RNA–Protein interactions for RNA: ENST00000555052.1

ARHGEF40-205, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 3

Gene ARHGEF40, Length 935 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-205ENST00000555052 CCDC113Q9H0I3 377 aa17.35■□□□□ 0.37
ARHGEF40-205ENST00000555052 PLEKHA4Q9H4M7 779 aa17.35■□□□□ 0.37
ARHGEF40-205ENST00000555052 IGSF9Q9P2J2 1179 aa17.35■□□□□ 0.37
ARHGEF40-205ENST00000555052 EPS15L1Q9UBC2 864 aa17.35■□□□□ 0.37
ARHGEF40-205ENST00000555052 CACNG4Q9UBN1 327 aa17.35■□□□□ 0.37
ARHGEF40-205ENST00000555052 PARP2Q9UGN5 583 aa17.35■□□□□ 0.37
ARHGEF40-205ENST00000555052 PROB1E7EW31 1015 aa17.34■□□□□ 0.37
ARHGEF40-205ENST00000555052 PTGESO14684 152 aa17.34■□□□□ 0.37
ARHGEF40-205ENST00000555052 SEC24BO95487 1268 aa17.34■□□□□ 0.37
ARHGEF40-205ENST00000555052 EDN1P05305 212 aa17.34■□□□□ 0.37
ARHGEF40-205ENST00000555052 OR52Z1P0C646 297 aa17.34■□□□□ 0.37
ARHGEF40-205ENST00000555052 NPR3P17342 541 aa17.34■□□□□ 0.37
ARHGEF40-205ENST00000555052 CYP11B2P19099 503 aa17.34■□□□□ 0.37
ARHGEF40-205ENST00000555052 TUSC3Q13454 348 aa17.34■□□□□ 0.37
ARHGEF40-205ENST00000555052 HSP90AA2PQ14568 343 aaPredicted RBP17.34■□□□□ 0.37
ARHGEF40-205ENST00000555052 SAFBQ15424 915 aaKnown RBP eCLIP17.34■□□□□ 0.37
ARHGEF40-205ENST00000555052 PADI6Q6TGC4 694 aa17.34■□□□□ 0.37
ARHGEF40-205ENST00000555052 RIN2Q8WYP3 895 aaPredicted RBP17.34■□□□□ 0.37
ARHGEF40-205ENST00000555052 SMG7Q92540 1137 aaKnown RBP17.34■□□□□ 0.37
ARHGEF40-205ENST00000555052 RABGGTAQ92696 567 aa17.34■□□□□ 0.37
ARHGEF40-205ENST00000555052 STAMQ92783 540 aa17.34■□□□□ 0.37
ARHGEF40-205ENST00000555052 MYADMQ96S97 322 aa17.34■□□□□ 0.37
ARHGEF40-205ENST00000555052 C2orf40Q9H1Z8 148 aa17.34■□□□□ 0.37
ARHGEF40-205ENST00000555052 MFSD1Q9H3U5 465 aa17.34■□□□□ 0.37
ARHGEF40-205ENST00000555052 ZDHHC7Q9NXF8 308 aa17.34■□□□□ 0.37
ARHGEF40-205ENST00000555052 VWA8A3KMH1 1905 aa17.33■□□□□ 0.37
ARHGEF40-205ENST00000555052 SF3B1O75533 1304 aaKnown RBP eCLIP17.33■□□□□ 0.36
ARHGEF40-205ENST00000555052 N4BP3O15049 544 aa17.33■□□□□ 0.36
ARHGEF40-205ENST00000555052 ST18O60284 1047 aa17.33■□□□□ 0.36
ARHGEF40-205ENST00000555052 EIF5BO60841 1220 aaKnown RBP17.33■□□□□ 0.36
ARHGEF40-205ENST00000555052 SPATA31D3P0C874 917 aa17.33■□□□□ 0.36
ARHGEF40-205ENST00000555052 MYBP10242 640 aa17.33■□□□□ 0.36
ARHGEF40-205ENST00000555052 RPL17P18621 184 aaKnown RBP17.33■□□□□ 0.36
ARHGEF40-205ENST00000555052 CREMQ03060 361 aa17.33■□□□□ 0.36
ARHGEF40-205ENST00000555052 NAB2Q15742 525 aa17.33■□□□□ 0.36
ARHGEF40-205ENST00000555052 RTP2Q5QGT7 225 aa17.33■□□□□ 0.36
ARHGEF40-205ENST00000555052 SPATA31D4Q6ZUB0 917 aa17.33■□□□□ 0.36
ARHGEF40-205ENST00000555052 PALB2Q86YC2 1186 aa17.33■□□□□ 0.36
ARHGEF40-205ENST00000555052 C8orf76Q96K31 380 aa17.33■□□□□ 0.36
ARHGEF40-205ENST00000555052 LLPHQ9BRT6 129 aaKnown RBP17.33■□□□□ 0.36
ARHGEF40-205ENST00000555052 NT5C3AQ9H0P0 336 aa17.33■□□□□ 0.36
ARHGEF40-205ENST00000555052 CXCL16Q9H2A7 254 aa17.33■□□□□ 0.36
ARHGEF40-205ENST00000555052 FOXP1Q9H334 677 aaPredicted RBP17.33■□□□□ 0.36
ARHGEF40-205ENST00000555052 LIMCH1Q9UPQ0 1083 aa17.33■□□□□ 0.36
ARHGEF40-205ENST00000555052 CEP250Q9BV73 2442 aa17.33■□□□□ 0.36
ARHGEF40-205ENST00000555052 GPR179Q6PRD1 2367 aa17.33■□□□□ 0.36
ARHGEF40-205ENST00000555052 OTOGLQ3ZCN5 2332 aa17.33■□□□□ 0.36
ARHGEF40-205ENST00000555052 TRIP11Q15643 1979 aa17.32■□□□□ 0.36
ARHGEF40-205ENST00000555052 ACKR2O00590 384 aa17.32■□□□□ 0.36
ARHGEF40-205ENST00000555052 NARSO43776 548 aaKnown RBP17.32■□□□□ 0.36
ARHGEF40-205ENST00000555052 GFRA3O60609 400 aa17.32■□□□□ 0.36
ARHGEF40-205ENST00000555052 RECQL4O94761 1208 aa17.32■□□□□ 0.36
ARHGEF40-205ENST00000555052 KIF4AO95239 1232 aa17.32■□□□□ 0.36
ARHGEF40-205ENST00000555052 PRKCBP05771 671 aa17.32■□□□□ 0.36
ARHGEF40-205ENST00000555052 AOC1P19801 751 aa17.32■□□□□ 0.36
ARHGEF40-205ENST00000555052 MUTP22033 750 aa17.32■□□□□ 0.36
ARHGEF40-205ENST00000555052 NAMPTP43490 491 aa17.32■□□□□ 0.36
ARHGEF40-205ENST00000555052 PRPF4BQ13523 1007 aaKnown RBP17.32■□□□□ 0.36
ARHGEF40-205ENST00000555052 ZNF174Q15697 407 aa17.32■□□□□ 0.36
ARHGEF40-205ENST00000555052 MAPK6Q16659 721 aa17.32■□□□□ 0.36
ARHGEF40-205ENST00000555052 ERICH6BQ5W0A0 696 aa17.32■□□□□ 0.36
ARHGEF40-205ENST00000555052 CCDC83Q8IWF9 413 aa17.32■□□□□ 0.36
ARHGEF40-205ENST00000555052 FBXO18Q8NFZ0 1043 aa17.32■□□□□ 0.36
ARHGEF40-205ENST00000555052 ERMNQ8TAM6 284 aa17.32■□□□□ 0.36
ARHGEF40-205ENST00000555052 PRKD2Q9BZL6 878 aa17.32■□□□□ 0.36
ARHGEF40-205ENST00000555052 SNTG2Q9NY99 539 aa17.32■□□□□ 0.36
ARHGEF40-205ENST00000555052 USP20Q9Y2K6 914 aa17.32■□□□□ 0.36
ARHGEF40-205ENST00000555052 ARHGEF35A5YM69 484 aa17.31■□□□□ 0.36
ARHGEF40-205ENST00000555052 CASTOR2A6NHX0 329 aa17.31■□□□□ 0.36
ARHGEF40-205ENST00000555052 TADA2AO75478 443 aa17.31■□□□□ 0.36
ARHGEF40-205ENST00000555052 GBP2P32456 591 aaPredicted RBP17.31■□□□□ 0.36
ARHGEF40-205ENST00000555052 NBL1P41271 181 aa17.31■□□□□ 0.36
ARHGEF40-205ENST00000555052 ECM1Q16610 540 aa17.31■□□□□ 0.36
ARHGEF40-205ENST00000555052 TTC38Q5R3I4 469 aa17.31■□□□□ 0.36
ARHGEF40-205ENST00000555052 EEF1DP3Q658K8 133 aa17.31■□□□□ 0.36
ARHGEF40-205ENST00000555052 PRSS55Q6UWB4 352 aaPredicted RBP17.31■□□□□ 0.36
ARHGEF40-205ENST00000555052 NOSTRINQ8IVI9 506 aa17.31■□□□□ 0.36
ARHGEF40-205ENST00000555052 GLYCTKQ8IVS8 523 aa17.31■□□□□ 0.36
ARHGEF40-205ENST00000555052 C4orf32Q8N8J7 132 aa17.31■□□□□ 0.36
ARHGEF40-205ENST00000555052 FLCNQ8NFG4 579 aa17.31■□□□□ 0.36
ARHGEF40-205ENST00000555052 HASPINQ8TF76 798 aa17.31■□□□□ 0.36
ARHGEF40-205ENST00000555052 RSAD2Q8WXG1 361 aa17.31■□□□□ 0.36
ARHGEF40-205ENST00000555052 PIK3R5Q8WYR1 880 aa17.31■□□□□ 0.36
ARHGEF40-205ENST00000555052 TTPALQ9BTX7 342 aa17.31■□□□□ 0.36
ARHGEF40-205ENST00000555052 FBXW11Q9UKB1 542 aa17.31■□□□□ 0.36
ARHGEF40-205ENST00000555052 PI15O43692 258 aa17.3■□□□□ 0.36
ARHGEF40-205ENST00000555052 ZMYND10O75800 440 aa17.3■□□□□ 0.36
ARHGEF40-205ENST00000555052 THP07101 528 aa17.3■□□□□ 0.36
ARHGEF40-205ENST00000555052 TRAPPC10P48553 1259 aa17.3■□□□□ 0.36
ARHGEF40-205ENST00000555052 FXR2P51116 673 aaKnown RBP eCLIP17.3■□□□□ 0.364e-8■■□□□ 13.2
ARHGEF40-205ENST00000555052 PPP2R5AQ15172 486 aa17.3■□□□□ 0.36
ARHGEF40-205ENST00000555052 HAUS3Q68CZ6 603 aa17.3■□□□□ 0.36
ARHGEF40-205ENST00000555052 SIX5Q8N196 739 aa17.3■□□□□ 0.36
ARHGEF40-205ENST00000555052 DEPTORQ8TB45 409 aa17.3■□□□□ 0.36
ARHGEF40-205ENST00000555052 LNX1Q8TBB1 728 aaPredicted RBP17.3■□□□□ 0.36
ARHGEF40-205ENST00000555052 NXPE3Q969Y0 559 aa17.3■□□□□ 0.36
ARHGEF40-205ENST00000555052 CLSTN3Q9BQT9 956 aa17.3■□□□□ 0.36
ARHGEF40-205ENST00000555052 KIFC3Q9BVG8 833 aa17.3■□□□□ 0.36
ARHGEF40-205ENST00000555052 FBXL21Q9UKT6 434 aa17.3■□□□□ 0.36
ARHGEF40-205ENST00000555052 CACNA1IQ9P0X4 2223 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms