RNA–Protein interactions for RNA: ENST00000555816.5

ATXN3-233, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-233ENST00000555816 LAMB4A4D0S4 1761 aa6.17□□□□□ -1.42
ATXN3-233ENST00000555816 ANKRD36CQ5JPF3 1778 aa6.17□□□□□ -1.42
ATXN3-233ENST00000555816 SUV39H1O43463 412 aa6.17□□□□□ -1.42
ATXN3-233ENST00000555816 ZNF623O75123 536 aa6.17□□□□□ -1.42
ATXN3-233ENST00000555816 KLHL18O94889 574 aa6.17□□□□□ -1.42
ATXN3-233ENST00000555816 CETPP11597 493 aa6.17□□□□□ -1.42
ATXN3-233ENST00000555816 COL6A1P12109 1028 aa6.17□□□□□ -1.42
ATXN3-233ENST00000555816 RBM5P52756 815 aaKnown RBP eCLIP6.17□□□□□ -1.42
ATXN3-233ENST00000555816 PPP2R2AP63151 447 aa6.17□□□□□ -1.42
ATXN3-233ENST00000555816 SPIRE1Q08AE8 756 aa6.17□□□□□ -1.42
ATXN3-233ENST00000555816 HS1BP3Q53T59 392 aa6.17□□□□□ -1.42
ATXN3-233ENST00000555816 Q6ZUG5 572 aa6.17□□□□□ -1.42
ATXN3-233ENST00000555816 OTOP3Q7RTS5 596 aa6.17□□□□□ -1.42
ATXN3-233ENST00000555816 UBE2Q1Q7Z7E8 422 aa6.17□□□□□ -1.42
ATXN3-233ENST00000555816 REXO1L1PQ8IX06 675 aa6.17□□□□□ -1.42
ATXN3-233ENST00000555816 CERS5Q8N5B7 392 aa6.17□□□□□ -1.42
ATXN3-233ENST00000555816 AJUBAQ96IF1 538 aa6.17□□□□□ -1.42
ATXN3-233ENST00000555816 MPHOSPH8Q99549 860 aa6.17□□□□□ -1.42
ATXN3-233ENST00000555816 R3HCC1Q9Y3T6 440 aaKnown RBP6.17□□□□□ -1.42
ATXN3-233ENST00000555816 PCDHAC2Q9Y5I4 1007 aa6.17□□□□□ -1.42
ATXN3-233ENST00000555816 KIAA0100Q14667 2235 aaKnown RBP6.17□□□□□ -1.42
ATXN3-233ENST00000555816 LRRC37AA6NMS7 1700 aa6.16□□□□□ -1.42
ATXN3-233ENST00000555816 B2RBV5 119 aa6.16□□□□□ -1.42
ATXN3-233ENST00000555816 FBXO21O94952 628 aa6.16□□□□□ -1.42
ATXN3-233ENST00000555816 GJB6O95452 261 aa6.16□□□□□ -1.42
ATXN3-233ENST00000555816 CCL5P13501 91 aa6.16□□□□□ -1.42
ATXN3-233ENST00000555816 IL1R1P14778 569 aa6.16□□□□□ -1.42
ATXN3-233ENST00000555816 FAHP16930 419 aa6.16□□□□□ -1.42
ATXN3-233ENST00000555816 KLRK1P26718 216 aa6.16□□□□□ -1.42
ATXN3-233ENST00000555816 PSMC4P43686 418 aa6.16□□□□□ -1.42
ATXN3-233ENST00000555816 HMGA2P52926 109 aa6.16□□□□□ -1.42
ATXN3-233ENST00000555816 UBXN2AP68543 259 aa6.16□□□□□ -1.42
ATXN3-233ENST00000555816 SLC10A6Q3KNW5 377 aa6.16□□□□□ -1.42
ATXN3-233ENST00000555816 MRM1Q6IN84 353 aaKnown RBP6.16□□□□□ -1.42
ATXN3-233ENST00000555816 C17orf99Q6UX52 265 aa6.16□□□□□ -1.42
ATXN3-233ENST00000555816 TMC5Q6UXY8 1006 aa6.16□□□□□ -1.42
ATXN3-233ENST00000555816 C15orf52Q6ZUT6 534 aaKnown RBP6.16□□□□□ -1.42
ATXN3-233ENST00000555816 PROSER1Q86XN7 944 aa6.16□□□□□ -1.42
ATXN3-233ENST00000555816 ERO1BQ86YB8 467 aa6.16□□□□□ -1.42
ATXN3-233ENST00000555816 UHMK1Q8TAS1 419 aaKnown RBP6.16□□□□□ -1.42
ATXN3-233ENST00000555816 RAET1EQ8TD07 263 aa6.16□□□□□ -1.42
ATXN3-233ENST00000555816 CLEC4DQ8WXI8 215 aa6.16□□□□□ -1.42
ATXN3-233ENST00000555816 ZNF747Q9BV97 191 aa6.16□□□□□ -1.42
ATXN3-233ENST00000555816 ARHGAP39Q9C0H5 1083 aa6.16□□□□□ -1.42
ATXN3-233ENST00000555816 ZNF70Q9UC06 446 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-233ENST00000555816 WASF3Q9UPY6 502 aa6.16□□□□□ -1.42
ATXN3-233ENST00000555816 MAP3K2Q9Y2U5 619 aa6.16□□□□□ -1.42
ATXN3-233ENST00000555816 SLC4A7Q9Y6M7 1214 aa6.16□□□□□ -1.42
ATXN3-233ENST00000555816 MKI67P46013 3256 aaKnown RBP6.16□□□□□ -1.42
ATXN3-233ENST00000555816 KDM3BQ7LBC6 1761 aa6.16□□□□□ -1.42
ATXN3-233ENST00000555816 COL4A1P02462 1669 aa6.15□□□□□ -1.42
ATXN3-233ENST00000555816 A0A1W2PQU0 124 aa6.15□□□□□ -1.42
ATXN3-233ENST00000555816 BTBD19C9JJ37 291 aa6.15□□□□□ -1.42
ATXN3-233ENST00000555816 ELL2O00472 640 aaPredicted RBP6.15□□□□□ -1.42
ATXN3-233ENST00000555816 MUSKO15146 869 aa6.15□□□□□ -1.42
ATXN3-233ENST00000555816 SGPL1O95470 568 aa6.15□□□□□ -1.42
ATXN3-233ENST00000555816 KNG1P01042 644 aa6.15□□□□□ -1.42
ATXN3-233ENST00000555816 IGKV5-2P06315 115 aa6.15□□□□□ -1.42
ATXN3-233ENST00000555816 CHRNDQ07001 517 aa6.15□□□□□ -1.42
ATXN3-233ENST00000555816 NEXNQ0ZGT2 675 aa6.15□□□□□ -1.42
ATXN3-233ENST00000555816 SNAPC2Q13487 334 aa6.15□□□□□ -1.42
ATXN3-233ENST00000555816 VGLL4Q14135 290 aa6.15□□□□□ -1.42
ATXN3-233ENST00000555816 KIZQ2M2Z5 673 aa6.15□□□□□ -1.42
ATXN3-233ENST00000555816 KSR2Q6VAB6 950 aa6.15□□□□□ -1.42
ATXN3-233ENST00000555816 ZNF804AQ7Z570 1209 aa6.15□□□□□ -1.42
ATXN3-233ENST00000555816 RALYLQ86SE5 291 aaKnown RBP6.15□□□□□ -1.42
ATXN3-233ENST00000555816 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.15□□□□□ -1.42
ATXN3-233ENST00000555816 PIP4K2CQ8TBX8 421 aa6.15□□□□□ -1.42
ATXN3-233ENST00000555816 U2AF1L4Q8WU68 220 aaKnown RBP6.15□□□□□ -1.42
ATXN3-233ENST00000555816 RUNDC1Q96C34 613 aa6.15□□□□□ -1.42
ATXN3-233ENST00000555816 IER2Q9BTL4 223 aa6.15□□□□□ -1.42
ATXN3-233ENST00000555816 JAM3Q9BX67 310 aa6.15□□□□□ -1.42
ATXN3-233ENST00000555816 PLA2G12BQ9BX93 195 aa6.15□□□□□ -1.42
ATXN3-233ENST00000555816 KATNBL1Q9H079 304 aa6.15□□□□□ -1.42
ATXN3-233ENST00000555816 STAP2Q9UGK3 403 aa6.15□□□□□ -1.42
ATXN3-233ENST00000555816 STXBP5LQ9Y2K9 1186 aa6.15□□□□□ -1.42
ATXN3-233ENST00000555816 RIPOR2Q9Y4F9 1068 aa6.15□□□□□ -1.42
ATXN3-233ENST00000555816 SCN9AQ15858 1988 aa6.15□□□□□ -1.43
ATXN3-233ENST00000555816 SSC5DA1L4H1 1573 aa6.14□□□□□ -1.43
ATXN3-233ENST00000555816 PI4KAP2A4QPH2 592 aa6.14□□□□□ -1.43
ATXN3-233ENST00000555816 SLC27A2O14975 620 aa6.14□□□□□ -1.43
ATXN3-233ENST00000555816 KLF4O43474 513 aa6.14□□□□□ -1.43
ATXN3-233ENST00000555816 DLX3O60479 287 aa6.14□□□□□ -1.43
ATXN3-233ENST00000555816 TAF5LO75529 589 aa6.14□□□□□ -1.43
ATXN3-233ENST00000555816 CSF1RP07333 972 aa6.14□□□□□ -1.43
ATXN3-233ENST00000555816 ZNF853P0CG23 659 aa6.14□□□□□ -1.43
ATXN3-233ENST00000555816 FGFR1P11362 822 aa6.14□□□□□ -1.43
ATXN3-233ENST00000555816 GRIA2P42262 883 aa6.14□□□□□ -1.43
ATXN3-233ENST00000555816 EPHA5P54756 1037 aa6.14□□□□□ -1.43
ATXN3-233ENST00000555816 PPIL2Q13356 520 aa6.14□□□□□ -1.43
ATXN3-233ENST00000555816 PAN2Q504Q3 1202 aaKnown RBP6.14□□□□□ -1.43
ATXN3-233ENST00000555816 CCDC30Q5VVM6 783 aa6.14□□□□□ -1.43
ATXN3-233ENST00000555816 LBX2Q6XYB7 198 aa6.14□□□□□ -1.43
ATXN3-233ENST00000555816 ANKS3Q6ZW76 656 aa6.14□□□□□ -1.43
ATXN3-233ENST00000555816 DEFB123Q8N688 67 aa6.14□□□□□ -1.43
ATXN3-233ENST00000555816 PI4KAP1Q8N8J0 262 aa6.14□□□□□ -1.43
ATXN3-233ENST00000555816 Q8TCH9 128 aa6.14□□□□□ -1.43
ATXN3-233ENST00000555816 MICAL1Q8TDZ2 1067 aa6.14□□□□□ -1.43
ATXN3-233ENST00000555816 HOOK2Q96ED9 719 aa6.14□□□□□ -1.43
ATXN3-233ENST00000555816 PHF20Q9BVI0 1012 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms