RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 PITRM1Q5JRX3 1037 aa5.35□□□□□ -1.55
SNX6-204ENST00000555541 ABHD17BQ5VST6 288 aa5.35□□□□□ -1.55
SNX6-204ENST00000555541 RNF169Q8NCN4 708 aa5.35□□□□□ -1.55
SNX6-204ENST00000555541 SLC35B2Q8TB61 432 aa5.35□□□□□ -1.55
SNX6-204ENST00000555541 NINJ1Q92982 152 aa5.35□□□□□ -1.55
SNX6-204ENST00000555541 MRFAP1L1Q96HT8 127 aa5.35□□□□□ -1.55
SNX6-204ENST00000555541 WNT8AQ9H1J5 351 aa5.35□□□□□ -1.55
SNX6-204ENST00000555541 GPRC5DQ9NZD1 345 aa5.35□□□□□ -1.55
SNX6-204ENST00000555541 ARHGEF17Q96PE2 2063 aaPredicted RBP5.35□□□□□ -1.55
SNX6-204ENST00000555541 PNPLA7Q6ZV29 1317 aa5.34□□□□□ -1.55
SNX6-204ENST00000555541 DRGXA6NNA5 263 aa5.34□□□□□ -1.55
SNX6-204ENST00000555541 ESRRBO95718 433 aa5.34□□□□□ -1.55
SNX6-204ENST00000555541 DDX6P26196 483 aaKnown RBP eCLIP5.34□□□□□ -1.55
SNX6-204ENST00000555541 AVPR1BP47901 424 aa5.34□□□□□ -1.55
SNX6-204ENST00000555541 LSSP48449 732 aa5.34□□□□□ -1.55
SNX6-204ENST00000555541 MEF2AQ02078 507 aaPredicted RBP5.34□□□□□ -1.55
SNX6-204ENST00000555541 TCEA2Q15560 299 aa5.34□□□□□ -1.55
SNX6-204ENST00000555541 EFCAB12Q6NXP0 572 aa5.34□□□□□ -1.55
SNX6-204ENST00000555541 FRMD7Q6ZUT3 714 aa5.34□□□□□ -1.55
SNX6-204ENST00000555541 C1QL2Q7Z5L3 287 aa5.34□□□□□ -1.55
SNX6-204ENST00000555541 GLB1L2Q8IW92 636 aa5.34□□□□□ -1.55
SNX6-204ENST00000555541 SRRM1Q8IYB3 904 aaKnown RBP5.34□□□□□ -1.55
SNX6-204ENST00000555541 MDM1Q8TC05 714 aa5.34□□□□□ -1.55
SNX6-204ENST00000555541 FUBP1Q96AE4 644 aaKnown RBP5.34□□□□□ -1.55
SNX6-204ENST00000555541 PIF1Q9H611 641 aa5.34□□□□□ -1.55
SNX6-204ENST00000555541 CDY2AQ9Y6F7 541 aa5.34□□□□□ -1.55
SNX6-204ENST00000555541 SETD1BQ9UPS6 1966 aaKnown RBP5.33□□□□□ -1.56
SNX6-204ENST00000555541 MAST3O60307 1309 aa5.33□□□□□ -1.56
SNX6-204ENST00000555541 GASTP01350 101 aa5.33□□□□□ -1.56
SNX6-204ENST00000555541 CFIP05156 583 aa5.33□□□□□ -1.56
SNX6-204ENST00000555541 NHLH1Q02575 133 aa5.33□□□□□ -1.56
SNX6-204ENST00000555541 RESTQ13127 1097 aa5.33□□□□□ -1.56
SNX6-204ENST00000555541 PDCD1Q15116 288 aa5.33□□□□□ -1.56
SNX6-204ENST00000555541 PRAMEF14Q5SWL7 426 aa5.33□□□□□ -1.56
SNX6-204ENST00000555541 AGAP9Q5VTM2 703 aa5.33□□□□□ -1.56
SNX6-204ENST00000555541 CNNM4Q6P4Q7 775 aa5.33□□□□□ -1.56
SNX6-204ENST00000555541 BOLLQ8N9W6 283 aaKnown RBP5.33□□□□□ -1.56
SNX6-204ENST00000555541 OR14C36Q8NHC7 312 aa5.33□□□□□ -1.56
SNX6-204ENST00000555541 TFAP2CQ92754 450 aa5.33□□□□□ -1.56
SNX6-204ENST00000555541 CDC5LQ99459 802 aaKnown RBP5.33□□□□□ -1.56
SNX6-204ENST00000555541 TARS2Q9BW92 718 aaKnown RBP5.33□□□□□ -1.56
SNX6-204ENST00000555541 ZSWIM4Q9H7M6 989 aa5.33□□□□□ -1.56
SNX6-204ENST00000555541 USP15Q9Y4E8 981 aaPredicted RBP5.33□□□□□ -1.56
SNX6-204ENST00000555541 FPGT-TNNI3KV9GXZ4 949 aa5.33□□□□□ -1.56
SNX6-204ENST00000555541 ATRNL1Q5VV63 1379 aa5.32□□□□□ -1.56
SNX6-204ENST00000555541 ADCY6O43306 1168 aa5.32□□□□□ -1.56
SNX6-204ENST00000555541 RBMXL2O75526 392 aaKnown RBP5.32□□□□□ -1.56
SNX6-204ENST00000555541 FKBP9O95302 570 aa5.32□□□□□ -1.56
SNX6-204ENST00000555541 MGAT1P26572 445 aa5.32□□□□□ -1.56
SNX6-204ENST00000555541 CCDC144BQ3MJ40 725 aa5.32□□□□□ -1.56
SNX6-204ENST00000555541 BROXQ5VW32 411 aa5.32□□□□□ -1.56
SNX6-204ENST00000555541 B3GNTL1Q67FW5 361 aaPredicted RBP5.32□□□□□ -1.56
SNX6-204ENST00000555541 FKBP9P1Q75LS8 142 aa5.32□□□□□ -1.56
SNX6-204ENST00000555541 GPR149Q86SP6 731 aa5.32□□□□□ -1.56
SNX6-204ENST00000555541 Q8N9P0 234 aaPredicted RBP5.32□□□□□ -1.56
SNX6-204ENST00000555541 CAVIN3Q969G5 261 aa5.32□□□□□ -1.56
SNX6-204ENST00000555541 RSAD1Q9HA92 442 aa5.32□□□□□ -1.56
SNX6-204ENST00000555541 POGKQ9P215 609 aa5.32□□□□□ -1.56
SNX6-204ENST00000555541 CCDC78A2IDD5 438 aa5.31□□□□□ -1.56
SNX6-204ENST00000555541 MYADML2A6NDP7 307 aa5.31□□□□□ -1.56
SNX6-204ENST00000555541 PRAMEF4O60810 478 aa5.31□□□□□ -1.56
SNX6-204ENST00000555541 LPLP06858 475 aa5.31□□□□□ -1.56
SNX6-204ENST00000555541 CTGFP29279 349 aa5.31□□□□□ -1.56
SNX6-204ENST00000555541 FLT3LGP49771 235 aa5.31□□□□□ -1.56
SNX6-204ENST00000555541 CHN2P52757 468 aa5.31□□□□□ -1.56
SNX6-204ENST00000555541 ELLP55199 621 aaPredicted RBP5.31□□□□□ -1.56
SNX6-204ENST00000555541 BLOC1S1P78537 153 aa5.31□□□□□ -1.56
SNX6-204ENST00000555541 MAPK7Q13164 816 aa5.31□□□□□ -1.56
SNX6-204ENST00000555541 FAM47AQ5JRC9 791 aa5.31□□□□□ -1.56
SNX6-204ENST00000555541 NELL1Q92832 810 aa5.31□□□□□ -1.56
SNX6-204ENST00000555541 KRTAP2-2Q9BYT5 123 aa5.31□□□□□ -1.56
SNX6-204ENST00000555541 KCTD10Q9H3F6 313 aa5.31□□□□□ -1.56
SNX6-204ENST00000555541 EMC7Q9NPA0 242 aa5.31□□□□□ -1.56
SNX6-204ENST00000555541 KLHL11Q9NVR0 708 aa5.31□□□□□ -1.56
SNX6-204ENST00000555541 DNAJC9-AS1A6NH13 148 aa5.3□□□□□ -1.56
SNX6-204ENST00000555541 CXorf49A8MYA2 514 aaPredicted RBP5.3□□□□□ -1.56
SNX6-204ENST00000555541 PJA2O43164 708 aa5.3□□□□□ -1.56
SNX6-204ENST00000555541 KDM1AO60341 852 aa5.3□□□□□ -1.56
SNX6-204ENST00000555541 C1QL1O75973 258 aa5.3□□□□□ -1.56
SNX6-204ENST00000555541 CXCR5P32302 372 aa5.3□□□□□ -1.56
SNX6-204ENST00000555541 CRHR1P34998 444 aa5.3□□□□□ -1.56
SNX6-204ENST00000555541 SCNN1BP51168 640 aa5.3□□□□□ -1.56
SNX6-204ENST00000555541 LGALS4P56470 323 aa5.3□□□□□ -1.56
SNX6-204ENST00000555541 CT83Q5H943 113 aa5.3□□□□□ -1.56
SNX6-204ENST00000555541 C16orf86Q6ZW13 317 aa5.3□□□□□ -1.56
SNX6-204ENST00000555541 HDGFL2Q7Z4V5 671 aaPredicted RBP5.3□□□□□ -1.56
SNX6-204ENST00000555541 RASSF3Q86WH2 238 aa5.3□□□□□ -1.56
SNX6-204ENST00000555541 RHOT2Q8IXI1 618 aa5.3□□□□□ -1.56
SNX6-204ENST00000555541 DHX37Q8IY37 1157 aaKnown RBP5.3□□□□□ -1.56
SNX6-204ENST00000555541 NIM1KQ8IY84 436 aa5.3□□□□□ -1.56
SNX6-204ENST00000555541 TMEM132CQ8N3T6 1108 aa5.3□□□□□ -1.56
SNX6-204ENST00000555541 REPS2Q8NFH8 660 aa5.3□□□□□ -1.56
SNX6-204ENST00000555541 C1QTNF7Q9BXJ2 289 aa5.3□□□□□ -1.56
SNX6-204ENST00000555541 MATN4O95460 622 aa5.29□□□□□ -1.56
SNX6-204ENST00000555541 C1RP00736 705 aa5.29□□□□□ -1.56
SNX6-204ENST00000555541 SPATA31D3P0C874 917 aa5.29□□□□□ -1.56
SNX6-204ENST00000555541 CANXP27824 592 aaKnown RBP5.29□□□□□ -1.56
SNX6-204ENST00000555541 OCRLQ01968 901 aa5.29□□□□□ -1.56
SNX6-204ENST00000555541 MPP3Q13368 585 aa5.29□□□□□ -1.56
SNX6-204ENST00000555541 DALRD3Q5D0E6 543 aaKnown RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms