RNA–Protein interactions for RNA: ENST00000555688.1

LINC00641-202, long intergenic non-protein coding RNA 641, humanhuman

TSL 1 (best) BASIC

Gene LINC00641, Length 1,763 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-202ENST00000555688 CRACR2AQ9BSW2 395 aa8.52□□□□□ -1.05
LINC00641-202ENST00000555688 ST6GALNAC4Q9H4F1 302 aa8.52□□□□□ -1.05
LINC00641-202ENST00000555688 NHEJ1Q9H9Q4 299 aaPredicted RBP8.52□□□□□ -1.05
LINC00641-202ENST00000555688 JPH1Q9HDC5 661 aaPredicted RBP8.52□□□□□ -1.05
LINC00641-202ENST00000555688 LZTFL1Q9NQ48 299 aa8.52□□□□□ -1.05
LINC00641-202ENST00000555688 AGPAT3Q9NRZ7 376 aa8.52□□□□□ -1.05
LINC00641-202ENST00000555688 ARHGAP20Q9P2F6 1191 aa8.52□□□□□ -1.05
LINC00641-202ENST00000555688 GABBR1Q9UBS5 961 aa8.52□□□□□ -1.05
LINC00641-202ENST00000555688 SLC9A2Q9UBY0 812 aa8.52□□□□□ -1.05
LINC00641-202ENST00000555688 LOC100996750A0A140TA64 210 aa8.51□□□□□ -1.05
LINC00641-202ENST00000555688 A6NHS1 94 aa8.51□□□□□ -1.05
LINC00641-202ENST00000555688 LRRC53A6NM62 1247 aa8.51□□□□□ -1.05
LINC00641-202ENST00000555688 EIF3CLB5ME19 914 aaKnown RBP8.51□□□□□ -1.05
LINC00641-202ENST00000555688 ZNF263O14978 683 aa8.51□□□□□ -1.05
LINC00641-202ENST00000555688 KHNYNO15037 678 aaKnown RBP8.51□□□□□ -1.05
LINC00641-202ENST00000555688 BNIP3LO60238 219 aa8.51□□□□□ -1.05
LINC00641-202ENST00000555688 PSAPP07602 524 aa8.51□□□□□ -1.05
LINC00641-202ENST00000555688 PLEKP08567 350 aaPredicted RBP8.51□□□□□ -1.05
LINC00641-202ENST00000555688 GNG11P61952 73 aa8.51□□□□□ -1.05
LINC00641-202ENST00000555688 IRX3P78415 501 aaPredicted RBP8.51□□□□□ -1.05
LINC00641-202ENST00000555688 GTF2BQ00403 316 aa8.51□□□□□ -1.05
LINC00641-202ENST00000555688 SFSWAPQ12872 951 aaKnown RBP8.51□□□□□ -1.05
LINC00641-202ENST00000555688 GPR162Q16538 588 aa8.51□□□□□ -1.05
LINC00641-202ENST00000555688 GNPTABQ3T906 1256 aa8.51□□□□□ -1.05
LINC00641-202ENST00000555688 XKR9Q5GH70 373 aa8.51□□□□□ -1.05
LINC00641-202ENST00000555688 PDXDC1Q6P996 788 aa8.51□□□□□ -1.05
LINC00641-202ENST00000555688 ZNF662Q6ZS27 426 aa8.51□□□□□ -1.05
LINC00641-202ENST00000555688 STXBP4Q6ZWJ1 553 aa8.51□□□□□ -1.05
LINC00641-202ENST00000555688 ARMC9Q7Z3E5 817 aa8.51□□□□□ -1.05
LINC00641-202ENST00000555688 NCAPG2Q86XI2 1143 aa8.51□□□□□ -1.05
LINC00641-202ENST00000555688 CCDC60Q8IWA6 550 aaPredicted RBP8.51□□□□□ -1.05
LINC00641-202ENST00000555688 CCDC170Q8IYT3 715 aa8.51□□□□□ -1.05
LINC00641-202ENST00000555688 NEK11Q8NG66 645 aa8.51□□□□□ -1.05
LINC00641-202ENST00000555688 ZNF526Q8TF50 670 aaPredicted RBP8.51□□□□□ -1.05
LINC00641-202ENST00000555688 EIF3CQ99613 913 aaKnown RBP8.51□□□□□ -1.05
LINC00641-202ENST00000555688 TIPINQ9BVW5 301 aa8.51□□□□□ -1.05
LINC00641-202ENST00000555688 KRTAP4-6Q9BYQ5 205 aa8.51□□□□□ -1.05
LINC00641-202ENST00000555688 GBP3Q9H0R5 595 aa8.51□□□□□ -1.05
LINC00641-202ENST00000555688 GANQ9H2C0 597 aa8.51□□□□□ -1.05
LINC00641-202ENST00000555688 METTL14Q9HCE5 456 aaKnown RBP8.51□□□□□ -1.05
LINC00641-202ENST00000555688 GPRC5CQ9NQ84 441 aa8.51□□□□□ -1.05
LINC00641-202ENST00000555688 LARSQ9P2J5 1176 aaKnown RBP8.51□□□□□ -1.05
LINC00641-202ENST00000555688 SYNGAP1Q96PV0 1343 aa8.51□□□□□ -1.05
LINC00641-202ENST00000555688 DNAJC25-GNG10A0A024R161 153 aa8.5□□□□□ -1.05
LINC00641-202ENST00000555688 IGKV6D-21A0A0A0MT36 114 aa8.5□□□□□ -1.05
LINC00641-202ENST00000555688 DCDC2BA2VCK2 349 aa8.5□□□□□ -1.05
LINC00641-202ENST00000555688 IQCA1LA6NCM1 817 aa8.5□□□□□ -1.05
LINC00641-202ENST00000555688 TLR2O60603 784 aa8.5□□□□□ -1.05
LINC00641-202ENST00000555688 XYLBO75191 536 aa8.5□□□□□ -1.05
LINC00641-202ENST00000555688 AFPP02771 609 aaKnown RBP8.5□□□□□ -1.05
LINC00641-202ENST00000555688 SLC9A1P19634 815 aa8.5□□□□□ -1.05
LINC00641-202ENST00000555688 PSMC2P35998 433 aaKnown RBP8.5□□□□□ -1.05
LINC00641-202ENST00000555688 NCKAP1LP55160 1127 aa8.5□□□□□ -1.05
LINC00641-202ENST00000555688 PPP2R3AQ06190 1150 aa8.5□□□□□ -1.05
LINC00641-202ENST00000555688 MYBPC2Q14324 1141 aa8.5□□□□□ -1.05
LINC00641-202ENST00000555688 ASTE1Q2TB18 679 aaPredicted RBP8.5□□□□□ -1.05
LINC00641-202ENST00000555688 HGSNATQ68CP4 663 aa8.5□□□□□ -1.05
LINC00641-202ENST00000555688 RRAGAQ7L523 313 aa8.5□□□□□ -1.05
LINC00641-202ENST00000555688 FASTKD5Q7L8L6 764 aaKnown RBP8.5□□□□□ -1.05
LINC00641-202ENST00000555688 TRMT1LQ7Z2T5 733 aaKnown RBP8.5□□□□□ -1.05
LINC00641-202ENST00000555688 HAUS6Q7Z4H7 955 aa8.5□□□□□ -1.05
LINC00641-202ENST00000555688 ZNF438Q7Z4V0 828 aa8.5□□□□□ -1.05
LINC00641-202ENST00000555688 PNMA8AQ86V59 439 aaPredicted RBP8.5□□□□□ -1.05
LINC00641-202ENST00000555688 SYN2Q92777 582 aaPredicted RBP8.5□□□□□ -1.05
LINC00641-202ENST00000555688 NTPCRQ9BSD7 190 aaKnown RBP8.5□□□□□ -1.05
LINC00641-202ENST00000555688 PAGR1Q9BTK6 254 aa8.5□□□□□ -1.05
LINC00641-202ENST00000555688 LSM14BQ9BX40 385 aaKnown RBP8.5□□□□□ -1.05
LINC00641-202ENST00000555688 PLCB1Q9NQ66 1216 aa8.5□□□□□ -1.05
LINC00641-202ENST00000555688 ZNHIT6Q9NWK9 470 aaKnown RBP8.5□□□□□ -1.05
LINC00641-202ENST00000555688 CEP72Q9P209 647 aa8.5□□□□□ -1.05
LINC00641-202ENST00000555688 ZNF215Q9UL58 517 aaPredicted RBP8.5□□□□□ -1.05
LINC00641-202ENST00000555688 MYH9P35579 1960 aaKnown RBP8.5□□□□□ -1.05
LINC00641-202ENST00000555688 TISP43B9A030 160 aa8.5□□□□□ -1.05
LINC00641-202ENST00000555688 K7ENM7 598 aa8.5□□□□□ -1.05
LINC00641-202ENST00000555688 SORBS3O60504 671 aa8.5□□□□□ -1.05
LINC00641-202ENST00000555688 LCA5LO95447 670 aa8.5□□□□□ -1.05
LINC00641-202ENST00000555688 SLC25A27O95847 323 aa8.5□□□□□ -1.05
LINC00641-202ENST00000555688 SUPT20HL2P0C7V6 817 aa8.5□□□□□ -1.05
LINC00641-202ENST00000555688 EPB41P11171 864 aaKnown RBP8.5□□□□□ -1.05
LINC00641-202ENST00000555688 ACTN1P12814 892 aa8.5□□□□□ -1.05
LINC00641-202ENST00000555688 XRCC5P13010 732 aaKnown RBP8.5□□□□□ -1.05
LINC00641-202ENST00000555688 PON1P27169 355 aa8.5□□□□□ -1.05
LINC00641-202ENST00000555688 CASQ1P31415 396 aa8.5□□□□□ -1.05
LINC00641-202ENST00000555688 MAPK8P45983 427 aa8.5□□□□□ -1.05
LINC00641-202ENST00000555688 PEX3P56589 373 aa8.5□□□□□ -1.05
LINC00641-202ENST00000555688 ALCAMQ13740 583 aa8.5□□□□□ -1.05
LINC00641-202ENST00000555688 SEPT14Q6ZU15 432 aa8.5□□□□□ -1.05
LINC00641-202ENST00000555688 CYFIP1Q7L576 1253 aa8.5□□□□□ -1.05
LINC00641-202ENST00000555688 OTUD6AQ7L8S5 288 aa8.5□□□□□ -1.05
LINC00641-202ENST00000555688 C12orf56Q8IXR9 622 aa8.5□□□□□ -1.05
LINC00641-202ENST00000555688 FAM186BQ8IYM0 893 aa8.5□□□□□ -1.05
LINC00641-202ENST00000555688 LRRN4CLQ8ND94 238 aa8.5□□□□□ -1.05
LINC00641-202ENST00000555688 TMEM161BQ8NDZ6 487 aa8.5□□□□□ -1.05
LINC00641-202ENST00000555688 GOLGA5Q8TBA6 731 aa8.5□□□□□ -1.05
LINC00641-202ENST00000555688 BSNDQ8WZ55 320 aa8.5□□□□□ -1.05
LINC00641-202ENST00000555688 ATP6V0A1Q93050 837 aa8.5□□□□□ -1.05
LINC00641-202ENST00000555688 DRC1Q96MC2 740 aa8.5□□□□□ -1.05
LINC00641-202ENST00000555688 CEP89Q96ST8 783 aa8.5□□□□□ -1.05
LINC00641-202ENST00000555688 CFHR5Q9BXR6 569 aa8.5□□□□□ -1.05
LINC00641-202ENST00000555688 SIX2Q9NPC8 291 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms