RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 HOXB13Q92826 284 aaPredicted RBP5.33□□□□□ -1.56
SCFD1-214ENST00000554819 TEKT5Q96M29 485 aa5.33□□□□□ -1.56
SCFD1-214ENST00000554819 ZNF703Q9H7S9 590 aaPredicted RBP5.33□□□□□ -1.56
SCFD1-214ENST00000554819 PARPBPQ9NWS1 579 aa5.33□□□□□ -1.56
SCFD1-214ENST00000554819 PJA2O43164 708 aa5.32□□□□□ -1.56
SCFD1-214ENST00000554819 TEX33O43247 280 aa5.32□□□□□ -1.56
SCFD1-214ENST00000554819 ADCY6O43306 1168 aa5.32□□□□□ -1.56
SCFD1-214ENST00000554819 PDGFRBP09619 1106 aa5.32□□□□□ -1.56
SCFD1-214ENST00000554819 SNRPA1P09661 255 aaKnown RBP5.32□□□□□ -1.56
SCFD1-214ENST00000554819 ADKP55263 362 aaKnown RBP5.32□□□□□ -1.56
SCFD1-214ENST00000554819 KRTAP10-2P60368 255 aa5.32□□□□□ -1.56
SCFD1-214ENST00000554819 PUM1Q14671 1186 aaKnown RBP eCLIP5.32□□□□□ -1.56
SCFD1-214ENST00000554819 VPS72Q15906 364 aa5.32□□□□□ -1.56
SCFD1-214ENST00000554819 BMT2Q1RMZ1 405 aa5.32□□□□□ -1.56
SCFD1-214ENST00000554819 EFCAB12Q6NXP0 572 aa5.32□□□□□ -1.56
SCFD1-214ENST00000554819 DRICH1Q6PGQ1 229 aaPredicted RBP5.32□□□□□ -1.56
SCFD1-214ENST00000554819 GPRIN1Q7Z2K8 1008 aa5.32□□□□□ -1.56
SCFD1-214ENST00000554819 XYLT1Q86Y38 959 aa5.32□□□□□ -1.56
SCFD1-214ENST00000554819 REPS2Q8NFH8 660 aa5.32□□□□□ -1.56
SCFD1-214ENST00000554819 OR52N2Q8NGI0 321 aa5.32□□□□□ -1.56
SCFD1-214ENST00000554819 ZFP28Q8NHY6 868 aa5.32□□□□□ -1.56
SCFD1-214ENST00000554819 IL17DQ8TAD2 202 aa5.32□□□□□ -1.56
SCFD1-214ENST00000554819 HDAC10Q969S8 669 aa5.32□□□□□ -1.56
SCFD1-214ENST00000554819 CHMP4CQ96CF2 233 aa5.32□□□□□ -1.56
SCFD1-214ENST00000554819 CEP95Q96GE4 821 aa5.32□□□□□ -1.56
SCFD1-214ENST00000554819 LSM14BQ9BX40 385 aaKnown RBP5.32□□□□□ -1.56
SCFD1-214ENST00000554819 SPON1Q9HCB6 807 aa5.32□□□□□ -1.56
SCFD1-214ENST00000554819 TUBD1Q9UJT1 453 aa5.32□□□□□ -1.56
SCFD1-214ENST00000554819 KLRG2A4D1S0 409 aaPredicted RBP5.31□□□□□ -1.56
SCFD1-214ENST00000554819 PLSCR1O15162 318 aa5.31□□□□□ -1.56
SCFD1-214ENST00000554819 RECQL4O94761 1208 aa5.31□□□□□ -1.56
SCFD1-214ENST00000554819 RPLP2P05387 115 aaKnown RBP5.31□□□□□ -1.56
SCFD1-214ENST00000554819 ALOX15P16050 662 aaPredicted RBP5.31□□□□□ -1.56
SCFD1-214ENST00000554819 GUCY1A2P33402 732 aa5.31□□□□□ -1.56
SCFD1-214ENST00000554819 NEK2P51955 445 aa5.31□□□□□ -1.56
SCFD1-214ENST00000554819 CLRN1P58418 232 aa5.31□□□□□ -1.56
SCFD1-214ENST00000554819 KIF23Q02241 960 aaPredicted RBP5.31□□□□□ -1.56
SCFD1-214ENST00000554819 FOXE3Q13461 319 aa5.31□□□□□ -1.56
SCFD1-214ENST00000554819 SEPT2Q15019 361 aa5.31□□□□□ -1.56
SCFD1-214ENST00000554819 ATP2B3Q16720 1220 aa5.31□□□□□ -1.56
SCFD1-214ENST00000554819 RRP12Q5JTH9 1297 aaKnown RBP5.31□□□□□ -1.56
SCFD1-214ENST00000554819 MFSD14BQ5SR56 506 aa5.31□□□□□ -1.56
SCFD1-214ENST00000554819 PPP4R3AQ6IN85 833 aa5.31□□□□□ -1.56
SCFD1-214ENST00000554819 RHOT1Q8IXI2 618 aa5.31□□□□□ -1.56
SCFD1-214ENST00000554819 MIER2Q8N344 545 aa5.31□□□□□ -1.56
SCFD1-214ENST00000554819 CCHCR1Q8TD31 782 aa5.31□□□□□ -1.56
SCFD1-214ENST00000554819 CASKIN2Q8WXE0 1202 aa5.31□□□□□ -1.56
SCFD1-214ENST00000554819 DPF2Q92785 391 aa5.31□□□□□ -1.56
SCFD1-214ENST00000554819 PGBD4Q96DM1 585 aa5.31□□□□□ -1.56
SCFD1-214ENST00000554819 PLEKHG4BQ96PX9 1271 aa5.31□□□□□ -1.56
SCFD1-214ENST00000554819 CSRNP2Q9H175 543 aa5.31□□□□□ -1.56
SCFD1-214ENST00000554819 POGKQ9P215 609 aa5.31□□□□□ -1.56
SCFD1-214ENST00000554819 VCAM1P19320 739 aa5.3□□□□□ -1.56
SCFD1-214ENST00000554819 SLC6A9P48067 706 aa5.3□□□□□ -1.56
SCFD1-214ENST00000554819 ODF1Q14990 250 aa5.3□□□□□ -1.56
SCFD1-214ENST00000554819 C1QL3Q5VWW1 255 aa5.3□□□□□ -1.56
SCFD1-214ENST00000554819 ANKS6Q68DC2 871 aa5.3□□□□□ -1.56
SCFD1-214ENST00000554819 OR2I1PQ8NGU4 316 aa5.3□□□□□ -1.56
SCFD1-214ENST00000554819 STON2Q8WXE9 905 aa5.3□□□□□ -1.56
SCFD1-214ENST00000554819 TFAP2CQ92754 450 aa5.3□□□□□ -1.56
SCFD1-214ENST00000554819 COA7Q96BR5 231 aa5.3□□□□□ -1.56
SCFD1-214ENST00000554819 ZNF503Q96F45 646 aa5.3□□□□□ -1.56
SCFD1-214ENST00000554819 DCLRE1CQ96SD1 692 aaKnown RBP5.3□□□□□ -1.56
SCFD1-214ENST00000554819 KCNH6Q9H252 994 aa5.3□□□□□ -1.56
SCFD1-214ENST00000554819 AASDHPPTQ9NRN7 309 aa5.3□□□□□ -1.56
SCFD1-214ENST00000554819 AJAP1Q9UKB5 411 aaPredicted RBP5.3□□□□□ -1.56
SCFD1-214ENST00000554819 SIK3Q9Y2K2 1263 aa5.3□□□□□ -1.56
SCFD1-214ENST00000554819 ATRNL1Q5VV63 1379 aa5.29□□□□□ -1.56
SCFD1-214ENST00000554819 CXorf49A8MYA2 514 aaPredicted RBP5.29□□□□□ -1.56
SCFD1-214ENST00000554819 DIRC3C9JPN6 131 aa5.29□□□□□ -1.56
SCFD1-214ENST00000554819 MATN3O15232 486 aa5.29□□□□□ -1.56
SCFD1-214ENST00000554819 HTRA2O43464 458 aaPredicted RBP5.29□□□□□ -1.56
SCFD1-214ENST00000554819 GPR32O75388 356 aa5.29□□□□□ -1.56
SCFD1-214ENST00000554819 ALDH1L1O75891 902 aa5.29□□□□□ -1.56
SCFD1-214ENST00000554819 PEX11BO96011 259 aa5.29□□□□□ -1.56
SCFD1-214ENST00000554819 RAP2AP10114 183 aa5.29□□□□□ -1.56
SCFD1-214ENST00000554819 ATP5JP18859 108 aa5.29□□□□□ -1.56
SCFD1-214ENST00000554819 UAP1L1Q3KQV9 507 aa5.29□□□□□ -1.56
SCFD1-214ENST00000554819 RABL3Q5HYI8 236 aa5.29□□□□□ -1.56
SCFD1-214ENST00000554819 MIIPQ5JXC2 388 aa5.29□□□□□ -1.56
SCFD1-214ENST00000554819 TMEM240Q5SV17 173 aa5.29□□□□□ -1.56
SCFD1-214ENST00000554819 ATXN7L2Q5T6C5 722 aaPredicted RBP5.29□□□□□ -1.56
SCFD1-214ENST00000554819 AFMIDQ63HM1 303 aa5.29□□□□□ -1.56
SCFD1-214ENST00000554819 OTUD7BQ6GQQ9 843 aa5.29□□□□□ -1.56
SCFD1-214ENST00000554819 GGNQ86UU5 652 aa5.29□□□□□ -1.56
SCFD1-214ENST00000554819 STAG1Q8WVM7 1258 aa5.29□□□□□ -1.56
SCFD1-214ENST00000554819 FAM193BQ96PV7 902 aaPredicted RBP5.29□□□□□ -1.56
SCFD1-214ENST00000554819 NDC1Q9BTX1 674 aa5.29□□□□□ -1.56
SCFD1-214ENST00000554819 MRI1Q9BV20 369 aa5.29□□□□□ -1.56
SCFD1-214ENST00000554819 CPEB1Q9BZB8 566 aaKnown RBP5.29□□□□□ -1.56
SCFD1-214ENST00000554819 VPS11Q9H270 941 aa5.29□□□□□ -1.56
SCFD1-214ENST00000554819 TDP1Q9NUW8 608 aa5.29□□□□□ -1.56
SCFD1-214ENST00000554819 EIF2B4Q9UI10 523 aaKnown RBP5.29□□□□□ -1.56
SCFD1-214ENST00000554819 LUC7L2Q9Y383 392 aaKnown RBP5.29□□□□□ -1.56
SCFD1-214ENST00000554819 IPPQ9Y573 584 aa5.29□□□□□ -1.56
SCFD1-214ENST00000554819 MYBBP1AQ9BQG0 1328 aaKnown RBP5.28□□□□□ -1.56
SCFD1-214ENST00000554819 E2F8A0AVK6 867 aa5.28□□□□□ -1.56
SCFD1-214ENST00000554819 TRIM24O15164 1050 aa5.28□□□□□ -1.56
SCFD1-214ENST00000554819 SGTAO43765 313 aa5.28□□□□□ -1.56
SCFD1-214ENST00000554819 AMHP03971 560 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms