RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 CPSF3Q9UKF6 684 aaKnown RBP17.92■□□□□ 0.46
SPTLC2-203ENST00000554901 LRFN2Q9ULH4 789 aa17.92■□□□□ 0.46
SPTLC2-203ENST00000554901 SLC4A7Q9Y6M7 1214 aa17.92■□□□□ 0.46
SPTLC2-203ENST00000554901 TNRC18O15417 2968 aaPredicted RBP17.91■□□□□ 0.46
SPTLC2-203ENST00000554901 ZBBXA8MT70 800 aa17.91■□□□□ 0.46
SPTLC2-203ENST00000554901 EXOC3O60645 756 aa17.91■□□□□ 0.46
SPTLC2-203ENST00000554901 HARSP12081 509 aaKnown RBP17.91■□□□□ 0.46
SPTLC2-203ENST00000554901 CYP2J2P51589 502 aa17.91■□□□□ 0.46
SPTLC2-203ENST00000554901 PMS1P54277 932 aaKnown RBP17.91■□□□□ 0.46
SPTLC2-203ENST00000554901 YARSP54577 528 aaKnown RBP17.91■□□□□ 0.46
SPTLC2-203ENST00000554901 CD302Q8IX05 232 aa17.91■□□□□ 0.46
SPTLC2-203ENST00000554901 ENOX1Q8TC92 643 aaKnown RBP17.91■□□□□ 0.46
SPTLC2-203ENST00000554901 TSPAN18Q96SJ8 248 aa17.91■□□□□ 0.46
SPTLC2-203ENST00000554901 BPIFA3Q9BQP9 254 aa17.91■□□□□ 0.46
SPTLC2-203ENST00000554901 PCIF1Q9H4Z3 704 aa17.91■□□□□ 0.46
SPTLC2-203ENST00000554901 PCDH10Q9P2E7 1040 aa17.91■□□□□ 0.46
SPTLC2-203ENST00000554901 FRMD4BQ9Y2L6 1034 aa17.91■□□□□ 0.46
SPTLC2-203ENST00000554901 TRIM49BA6NDI0 452 aa17.9■□□□□ 0.46
SPTLC2-203ENST00000554901 ZNF233A6NK53 670 aa17.9■□□□□ 0.46
SPTLC2-203ENST00000554901 INPPL1O15357 1258 aa17.9■□□□□ 0.46
SPTLC2-203ENST00000554901 ADRB2P07550 413 aa17.9■□□□□ 0.46
SPTLC2-203ENST00000554901 ZNF445P59923 1031 aa17.9■□□□□ 0.46
SPTLC2-203ENST00000554901 CRELD2Q6UXH1 353 aaPredicted RBP17.9■□□□□ 0.46
SPTLC2-203ENST00000554901 AGMOQ6ZNB7 445 aa17.9■□□□□ 0.46
SPTLC2-203ENST00000554901 CSGALNACT2Q8N6G5 542 aa17.9■□□□□ 0.46
SPTLC2-203ENST00000554901 CEP120Q8N960 986 aa17.9■□□□□ 0.46
SPTLC2-203ENST00000554901 DUSP9Q99956 384 aaKnown RBP17.9■□□□□ 0.46
SPTLC2-203ENST00000554901 FAM213AQ9BRX8 229 aa17.9■□□□□ 0.46
SPTLC2-203ENST00000554901 DNAJC25Q9H1X3 360 aa17.9■□□□□ 0.46
SPTLC2-203ENST00000554901 RSAD1Q9HA92 442 aa17.9■□□□□ 0.46
SPTLC2-203ENST00000554901 SNTG2Q9NY99 539 aa17.9■□□□□ 0.46
SPTLC2-203ENST00000554901 HES2Q9Y543 173 aa17.9■□□□□ 0.46
SPTLC2-203ENST00000554901 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.9■□□□□ 0.46
SPTLC2-203ENST00000554901 SLC16A3O15427 465 aaKnown RBP17.89■□□□□ 0.45
SPTLC2-203ENST00000554901 RECQL4O94761 1208 aa17.89■□□□□ 0.45
SPTLC2-203ENST00000554901 ACOT2P49753 483 aa17.89■□□□□ 0.45
SPTLC2-203ENST00000554901 DEFB103AP81534 67 aa17.89■□□□□ 0.45
SPTLC2-203ENST00000554901 ENPEPQ07075 957 aa17.89■□□□□ 0.45
SPTLC2-203ENST00000554901 SURF1Q15526 300 aa17.89■□□□□ 0.45
SPTLC2-203ENST00000554901 SNRNP35Q16560 246 aaKnown RBP17.89■□□□□ 0.45
SPTLC2-203ENST00000554901 ANO6Q4KMQ2 910 aa17.89■□□□□ 0.45
SPTLC2-203ENST00000554901 LRSAM1Q6UWE0 723 aa17.89■□□□□ 0.45
SPTLC2-203ENST00000554901 GLB1LQ6UWU2 654 aa17.89■□□□□ 0.45
SPTLC2-203ENST00000554901 LRRC55Q6ZSA7 311 aa17.89■□□□□ 0.45
SPTLC2-203ENST00000554901 C11orf57Q6ZUT1 292 aaPredicted RBP17.89■□□□□ 0.45
SPTLC2-203ENST00000554901 BRSK2Q8IWQ3 736 aa17.89■□□□□ 0.45
SPTLC2-203ENST00000554901 NOC3LQ8WTT2 800 aaKnown RBP17.89■□□□□ 0.45
SPTLC2-203ENST00000554901 SAAL1Q96ER3 474 aa17.89■□□□□ 0.45
SPTLC2-203ENST00000554901 RNPC3Q96LT9 517 aaKnown RBP17.89■□□□□ 0.45
SPTLC2-203ENST00000554901 RNF39Q9H2S5 420 aa17.89■□□□□ 0.45
SPTLC2-203ENST00000554901 ASB7Q9H672 318 aa17.89■□□□□ 0.45
SPTLC2-203ENST00000554901 RPF1Q9H9Y2 349 aaKnown RBP17.89■□□□□ 0.45
SPTLC2-203ENST00000554901 CXXC1Q9P0U4 656 aaPredicted RBP17.89■□□□□ 0.45
SPTLC2-203ENST00000554901 IL18RAPO95256 599 aa17.88■□□□□ 0.45
SPTLC2-203ENST00000554901 GNA14O95837 355 aa17.88■□□□□ 0.45
SPTLC2-203ENST00000554901 PSMC2P35998 433 aaKnown RBP17.88■□□□□ 0.45
SPTLC2-203ENST00000554901 STX17P56962 302 aa17.88■□□□□ 0.45
SPTLC2-203ENST00000554901 OSTNP61366 133 aa17.88■□□□□ 0.45
SPTLC2-203ENST00000554901 SHHQ15465 462 aa17.88■□□□□ 0.45
SPTLC2-203ENST00000554901 ENOX2Q16206 610 aaKnown RBP17.88■□□□□ 0.45
SPTLC2-203ENST00000554901 XKR4Q5GH76 650 aa17.88■□□□□ 0.45
SPTLC2-203ENST00000554901 C9orf50Q5SZB4 431 aa17.88■□□□□ 0.45
SPTLC2-203ENST00000554901 SPATA1Q5VX52 437 aa17.88■□□□□ 0.45
SPTLC2-203ENST00000554901 FILIP1Q7Z7B0 1213 aa17.88■□□□□ 0.45
SPTLC2-203ENST00000554901 ABI1Q8IZP0 508 aa17.88■□□□□ 0.45
SPTLC2-203ENST00000554901 RNF169Q8NCN4 708 aa17.88■□□□□ 0.45
SPTLC2-203ENST00000554901 MED15Q96RN5 788 aa17.88■□□□□ 0.45
SPTLC2-203ENST00000554901 GZF1Q9H116 711 aaPredicted RBP17.88■□□□□ 0.45
SPTLC2-203ENST00000554901 KANSL3Q9P2N6 904 aa17.88■□□□□ 0.45
SPTLC2-203ENST00000554901 PARP2Q9UGN5 583 aa17.88■□□□□ 0.45
SPTLC2-203ENST00000554901 TTC26A0AVF1 554 aa17.88■□□□□ 0.45
SPTLC2-203ENST00000554901 IKBKBO14920 756 aa17.88■□□□□ 0.45
SPTLC2-203ENST00000554901 DGKIO75912 1065 aa17.88■□□□□ 0.45
SPTLC2-203ENST00000554901 GJB5O95377 273 aa17.88■□□□□ 0.45
SPTLC2-203ENST00000554901 ATP2A2P16615 1042 aaKnown RBP17.88■□□□□ 0.45
SPTLC2-203ENST00000554901 AKAP5P24588 427 aa17.88■□□□□ 0.45
SPTLC2-203ENST00000554901 TNFSF9P41273 254 aa17.88■□□□□ 0.45
SPTLC2-203ENST00000554901 ZNF165P49910 485 aa17.88■□□□□ 0.45
SPTLC2-203ENST00000554901 MYL5Q02045 173 aa17.88■□□□□ 0.45
SPTLC2-203ENST00000554901 PPP2R3AQ06190 1150 aa17.88■□□□□ 0.45
SPTLC2-203ENST00000554901 TPD52L1Q16890 204 aaPredicted RBP17.88■□□□□ 0.45
SPTLC2-203ENST00000554901 SLC10A6Q3KNW5 377 aa17.88■□□□□ 0.45
SPTLC2-203ENST00000554901 ZBTB41Q5SVQ8 909 aa17.88■□□□□ 0.45
SPTLC2-203ENST00000554901 CEP135Q66GS9 1140 aa17.88■□□□□ 0.45
SPTLC2-203ENST00000554901 ALKAL1Q6UXT8 129 aa17.88■□□□□ 0.45
SPTLC2-203ENST00000554901 USP37Q86T82 979 aa17.88■□□□□ 0.45
SPTLC2-203ENST00000554901 LPPQ93052 612 aa17.88■□□□□ 0.45
SPTLC2-203ENST00000554901 SNX27Q96L92 541 aa17.88■□□□□ 0.45
SPTLC2-203ENST00000554901 APOL6Q9BWW8 343 aa17.88■□□□□ 0.45
SPTLC2-203ENST00000554901 MRPL9Q9BYD2 267 aaKnown RBP17.88■□□□□ 0.45
SPTLC2-203ENST00000554901 TMEM117Q9H0C3 514 aa17.88■□□□□ 0.45
SPTLC2-203ENST00000554901 PRO3102Q9H379 93 aa17.88■□□□□ 0.45
SPTLC2-203ENST00000554901 RBAKQ9NYW8 714 aaPredicted RBP17.88■□□□□ 0.45
SPTLC2-203ENST00000554901 CNTN3Q9P232 1028 aa17.88■□□□□ 0.45
SPTLC2-203ENST00000554901 GOLGA8IPA6NC78 632 aa17.87■□□□□ 0.45
SPTLC2-203ENST00000554901 GOLGA8JA6NMD2 632 aa17.87■□□□□ 0.45
SPTLC2-203ENST00000554901 OFD1O75665 1012 aa17.87■□□□□ 0.45
SPTLC2-203ENST00000554901 AKAP3O75969 853 aa17.87■□□□□ 0.45
SPTLC2-203ENST00000554901 CXCL8P10145 99 aa17.87■□□□□ 0.45
SPTLC2-203ENST00000554901 EPB41P11171 864 aaKnown RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms