RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 CCDC155Q8N6L0 562 aa18.89■□□□□ 0.61
SHOX-204ENST00000554971 ATRIPQ8WXE1 791 aa18.89■□□□□ 0.61
SHOX-204ENST00000554971 DNAJC19Q96DA6 116 aa18.89■□□□□ 0.61
SHOX-204ENST00000554971 OSMRQ99650 979 aa18.89■□□□□ 0.61
SHOX-204ENST00000554971 CELF4Q9BZC1 486 aaKnown RBP18.89■□□□□ 0.61
SHOX-204ENST00000554971 PRKAG2Q9UGJ0 569 aa18.89■□□□□ 0.61
SHOX-204ENST00000554971 GINS2Q9Y248 185 aa18.89■□□□□ 0.61
SHOX-204ENST00000554971 SIK3Q9Y2K2 1263 aa18.89■□□□□ 0.61
SHOX-204ENST00000554971 SFI1A8K8P3 1242 aa18.88■□□□□ 0.61
SHOX-204ENST00000554971 CSF2RAP15509 400 aa18.88■□□□□ 0.61
SHOX-204ENST00000554971 MCM3P25205 808 aa18.88■□□□□ 0.61
SHOX-204ENST00000554971 CAPSQ13938 189 aa18.88■□□□□ 0.61
SHOX-204ENST00000554971 GIT2Q14161 759 aa18.88■□□□□ 0.61
SHOX-204ENST00000554971 SPA17Q15506 151 aa18.88■□□□□ 0.61
SHOX-204ENST00000554971 TCP11Q8WWU5 503 aa18.88■□□□□ 0.61
SHOX-204ENST00000554971 JAKMIP2Q96AA8 810 aa18.88■□□□□ 0.61
SHOX-204ENST00000554971 CCDC42Q96M95 316 aa18.88■□□□□ 0.61
SHOX-204ENST00000554971 GUCA1BQ9UMX6 200 aa18.88■□□□□ 0.61
SHOX-204ENST00000554971 NR2E3Q9Y5X4 410 aa18.88■□□□□ 0.61
SHOX-204ENST00000554971 MICAL3Q7RTP6 2002 aa18.88■□□□□ 0.61
SHOX-204ENST00000554971 ADGRA3Q8IWK6 1321 aa18.88■□□□□ 0.61
SHOX-204ENST00000554971 A0A087WZ62 844 aa18.88■□□□□ 0.61
SHOX-204ENST00000554971 H0YGN5 161 aa18.88■□□□□ 0.61
SHOX-204ENST00000554971 CSDE1O75534 798 aaKnown RBP18.88■□□□□ 0.61
SHOX-204ENST00000554971 LCA5LO95447 670 aa18.88■□□□□ 0.61
SHOX-204ENST00000554971 RPLP2P05387 115 aaKnown RBP18.88■□□□□ 0.61
SHOX-204ENST00000554971 IDEP14735 1019 aa18.88■□□□□ 0.61
SHOX-204ENST00000554971 PLA2G4AP47712 749 aa18.88■□□□□ 0.61
SHOX-204ENST00000554971 CKAP4Q07065 602 aaKnown RBP18.88■□□□□ 0.61
SHOX-204ENST00000554971 LRRC55Q6ZSA7 311 aa18.88■□□□□ 0.61
SHOX-204ENST00000554971 DYMQ7RTS9 669 aa18.88■□□□□ 0.61
SHOX-204ENST00000554971 NLRP4Q96MN2 994 aa18.88■□□□□ 0.61
SHOX-204ENST00000554971 FDXACB1Q9BRP7 624 aaPredicted RBP18.88■□□□□ 0.61
SHOX-204ENST00000554971 TRPV2Q9Y5S1 764 aa18.88■□□□□ 0.61
SHOX-204ENST00000554971 VAV2P52735 878 aa18.87■□□□□ 0.61
SHOX-204ENST00000554971 MARSP56192 900 aaKnown RBP18.87■□□□□ 0.61
SHOX-204ENST00000554971 KIF5AQ12840 1032 aa18.87■□□□□ 0.61
SHOX-204ENST00000554971 COASYQ13057 564 aa18.87■□□□□ 0.61
SHOX-204ENST00000554971 LPIN1Q14693 890 aa18.87■□□□□ 0.61
SHOX-204ENST00000554971 ZCWPW2Q504Y3 356 aa18.87■□□□□ 0.61
SHOX-204ENST00000554971 FBXO47Q5MNV8 452 aa18.87■□□□□ 0.61
SHOX-204ENST00000554971 PPP4R3CPQ6ZMV5 832 aa18.87■□□□□ 0.61
SHOX-204ENST00000554971 SYN2Q92777 582 aaPredicted RBP18.87■□□□□ 0.61
SHOX-204ENST00000554971 MINDY3Q9H8M7 445 aa18.87■□□□□ 0.61
SHOX-204ENST00000554971 ANKZF1Q9H8Y5 726 aa18.87■□□□□ 0.61
SHOX-204ENST00000554971 AGO3Q9H9G7 860 aaKnown RBP18.87■□□□□ 0.61
SHOX-204ENST00000554971 PANK4Q9NVE7 773 aa18.87■□□□□ 0.61
SHOX-204ENST00000554971 SAR1BQ9Y6B6 198 aa18.87■□□□□ 0.61
SHOX-204ENST00000554971 SRGAP2CP0DJJ0 459 aa18.86■□□□□ 0.61
SHOX-204ENST00000554971 GHRP10912 638 aa18.86■□□□□ 0.61
SHOX-204ENST00000554971 ZNF131P52739 623 aa18.86■□□□□ 0.61
SHOX-204ENST00000554971 EPHB4P54760 987 aa18.86■□□□□ 0.61
SHOX-204ENST00000554971 MXD4Q14582 209 aaPredicted RBP18.86■□□□□ 0.61
SHOX-204ENST00000554971 TCTN1Q2MV58 587 aa18.86■□□□□ 0.61
SHOX-204ENST00000554971 FAM26FQ5R3K3 315 aa18.86■□□□□ 0.61
SHOX-204ENST00000554971 C16orf59Q7L2K0 433 aa18.86■□□□□ 0.61
SHOX-204ENST00000554971 RNF149Q8NC42 400 aa18.86■□□□□ 0.61
SHOX-204ENST00000554971 KIFAP3Q92845 792 aa18.86■□□□□ 0.61
SHOX-204ENST00000554971 KIFC3Q9BVG8 833 aa18.86■□□□□ 0.61
SHOX-204ENST00000554971 PUF60Q9UHX1 559 aaKnown RBP18.86■□□□□ 0.61
SHOX-204ENST00000554971 PRDM4Q9UKN5 801 aa18.86■□□□□ 0.61
SHOX-204ENST00000554971 CXCL10P02778 98 aa18.86■□□□□ 0.61
SHOX-204ENST00000554971 CRYBB1P53674 252 aaPredicted RBP18.86■□□□□ 0.61
SHOX-204ENST00000554971 WDR93Q6P2C0 686 aa18.86■□□□□ 0.61
SHOX-204ENST00000554971 NLRP7Q8WX94 980 aa18.86■□□□□ 0.61
SHOX-204ENST00000554971 FUT8Q9BYC5 575 aa18.86■□□□□ 0.61
SHOX-204ENST00000554971 MAP2K7O14733 419 aa18.85■□□□□ 0.61
SHOX-204ENST00000554971 ABL1P00519 1130 aa18.85■□□□□ 0.61
SHOX-204ENST00000554971 PRLRP16471 622 aa18.85■□□□□ 0.61
SHOX-204ENST00000554971 GPS2Q13227 327 aa18.85■□□□□ 0.61
SHOX-204ENST00000554971 LONRF2Q1L5Z9 754 aa18.85■□□□□ 0.61
SHOX-204ENST00000554971 DEFB128Q7Z7B8 93 aa18.85■□□□□ 0.61
SHOX-204ENST00000554971 ZNF410Q86VK4 478 aa18.85■□□□□ 0.61
SHOX-204ENST00000554971 FIZ1Q96SL8 496 aa18.85■□□□□ 0.61
SHOX-204ENST00000554971 TIPINQ9BVW5 301 aa18.85■□□□□ 0.61
SHOX-204ENST00000554971 ODF2LQ9ULJ1 636 aa18.85■□□□□ 0.61
SHOX-204ENST00000554971 NOC2LQ9Y3T9 749 aaKnown RBP18.85■□□□□ 0.61
SHOX-204ENST00000554971 PTPRSQ13332 1948 aa18.85■□□□□ 0.61
SHOX-204ENST00000554971 SSU72P8A0A1W2PR75 194 aa18.84■□□□□ 0.61
SHOX-204ENST00000554971 FRMD3A2A2Y4 597 aa18.84■□□□□ 0.61
SHOX-204ENST00000554971 ASAP2O43150 1006 aa18.84■□□□□ 0.61
SHOX-204ENST00000554971 DARSP14868 501 aaKnown RBP18.84■□□□□ 0.61
SHOX-204ENST00000554971 EIF4BP23588 611 aaKnown RBP18.84■□□□□ 0.61
SHOX-204ENST00000554971 MAGEA10P43363 369 aaPredicted RBP18.84■□□□□ 0.61
SHOX-204ENST00000554971 PTENP60484 403 aa18.84■□□□□ 0.61
SHOX-204ENST00000554971 EDRF1Q3B7T1 1238 aa18.84■□□□□ 0.61
SHOX-204ENST00000554971 IQCEQ6IPM2 695 aa18.84■□□□□ 0.61
SHOX-204ENST00000554971 HDXQ7Z353 690 aa18.84■□□□□ 0.61
SHOX-204ENST00000554971 ZC3H3Q8IXZ2 948 aaKnown RBP18.84■□□□□ 0.61
SHOX-204ENST00000554971 TRIM58Q8NG06 486 aa18.84■□□□□ 0.61
SHOX-204ENST00000554971 DRC1Q96MC2 740 aa18.84■□□□□ 0.61
SHOX-204ENST00000554971 M0QZ92 97 aa18.84■□□□□ 0.61
SHOX-204ENST00000554971 ACRP10323 421 aa18.84■□□□□ 0.61
SHOX-204ENST00000554971 FGFR4P22455 802 aa18.84■□□□□ 0.61
SHOX-204ENST00000554971 NPTX2P47972 431 aa18.84■□□□□ 0.61
SHOX-204ENST00000554971 PEX3P56589 373 aa18.84■□□□□ 0.61
SHOX-204ENST00000554971 MAPK8IP2Q13387 824 aaPredicted RBP18.84■□□□□ 0.61
SHOX-204ENST00000554971 CDCA2Q69YH5 1023 aaPredicted RBP18.84■□□□□ 0.61
SHOX-204ENST00000554971 FAM228AQ86W67 206 aa18.84■□□□□ 0.61
SHOX-204ENST00000554971 TMEM199Q8N511 208 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms