RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 TEX13BQ9BXU2 312 aa7.51□□□□□ -1.21
SLIRP-204ENST00000555890 THAP9Q9H5L6 903 aa7.51□□□□□ -1.21
SLIRP-204ENST00000555890 CAPN10Q9HC96 672 aa7.51□□□□□ -1.21
SLIRP-204ENST00000555890 HOMER2Q9NSB8 354 aa7.51□□□□□ -1.21
SLIRP-204ENST00000555890 RNF146Q9NTX7 359 aa7.51□□□□□ -1.21
SLIRP-204ENST00000555890 TBC1D22BQ9NU19 505 aa7.51□□□□□ -1.21
SLIRP-204ENST00000555890 TMEM39AQ9NV64 488 aa7.51□□□□□ -1.21
SLIRP-204ENST00000555890 PANK4Q9NVE7 773 aa7.51□□□□□ -1.21
SLIRP-204ENST00000555890 LIMA1Q9UHB6 759 aaKnown RBP7.51□□□□□ -1.21
SLIRP-204ENST00000555890 TCEAL9Q9UHQ7 104 aa7.51□□□□□ -1.21
SLIRP-204ENST00000555890 VAV3Q9UKW4 847 aa7.51□□□□□ -1.21
SLIRP-204ENST00000555890 POLIQ9UNA4 740 aa7.51□□□□□ -1.21
SLIRP-204ENST00000555890 MAPK8IP1Q9UQF2 711 aa7.51□□□□□ -1.21
SLIRP-204ENST00000555890 OTOGLQ3ZCN5 2332 aa7.51□□□□□ -1.21
SLIRP-204ENST00000555890 NOTCH2Q04721 2471 aa7.5□□□□□ -1.21
SLIRP-204ENST00000555890 GBF1Q92538 1859 aa7.5□□□□□ -1.21
SLIRP-204ENST00000555890 A0A1B0GTH6 734 aa7.5□□□□□ -1.21
SLIRP-204ENST00000555890 SERTM1A2A2V5 107 aa7.5□□□□□ -1.21
SLIRP-204ENST00000555890 LRRC10BA6NIK2 292 aa7.5□□□□□ -1.21
SLIRP-204ENST00000555890 IPO5O00410 1097 aaKnown RBP7.5□□□□□ -1.21
SLIRP-204ENST00000555890 N4BP3O15049 544 aa7.5□□□□□ -1.21
SLIRP-204ENST00000555890 MAFGO15525 162 aa7.5□□□□□ -1.21
SLIRP-204ENST00000555890 CNMDO75829 334 aa7.5□□□□□ -1.21
SLIRP-204ENST00000555890 PSMD10O75832 226 aa7.5□□□□□ -1.21
SLIRP-204ENST00000555890 EYA4O95677 639 aa7.5□□□□□ -1.21
SLIRP-204ENST00000555890 TPM1P09493 284 aa7.5□□□□□ -1.21
SLIRP-204ENST00000555890 SPATA31C1P0DKV0 1188 aa7.5□□□□□ -1.21
SLIRP-204ENST00000555890 ARP10275 920 aa7.5□□□□□ -1.21
SLIRP-204ENST00000555890 MYCLP12524 364 aaPredicted RBP7.5□□□□□ -1.21
SLIRP-204ENST00000555890 SKILP12757 684 aa7.5□□□□□ -1.21
SLIRP-204ENST00000555890 CCND2P30279 289 aa7.5□□□□□ -1.21
SLIRP-204ENST00000555890 RGS2P41220 211 aa7.5□□□□□ -1.21
SLIRP-204ENST00000555890 RPS6P62753 249 aaKnown RBP7.5□□□□□ -1.21
SLIRP-204ENST00000555890 STK4Q13043 487 aa7.5□□□□□ -1.21
SLIRP-204ENST00000555890 C11orf91Q3C1V1 193 aa7.5□□□□□ -1.21
SLIRP-204ENST00000555890 HSP90AA4PQ58FG1 418 aa7.5□□□□□ -1.21
SLIRP-204ENST00000555890 MUM1L1Q5H9M0 696 aa7.5□□□□□ -1.21
SLIRP-204ENST00000555890 ARHGEF16Q5VV41 709 aa7.5□□□□□ -1.21
SLIRP-204ENST00000555890 SPECC1LQ69YQ0 1117 aa7.5□□□□□ -1.21
SLIRP-204ENST00000555890 FOXR2Q6PJQ5 311 aa7.5□□□□□ -1.21
SLIRP-204ENST00000555890 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.5□□□□□ -1.21
SLIRP-204ENST00000555890 KCNK18Q7Z418 384 aa7.5□□□□□ -1.21
SLIRP-204ENST00000555890 GPR142Q7Z601 462 aa7.5□□□□□ -1.21
SLIRP-204ENST00000555890 NLRX1Q86UT6 975 aa7.5□□□□□ -1.21
SLIRP-204ENST00000555890 PPFIBP1Q86W92 1011 aa7.5□□□□□ -1.21
SLIRP-204ENST00000555890 CREBRFQ8IUR6 639 aa7.5□□□□□ -1.21
SLIRP-204ENST00000555890 MYOCDQ8IZQ8 938 aa7.5□□□□□ -1.21
SLIRP-204ENST00000555890 GUF1Q8N442 669 aaKnown RBP7.5□□□□□ -1.21
SLIRP-204ENST00000555890 CSGALNACT2Q8N6G5 542 aa7.5□□□□□ -1.21
SLIRP-204ENST00000555890 MB21D1Q8N884 522 aa7.5□□□□□ -1.21
SLIRP-204ENST00000555890 SYT2Q8N9I0 419 aaPredicted RBP7.5□□□□□ -1.21
SLIRP-204ENST00000555890 GPRC5AQ8NFJ5 357 aa7.5□□□□□ -1.21
SLIRP-204ENST00000555890 SOCS4Q8WXH5 440 aa7.5□□□□□ -1.21
SLIRP-204ENST00000555890 DNAJC19Q96DA6 116 aa7.5□□□□□ -1.21
SLIRP-204ENST00000555890 BBC3Q96PG8 261 aaPredicted RBP7.5□□□□□ -1.21
SLIRP-204ENST00000555890 NACC1Q96RE7 527 aa7.5□□□□□ -1.21
SLIRP-204ENST00000555890 TAAR1Q96RJ0 339 aa7.5□□□□□ -1.21
SLIRP-204ENST00000555890 RMDN3Q96TC7 470 aa7.5□□□□□ -1.21
SLIRP-204ENST00000555890 SRRTQ9BXP5 876 aaKnown RBP7.5□□□□□ -1.21
SLIRP-204ENST00000555890 KCNF1Q9H3M0 494 aa7.5□□□□□ -1.21
SLIRP-204ENST00000555890 ACAD9Q9H845 621 aa7.5□□□□□ -1.21
SLIRP-204ENST00000555890 SLC39A2Q9NP94 309 aa7.5□□□□□ -1.21
SLIRP-204ENST00000555890 JADE2Q9NQC1 790 aa7.5□□□□□ -1.21
SLIRP-204ENST00000555890 CUEDC1Q9NWM3 386 aaPredicted RBP7.5□□□□□ -1.21
SLIRP-204ENST00000555890 FBXO40Q9UH90 709 aa7.5□□□□□ -1.21
SLIRP-204ENST00000555890 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.5□□□□□ -1.216e-18■□□□□ 8
SLIRP-204ENST00000555890 UBIAD1Q9Y5Z9 338 aa7.5□□□□□ -1.21
SLIRP-204ENST00000555890 FRMPD4Q14CM0 1322 aa7.5□□□□□ -1.21
SLIRP-204ENST00000555890 MYH11P35749 1972 aa7.5□□□□□ -1.21
SLIRP-204ENST00000555890 CCP110O43303 1012 aa7.49□□□□□ -1.21
SLIRP-204ENST00000555890 CHMP2AO43633 222 aa7.49□□□□□ -1.21
SLIRP-204ENST00000555890 OFD1O75665 1012 aa7.49□□□□□ -1.21
SLIRP-204ENST00000555890 STAM2O75886 525 aa7.49□□□□□ -1.21
SLIRP-204ENST00000555890 SLITRK3O94933 977 aa7.49□□□□□ -1.21
SLIRP-204ENST00000555890 HOXC6P09630 235 aa7.49□□□□□ -1.21
SLIRP-204ENST00000555890 FCER1AP12319 257 aa7.49□□□□□ -1.21
SLIRP-204ENST00000555890 PCSK2P16519 638 aa7.49□□□□□ -1.21
SLIRP-204ENST00000555890 GAP43P17677 238 aa7.49□□□□□ -1.21
SLIRP-204ENST00000555890 CYP11B2P19099 503 aa7.49□□□□□ -1.21
SLIRP-204ENST00000555890 EIF2AK2P19525 551 aaKnown RBP7.49□□□□□ -1.21
SLIRP-204ENST00000555890 ADCYAP1R1P41586 468 aa7.49□□□□□ -1.21
SLIRP-204ENST00000555890 COPB1P53618 953 aaKnown RBP7.49□□□□□ -1.21
SLIRP-204ENST00000555890 SLC12A3P55017 1021 aa7.49□□□□□ -1.21
SLIRP-204ENST00000555890 LRRC63Q05C16 580 aa7.49□□□□□ -1.21
SLIRP-204ENST00000555890 LRMPQ12912 555 aa7.49□□□□□ -1.21
SLIRP-204ENST00000555890 COASYQ13057 564 aa7.49□□□□□ -1.21
SLIRP-204ENST00000555890 PABPC4Q13310 644 aaKnown RBP eCLIP7.49□□□□□ -1.213e-8■□□□□ 8.6
SLIRP-204ENST00000555890 MTMR1Q13613 665 aa7.49□□□□□ -1.21
SLIRP-204ENST00000555890 BAATQ14032 418 aaPredicted RBP7.49□□□□□ -1.21
SLIRP-204ENST00000555890 PLS1Q14651 629 aa7.49□□□□□ -1.21
SLIRP-204ENST00000555890 TMEM132BQ14DG7 1078 aa7.49□□□□□ -1.21
SLIRP-204ENST00000555890 PGM5Q15124 567 aa7.49□□□□□ -1.21
SLIRP-204ENST00000555890 KRT31Q15323 416 aa7.49□□□□□ -1.21
SLIRP-204ENST00000555890 TLR1Q15399 786 aa7.49□□□□□ -1.21
SLIRP-204ENST00000555890 TEAD4Q15561 434 aa7.49□□□□□ -1.21
SLIRP-204ENST00000555890 TCP11X2Q5H9J9 407 aa7.49□□□□□ -1.21
SLIRP-204ENST00000555890 FAM26DQ5JW98 314 aa7.49□□□□□ -1.21
SLIRP-204ENST00000555890 DNTTIP2Q5QJE6 756 aaKnown RBP7.49□□□□□ -1.21
SLIRP-204ENST00000555890 FAM26FQ5R3K3 315 aa7.49□□□□□ -1.21
SLIRP-204ENST00000555890 PPP1R26Q5T8A7 1209 aaPredicted RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms