■□□□□ 0.92
CDKN3-209ENST00000556102 CWF19L1Q69YN2 538 aaKnown RBP20.77■□□□□ 0.92
CDKN3-209ENST00000556102 FLCNQ8NFG4 579 aa20.77■□□□□ 0.92
CDKN3-209ENST00000556102 PRKD2Q9BZL6 878 aa20.77■□□□□ 0.92
CDKN3-209ENST00000556102 PIDD1Q9HB75 910 aa20.77■□□□□ 0.92
CDKN3-209ENST00000556102 EPS15L1Q9UBC2 864 aa20.77■□□□□ 0.92
CDKN3-209ENST00000556102 DAXXQ9UER7 740 aaPredicted RBP20.77■□□□□ 0.92
CDKN3-209ENST00000556102 TRIP11Q15643 1979 aa20.77■□□□□ 0.92
CDKN3-209ENST00000556102 ZFHX2Q9C0A1 2572 aaPredicted RBP20.77■□□□□ 0.91
CDKN3-209ENST00000556102 DOCK6Q96HP0 2047 aa20.77■□□□□ 0.91
CDKN3-209ENST00000556102 ST18O60284 1047 aa20.76■□□□□ 0.91
CDKN3-209ENST00000556102 GFRA3O60609 400 aa20.76■□□□□ 0.91
CDKN3-209ENST00000556102 KIF4AO95239 1232 aa20.76■□□□□ 0.91
CDKN3-209ENST00000556102 EDN1P05305 212 aa20.76■□□□□ 0.91
CDKN3-209ENST00000556102 LIG1P18858 919 aa20.76■□□□□ 0.91
CDKN3-209ENST00000556102 CCT6AP40227 531 aaKnown RBP20.76■□□□□ 0.91
CDKN3-209ENST00000556102 FXR2P51116 673 aaKnown RBP eCLIP20.76■□□□□ 0.91
CDKN3-209ENST00000556102 GNL2Q13823 731 aaKnown RBP20.76■□□□□ 0.91
CDKN3-209ENST00000556102 DCAF4L1Q3SXM0 396 aa20.76■□□□□ 0.91
CDKN3-209ENST00000556102 PRSS55Q6UWB4 352 aaPredicted RBP20.76■□□□□ 0.91
CDKN3-209ENST00000556102 NOSTRINQ8IVI9 506 aa20.76■□□□□ 0.91
CDKN3-209ENST00000556102 HASPINQ8TF76 798 aa20.76■□□□□ 0.91
CDKN3-209ENST00000556102 PIK3R5Q8WYR1 880 aa20.76■□□□□ 0.91
CDKN3-209ENST00000556102 IFT74Q96LB3 600 aa20.76■□□□□ 0.91
CDKN3-209ENST00000556102 ZSCAN31Q96LW9 406 aaPredicted RBP20.76■□□□□ 0.91
CDKN3-209ENST00000556102 MYADMQ96S97 322 aa20.76■□□□□ 0.91
CDKN3-209ENST00000556102 TTPALQ9BTX7 342 aa20.76■□□□□ 0.91
CDKN3-209ENST00000556102 FBXL21Q9UKT6 434 aa20.76■□□□□ 0.91
CDKN3-209ENST00000556102 NOL7Q9UMY1 257 aaKnown RBP20.76■□□□□ 0.91
CDKN3-209ENST00000556102 VWA8A3KMH1 1905 aa20.76■□□□□ 0.91
CDKN3-209ENST00000556102 ZMYND10O75800 440 aa20.75■□□□□ 0.91
CDKN3-209ENST00000556102 EFNA5P52803 228 aa20.75■□□□□ 0.91
CDKN3-209ENST00000556102 ELAVL2Q12926 359 aaKnown RBP20.75■□□□□ 0.91
CDKN3-209ENST00000556102 NAB2Q15742 525 aa20.75■□□□□ 0.91
CDKN3-209ENST00000556102 ECM1Q16610 540 aa20.75■□□□□ 0.91
CDKN3-209ENST00000556102 FAM171A1Q5VUB5 890 aa20.75■□□□□ 0.91
CDKN3-209ENST00000556102 EEF1DP3Q658K8 133 aa20.75■□□□□ 0.91
CDKN3-209ENST00000556102 C4orf32Q8N8J7 132 aa20.75■□□□□ 0.91
CDKN3-209ENST00000556102 FAM184AQ8NB25 1140 aa20.75■□□□□ 0.91
CDKN3-209ENST00000556102 RSAD2Q8WXG1 361 aa20.75■□□□□ 0.91
CDKN3-209ENST00000556102 KIFAP3Q92845 792 aa20.75■□□□□ 0.91
CDKN3-209ENST00000556102 NXPE3Q969Y0 559 aa20.75■□□□□ 0.91
CDKN3-209ENST00000556102 CXCL16Q9H2A7 254 aa20.75■□□□□ 0.91
CDKN3-209ENST00000556102 BHMT2Q9H2M3 363 aa20.75■□□□□ 0.91
CDKN3-209ENST00000556102 USP20Q9Y2K6 914 aa20.75■□□□□ 0.91
CDKN3-209ENST00000556102 PROB1E7EW31 1015 aa20.74■□□□□ 0.91
CDKN3-209ENST00000556102 NARSO43776 548 aaKnown RBP20.74■□□□□ 0.91
CDKN3-209ENST00000556102 NPR3P17342 541 aa20.74■□□□□ 0.91
CDKN3-209ENST00000556102 AOC1P19801 751 aa20.74■□□□□ 0.91
CDKN3-209ENST00000556102 PSMD5Q16401 504 aa20.74■□□□□ 0.91
CDKN3-209ENST00000556102 SIX5Q8N196 739 aa20.74■□□□□ 0.91
CDKN3-209ENST00000556102 KIFC3Q9BVG8 833 aa20.74■□□□□ 0.91
CDKN3-209ENST00000556102 SH2B1Q9NRF2 756 aaPredicted RBP20.74■□□□□ 0.91
CDKN3-209ENST00000556102 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.74■□□□□ 0.91
CDKN3-209ENST00000556102 LRWD1Q9UFC0 647 aa20.74■□□□□ 0.91
CDKN3-209ENST00000556102 FBXW11Q9UKB1 542 aa20.74■□□□□ 0.91
CDKN3-209ENST00000556102 NBR1Q14596 966 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms