RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 AGMOQ6ZNB7 445 aa7.44□□□□□ -1.22
PSEN1-216ENST00000556066 MAEAQ7L5Y9 396 aa7.44□□□□□ -1.22
PSEN1-216ENST00000556066 ZBTB33Q86T24 672 aa7.44□□□□□ -1.22
PSEN1-216ENST00000556066 ZNF280BQ86YH2 543 aa7.44□□□□□ -1.22
PSEN1-216ENST00000556066 CCDC83Q8IWF9 413 aa7.44□□□□□ -1.22
PSEN1-216ENST00000556066 PRR7Q8TB68 274 aa7.44□□□□□ -1.22
PSEN1-216ENST00000556066 BCL7CQ8WUZ0 217 aaPredicted RBP7.44□□□□□ -1.22
PSEN1-216ENST00000556066 SUSD6Q92537 303 aa7.44□□□□□ -1.22
PSEN1-216ENST00000556066 EDAQ92838 391 aa7.44□□□□□ -1.22
PSEN1-216ENST00000556066 CASP10Q92851 521 aa7.44□□□□□ -1.22
PSEN1-216ENST00000556066 IGSF21Q96ID5 467 aa7.44□□□□□ -1.22
PSEN1-216ENST00000556066 CPB2Q96IY4 423 aa7.44□□□□□ -1.22
PSEN1-216ENST00000556066 FAM193BQ96PV7 902 aaPredicted RBP7.44□□□□□ -1.22
PSEN1-216ENST00000556066 USB1Q9BQ65 265 aaKnown RBP7.44□□□□□ -1.22
PSEN1-216ENST00000556066 APOL6Q9BWW8 343 aa7.44□□□□□ -1.22
PSEN1-216ENST00000556066 S1PR5Q9H228 398 aa7.44□□□□□ -1.22
PSEN1-216ENST00000556066 KCNH6Q9H252 994 aa7.44□□□□□ -1.22
PSEN1-216ENST00000556066 RSAD1Q9HA92 442 aa7.44□□□□□ -1.22
PSEN1-216ENST00000556066 EP300Q09472 2414 aaPredicted RBP7.44□□□□□ -1.22
PSEN1-216ENST00000556066 C2orf16Q68DN1 1984 aa7.44□□□□□ -1.22
PSEN1-216ENST00000556066 PLXNA3P51805 1871 aa7.43□□□□□ -1.22
PSEN1-216ENST00000556066 TRIP11Q15643 1979 aa7.43□□□□□ -1.22
PSEN1-216ENST00000556066 CARNS1A5YM72 827 aa7.43□□□□□ -1.22
PSEN1-216ENST00000556066 C2CD2LO14523 706 aa7.43□□□□□ -1.22
PSEN1-216ENST00000556066 ST8SIA5O15466 376 aa7.43□□□□□ -1.22
PSEN1-216ENST00000556066 B4GALT3O60512 393 aa7.43□□□□□ -1.22
PSEN1-216ENST00000556066 TSPAN1O60635 241 aa7.43□□□□□ -1.22
PSEN1-216ENST00000556066 USO1O60763 962 aaKnown RBP7.43□□□□□ -1.22
PSEN1-216ENST00000556066 DDHD2O94830 711 aa7.43□□□□□ -1.22
PSEN1-216ENST00000556066 ALDH2P05091 517 aa7.43□□□□□ -1.22
PSEN1-216ENST00000556066 ITGA4P13612 1032 aa7.43□□□□□ -1.22
PSEN1-216ENST00000556066 SLC11A1P49279 550 aa7.43□□□□□ -1.22
PSEN1-216ENST00000556066 AFF1P51825 1210 aaKnown RBP7.43□□□□□ -1.22
PSEN1-216ENST00000556066 PTENP60484 403 aa7.43□□□□□ -1.22
PSEN1-216ENST00000556066 ST3GAL1Q11201 340 aa7.43□□□□□ -1.22
PSEN1-216ENST00000556066 C8orf34Q49A92 452 aa7.43□□□□□ -1.22
PSEN1-216ENST00000556066 UBXN11Q5T124 520 aa7.43□□□□□ -1.22
PSEN1-216ENST00000556066 RARS2Q5T160 578 aaKnown RBP7.43□□□□□ -1.22
PSEN1-216ENST00000556066 DESI1Q6ICB0 168 aa7.43□□□□□ -1.22
PSEN1-216ENST00000556066 KANK3Q6NY19 840 aa7.43□□□□□ -1.22
PSEN1-216ENST00000556066 NOTUMQ6P988 496 aa7.43□□□□□ -1.22
PSEN1-216ENST00000556066 LIAT1Q6ZQX7 453 aa7.43□□□□□ -1.22
PSEN1-216ENST00000556066 MRPL10Q7Z7H8 261 aaKnown RBP7.43□□□□□ -1.22
PSEN1-216ENST00000556066 DDX53Q86TM3 631 aaKnown RBP7.43□□□□□ -1.22
PSEN1-216ENST00000556066 C12orf76Q8N812 135 aaPredicted RBP7.43□□□□□ -1.22
PSEN1-216ENST00000556066 ASAP3Q8TDY4 903 aa7.43□□□□□ -1.22
PSEN1-216ENST00000556066 RSPH1Q8WYR4 309 aa7.43□□□□□ -1.22
PSEN1-216ENST00000556066 C8orf76Q96K31 380 aa7.43□□□□□ -1.22
PSEN1-216ENST00000556066 MFSD14AQ96MC6 490 aa7.43□□□□□ -1.22
PSEN1-216ENST00000556066 HSD17B14Q9BPX1 270 aa7.43□□□□□ -1.22
PSEN1-216ENST00000556066 EIF2AQ9BY44 585 aaKnown RBP7.43□□□□□ -1.22
PSEN1-216ENST00000556066 TRIM6Q9C030 488 aaPredicted RBP7.43□□□□□ -1.22
PSEN1-216ENST00000556066 GZF1Q9H116 711 aaPredicted RBP7.43□□□□□ -1.22
PSEN1-216ENST00000556066 ZBP1Q9H171 429 aa7.43□□□□□ -1.22
PSEN1-216ENST00000556066 POLR3FQ9H1D9 316 aaPredicted RBP7.43□□□□□ -1.22
PSEN1-216ENST00000556066 TMEM60Q9H2L4 133 aa7.43□□□□□ -1.22
PSEN1-216ENST00000556066 XPNPEP1Q9NQW7 623 aa7.43□□□□□ -1.22
PSEN1-216ENST00000556066 ANKEF1Q9NU02 776 aa7.43□□□□□ -1.22
PSEN1-216ENST00000556066 KANSL3Q9P2N6 904 aa7.43□□□□□ -1.22
PSEN1-216ENST00000556066 LIMCH1Q9UPQ0 1083 aa7.43□□□□□ -1.22
PSEN1-216ENST00000556066 FAN1Q9Y2M0 1017 aa7.43□□□□□ -1.22
PSEN1-216ENST00000556066 PRG3Q9Y2Y8 225 aaPredicted RBP7.43□□□□□ -1.22
PSEN1-216ENST00000556066 HES2Q9Y543 173 aa7.43□□□□□ -1.22
PSEN1-216ENST00000556066 IPPQ9Y573 584 aa7.43□□□□□ -1.22
PSEN1-216ENST00000556066 CNTNAP2Q9UHC6 1331 aa7.43□□□□□ -1.22
PSEN1-216ENST00000556066 TPRP12270 2363 aaKnown RBP7.42□□□□□ -1.22
PSEN1-216ENST00000556066 TMEM221A6NGB7 291 aa7.42□□□□□ -1.22
PSEN1-216ENST00000556066 LRRIQ4A6NIV6 560 aa7.42□□□□□ -1.22
PSEN1-216ENST00000556066 M0R296 226 aa7.42□□□□□ -1.22
PSEN1-216ENST00000556066 B4GALT5O43286 388 aa7.42□□□□□ -1.22
PSEN1-216ENST00000556066 LYPLA2O95372 231 aa7.42□□□□□ -1.22
PSEN1-216ENST00000556066 ADH1BP00325 375 aa7.42□□□□□ -1.22
PSEN1-216ENST00000556066 CTSAP10619 480 aa7.42□□□□□ -1.22
PSEN1-216ENST00000556066 EPCAMP16422 314 aa7.42□□□□□ -1.22
PSEN1-216ENST00000556066 NCLP19338 710 aaKnown RBP7.42□□□□□ -1.22
PSEN1-216ENST00000556066 GLRA2P23416 452 aa7.42□□□□□ -1.22
PSEN1-216ENST00000556066 KLRC2P26717 231 aa7.42□□□□□ -1.22
PSEN1-216ENST00000556066 AXLP30530 894 aa7.42□□□□□ -1.22
PSEN1-216ENST00000556066 ARL2P36404 184 aa7.42□□□□□ -1.22
PSEN1-216ENST00000556066 ANP32AP39687 249 aaKnown RBP7.42□□□□□ -1.22
PSEN1-216ENST00000556066 MLH1P40692 756 aa7.42□□□□□ -1.22
PSEN1-216ENST00000556066 OR1G1P47890 313 aa7.42□□□□□ -1.22
PSEN1-216ENST00000556066 RARRES1P49788 294 aa7.42□□□□□ -1.22
PSEN1-216ENST00000556066 ZXDAP98168 799 aa7.42□□□□□ -1.22
PSEN1-216ENST00000556066 MBTD1Q05BQ5 628 aa7.42□□□□□ -1.22
PSEN1-216ENST00000556066 ITIH3Q06033 890 aa7.42□□□□□ -1.22
PSEN1-216ENST00000556066 CAPSQ13938 189 aa7.42□□□□□ -1.22
PSEN1-216ENST00000556066 GIT2Q14161 759 aa7.42□□□□□ -1.22
PSEN1-216ENST00000556066 ZNF174Q15697 407 aa7.42□□□□□ -1.22
PSEN1-216ENST00000556066 CABP7Q86V35 215 aa7.42□□□□□ -1.22
PSEN1-216ENST00000556066 CDR2LQ86X02 465 aaPredicted RBP7.42□□□□□ -1.22
PSEN1-216ENST00000556066 CATSPER3Q86XQ3 398 aa7.42□□□□□ -1.22
PSEN1-216ENST00000556066 HACE1Q8IYU2 909 aa7.42□□□□□ -1.22
PSEN1-216ENST00000556066 FAM184AQ8NB25 1140 aa7.42□□□□□ -1.22
PSEN1-216ENST00000556066 SMG8Q8ND04 991 aaKnown RBP7.42□□□□□ -1.22
PSEN1-216ENST00000556066 CNNM3Q8NE01 707 aa7.42□□□□□ -1.22
PSEN1-216ENST00000556066 PRSS33Q8NF86 280 aa7.42□□□□□ -1.22
PSEN1-216ENST00000556066 PBXIP1Q96AQ6 731 aa7.42□□□□□ -1.22
PSEN1-216ENST00000556066 RIPOR3Q96MK2 946 aa7.42□□□□□ -1.22
PSEN1-216ENST00000556066 MTMR9Q96QG7 549 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms