RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 NR3C1P04150 777 aa8.32□□□□□ -1.08
TDP1-214ENST00000556063 EDN1P05305 212 aa8.32□□□□□ -1.08
TDP1-214ENST00000556063 CCDC192P0DO97 292 aa8.32□□□□□ -1.08
TDP1-214ENST00000556063 CCNE1P24864 410 aa8.32□□□□□ -1.08
TDP1-214ENST00000556063 HOXD13P35453 343 aa8.32□□□□□ -1.08
TDP1-214ENST00000556063 DEFB103AP81534 67 aa8.32□□□□□ -1.08
TDP1-214ENST00000556063 FKBP3Q00688 224 aaKnown RBP8.32□□□□□ -1.08
TDP1-214ENST00000556063 PAK1Q13153 545 aa8.32□□□□□ -1.08
TDP1-214ENST00000556063 SURF1Q15526 300 aa8.32□□□□□ -1.08
TDP1-214ENST00000556063 RAB30Q15771 203 aa8.32□□□□□ -1.08
TDP1-214ENST00000556063 TPD52L1Q16890 204 aaPredicted RBP8.32□□□□□ -1.08
TDP1-214ENST00000556063 TCTN1Q2MV58 587 aa8.32□□□□□ -1.08
TDP1-214ENST00000556063 CENPPQ6IPU0 288 aa8.32□□□□□ -1.08
TDP1-214ENST00000556063 FAM117BQ6P1L5 589 aa8.32□□□□□ -1.08
TDP1-214ENST00000556063 SLC39A4Q6P5W5 647 aa8.32□□□□□ -1.08
TDP1-214ENST00000556063 FOXR2Q6PJQ5 311 aa8.32□□□□□ -1.08
TDP1-214ENST00000556063 USP37Q86T82 979 aa8.32□□□□□ -1.08
TDP1-214ENST00000556063 ZNF598Q86UK7 904 aaKnown RBP8.32□□□□□ -1.08
TDP1-214ENST00000556063 SLC9A9Q8IVB4 645 aa8.32□□□□□ -1.08
TDP1-214ENST00000556063 SMYD4Q8IYR2 804 aaPredicted RBP8.32□□□□□ -1.08
TDP1-214ENST00000556063 GPD1LQ8N335 351 aa8.32□□□□□ -1.08
TDP1-214ENST00000556063 NOC3LQ8WTT2 800 aaKnown RBP8.32□□□□□ -1.08
TDP1-214ENST00000556063 NELFBQ8WX92 580 aa8.32□□□□□ -1.08
TDP1-214ENST00000556063 RAD9AQ99638 391 aa8.32□□□□□ -1.08
TDP1-214ENST00000556063 ANP32EQ9BTT0 268 aa8.32□□□□□ -1.08
TDP1-214ENST00000556063 KCTD10Q9H3F6 313 aa8.32□□□□□ -1.08
TDP1-214ENST00000556063 NXF3Q9H4D5 531 aaKnown RBP8.32□□□□□ -1.08
TDP1-214ENST00000556063 PLEKHA5Q9HAU0 1116 aa8.32□□□□□ -1.08
TDP1-214ENST00000556063 SNTG2Q9NY99 539 aa8.32□□□□□ -1.08
TDP1-214ENST00000556063 HSPBP1Q9NZL4 362 aa8.32□□□□□ -1.08
TDP1-214ENST00000556063 MSRAQ9UJ68 235 aa8.32□□□□□ -1.08
TDP1-214ENST00000556063 FRMD4BQ9Y2L6 1034 aa8.32□□□□□ -1.08
TDP1-214ENST00000556063 PPP1R3GB7ZBB8 358 aa8.31□□□□□ -1.08
TDP1-214ENST00000556063 CLIC2O15247 247 aa8.31□□□□□ -1.08
TDP1-214ENST00000556063 XPOTO43592 962 aaKnown RBP8.31□□□□□ -1.08
TDP1-214ENST00000556063 DGKIO75912 1065 aa8.31□□□□□ -1.08
TDP1-214ENST00000556063 IL18RAPO95256 599 aa8.31□□□□□ -1.08
TDP1-214ENST00000556063 CAVIN2O95810 425 aa8.31□□□□□ -1.08
TDP1-214ENST00000556063 BMP6P22004 513 aa8.31□□□□□ -1.08
TDP1-214ENST00000556063 NR2F2P24468 414 aa8.31□□□□□ -1.08
TDP1-214ENST00000556063 ERCC5P28715 1186 aaPredicted RBP8.31□□□□□ -1.08
TDP1-214ENST00000556063 ADSSP30520 456 aa8.31□□□□□ -1.08
TDP1-214ENST00000556063 CYP2J2P51589 502 aa8.31□□□□□ -1.08
TDP1-214ENST00000556063 OSTNP61366 133 aa8.31□□□□□ -1.08
TDP1-214ENST00000556063 RNASELQ05823 741 aaKnown RBP8.31□□□□□ -1.08
TDP1-214ENST00000556063 PPP2R3AQ06190 1150 aa8.31□□□□□ -1.08
TDP1-214ENST00000556063 ADAM9Q13443 819 aa8.31□□□□□ -1.08
TDP1-214ENST00000556063 BTG3Q14201 252 aaPredicted RBP8.31□□□□□ -1.08
TDP1-214ENST00000556063 NFIL3Q16649 462 aa8.31□□□□□ -1.08
TDP1-214ENST00000556063 NOMO2Q5JPE7 1267 aa8.31□□□□□ -1.08
TDP1-214ENST00000556063 AGMOQ6ZNB7 445 aa8.31□□□□□ -1.08
TDP1-214ENST00000556063 NT5DC4Q86YG4 428 aa8.31□□□□□ -1.08
TDP1-214ENST00000556063 CMTR2Q8IYT2 770 aaKnown RBP8.31□□□□□ -1.08
TDP1-214ENST00000556063 LRRC43Q8N309 656 aa8.31□□□□□ -1.08
TDP1-214ENST00000556063 SMG8Q8ND04 991 aaKnown RBP8.31□□□□□ -1.08
TDP1-214ENST00000556063 TMEM174Q8WUU8 243 aa8.31□□□□□ -1.08
TDP1-214ENST00000556063 LPPQ93052 612 aa8.31□□□□□ -1.08
TDP1-214ENST00000556063 FAM193BQ96PV7 902 aaPredicted RBP8.31□□□□□ -1.08
TDP1-214ENST00000556063 GAD1Q99259 594 aa8.31□□□□□ -1.08
TDP1-214ENST00000556063 CBWD1Q9BRT8 395 aa8.31□□□□□ -1.08
TDP1-214ENST00000556063 FAM213AQ9BRX8 229 aa8.31□□□□□ -1.08
TDP1-214ENST00000556063 MKNK1Q9BUB5 465 aa8.31□□□□□ -1.08
TDP1-214ENST00000556063 SEMA6BQ9H3T3 888 aa8.31□□□□□ -1.08
TDP1-214ENST00000556063 PCIF1Q9H4Z3 704 aa8.31□□□□□ -1.08
TDP1-214ENST00000556063 ASB7Q9H672 318 aa8.31□□□□□ -1.08
TDP1-214ENST00000556063 AAASQ9NRG9 546 aa8.31□□□□□ -1.08
TDP1-214ENST00000556063 SLC38A7Q9NVC3 462 aa8.31□□□□□ -1.08
TDP1-214ENST00000556063 PCDH10Q9P2E7 1040 aa8.31□□□□□ -1.08
TDP1-214ENST00000556063 RWDD2AQ9UIY3 292 aa8.31□□□□□ -1.08
TDP1-214ENST00000556063 CPSF3Q9UKF6 684 aaKnown RBP8.31□□□□□ -1.08
TDP1-214ENST00000556063 CTNND2Q9UQB3 1225 aa8.31□□□□□ -1.08
TDP1-214ENST00000556063 INPP5FQ9Y2H2 1132 aa8.31□□□□□ -1.08
TDP1-214ENST00000556063 HES2Q9Y543 173 aa8.31□□□□□ -1.08
TDP1-214ENST00000556063 PCDHA11Q9Y5I1 949 aa8.31□□□□□ -1.08
TDP1-214ENST00000556063 TRIP11Q15643 1979 aa8.31□□□□□ -1.08
TDP1-214ENST00000556063 GOLGA8IPA6NC78 632 aa8.3□□□□□ -1.08
TDP1-214ENST00000556063 GOLGA8JA6NMD2 632 aa8.3□□□□□ -1.08
TDP1-214ENST00000556063 TBKBP1A7MCY6 615 aa8.3□□□□□ -1.08
TDP1-214ENST00000556063 TISP43B9A030 160 aa8.3□□□□□ -1.08
TDP1-214ENST00000556063 TULP1O00294 542 aaPredicted RBP8.3□□□□□ -1.08
TDP1-214ENST00000556063 MAPK13O15264 365 aa8.3□□□□□ -1.08
TDP1-214ENST00000556063 OFD1O75665 1012 aa8.3□□□□□ -1.08
TDP1-214ENST00000556063 GNA14O95837 355 aa8.3□□□□□ -1.08
TDP1-214ENST00000556063 THP07101 528 aa8.3□□□□□ -1.08
TDP1-214ENST00000556063 EPB41P11171 864 aaKnown RBP8.3□□□□□ -1.08
TDP1-214ENST00000556063 FGFR1P11362 822 aa8.3□□□□□ -1.08
TDP1-214ENST00000556063 KRT13P13646 458 aa8.3□□□□□ -1.08
TDP1-214ENST00000556063 ATF7P17544 494 aaPredicted RBP8.3□□□□□ -1.08
TDP1-214ENST00000556063 AKAP5P24588 427 aa8.3□□□□□ -1.08
TDP1-214ENST00000556063 PSMC2P35998 433 aaKnown RBP8.3□□□□□ -1.08
TDP1-214ENST00000556063 MLH1P40692 756 aa8.3□□□□□ -1.08
TDP1-214ENST00000556063 ACOT2P49753 483 aa8.3□□□□□ -1.08
TDP1-214ENST00000556063 HTRA4P83105 476 aaPredicted RBP8.3□□□□□ -1.08
TDP1-214ENST00000556063 SMAD3P84022 425 aaKnown RBP8.3□□□□□ -1.08
TDP1-214ENST00000556063 TYRO3Q06418 890 aa8.3□□□□□ -1.08
TDP1-214ENST00000556063 GRIK3Q13003 919 aa8.3□□□□□ -1.08
TDP1-214ENST00000556063 SNRNP35Q16560 246 aaKnown RBP8.3□□□□□ -1.08
TDP1-214ENST00000556063 DPCR1Q3MIW9 517 aa8.3□□□□□ -1.08
TDP1-214ENST00000556063 ZCWPW2Q504Y3 356 aa8.3□□□□□ -1.08
TDP1-214ENST00000556063 SPOUT1Q5T280 376 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms