RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 GFM2Q969S9 779 aaKnown RBP2.02□□□□□ -2.09
PRPF39-208ENST00000554785 EAF2Q96CJ1 260 aaPredicted RBP2.02□□□□□ -2.09
PRPF39-208ENST00000554785 SLC7A6OSQ96CW6 309 aaPredicted RBP2.02□□□□□ -2.09
PRPF39-208ENST00000554785 ORAI2Q96SN7 254 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 SLC13A1Q9BZW2 595 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 PITHD1Q9GZP4 211 aaPredicted RBP2.02□□□□□ -2.09
PRPF39-208ENST00000554785 WNT8AQ9H1J5 351 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 PRDM12Q9H4Q4 367 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 POLR3BQ9NW08 1133 aaPredicted RBP2.02□□□□□ -2.09
PRPF39-208ENST00000554785 SLTMQ9NWH9 1034 aaKnown RBP eCLIP2.02□□□□□ -2.09
PRPF39-208ENST00000554785 DNAJC28Q9NX36 388 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 MKS1Q9NXB0 559 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 ING3Q9NXR8 418 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 GPRC5BQ9NZH0 403 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 GIT1Q9Y2X7 761 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 PPP2R3BQ9Y5P8 575 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 EID1Q9Y6B2 187 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 YEATS2Q9ULM3 1422 aa2.01□□□□□ -2.09
PRPF39-208ENST00000554785 CEP350Q5VT06 3117 aa2.01□□□□□ -2.09
PRPF39-208ENST00000554785 KDM5BQ9UGL1 1544 aa2.01□□□□□ -2.09
PRPF39-208ENST00000554785 A0A0A6YYJ9 748 aa2.01□□□□□ -2.09
PRPF39-208ENST00000554785 ST20-MTHFSA0A0A6YYL1 179 aa2.01□□□□□ -2.09
PRPF39-208ENST00000554785 KLHL33A6NCF5 533 aa2.01□□□□□ -2.09
PRPF39-208ENST00000554785 TRIM75PA6NK02 468 aa2.01□□□□□ -2.09
PRPF39-208ENST00000554785 MARCH6O60337 910 aa2.01□□□□□ -2.09
PRPF39-208ENST00000554785 PCDH8O95206 1070 aa2.01□□□□□ -2.09
PRPF39-208ENST00000554785 PARNO95453 639 aaKnown RBP2.01□□□□□ -2.09
PRPF39-208ENST00000554785 KIR2DL3P43628 341 aa2.01□□□□□ -2.09
PRPF39-208ENST00000554785 RAB27AP51159 221 aa2.01□□□□□ -2.09
PRPF39-208ENST00000554785 KRT85P78386 507 aa2.01□□□□□ -2.09
PRPF39-208ENST00000554785 HHEXQ03014 270 aa2.01□□□□□ -2.09
PRPF39-208ENST00000554785 CD69Q07108 199 aa2.01□□□□□ -2.09
PRPF39-208ENST00000554785 TOB2Q14106 344 aaPredicted RBP2.01□□□□□ -2.09
PRPF39-208ENST00000554785 ELAVL1Q15717 326 aaKnown RBP2.01□□□□□ -2.09
PRPF39-208ENST00000554785 CLUL1Q15846 466 aa2.01□□□□□ -2.09
PRPF39-208ENST00000554785 FAM214AQ32MH5 1076 aa2.01□□□□□ -2.09
PRPF39-208ENST00000554785 TOR2AQ5JU69 321 aa2.01□□□□□ -2.09
PRPF39-208ENST00000554785 PCSK4Q6UW60 755 aa2.01□□□□□ -2.09
PRPF39-208ENST00000554785 BMP8AQ7Z5Y6 402 aa2.01□□□□□ -2.09
PRPF39-208ENST00000554785 PNMA8AQ86V59 439 aaPredicted RBP2.01□□□□□ -2.09
PRPF39-208ENST00000554785 RAVER1Q8IY67 606 aaKnown RBP2.01□□□□□ -2.09
PRPF39-208ENST00000554785 PIK3C3Q8NEB9 887 aa2.01□□□□□ -2.09
PRPF39-208ENST00000554785 NEU4Q8WWR8 484 aaPredicted RBP2.01□□□□□ -2.09
PRPF39-208ENST00000554785 RSAD2Q8WXG1 361 aa2.01□□□□□ -2.09
PRPF39-208ENST00000554785 CLIP3Q96DZ5 547 aa2.01□□□□□ -2.09
PRPF39-208ENST00000554785 HOOK2Q96ED9 719 aa2.01□□□□□ -2.09
PRPF39-208ENST00000554785 RAX2Q96IS3 184 aa2.01□□□□□ -2.09
PRPF39-208ENST00000554785 FDXACB1Q9BRP7 624 aaPredicted RBP2.01□□□□□ -2.09
PRPF39-208ENST00000554785 CCM2LQ9NUG4 571 aaPredicted RBP2.01□□□□□ -2.09
PRPF39-208ENST00000554785 EDARQ9UNE0 448 aa2.01□□□□□ -2.09
PRPF39-208ENST00000554785 MRFAP1Q9Y605 127 aa2.01□□□□□ -2.09
PRPF39-208ENST00000554785 NUMBLQ9Y6R0 609 aa2.01□□□□□ -2.09
PRPF39-208ENST00000554785 XDHP47989 1333 aa2.01□□□□□ -2.09
PRPF39-208ENST00000554785 MYPNQ86TC9 1320 aa2.01□□□□□ -2.09
PRPF39-208ENST00000554785 RICTORQ6R327 1708 aa2.01□□□□□ -2.09
PRPF39-208ENST00000554785 UHRF1BP1Q6BDS2 1440 aa2.01□□□□□ -2.09
PRPF39-208ENST00000554785 DISP1Q96F81 1524 aa2.01□□□□□ -2.09
PRPF39-208ENST00000554785 PCNTO95613 3336 aa2.01□□□□□ -2.09
PRPF39-208ENST00000554785 TTC37Q6PGP7 1564 aa2.01□□□□□ -2.09
PRPF39-208ENST00000554785 LTBP4Q8N2S1 1624 aa2.01□□□□□ -2.09
PRPF39-208ENST00000554785 C3P01024 1663 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 CTTNBP2Q8WZ74 1663 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 E2F8A0AVK6 867 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 KLRG2A4D1S0 409 aaPredicted RBP2□□□□□ -2.09
PRPF39-208ENST00000554785 FZD9O00144 591 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 AKAP10O43572 662 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 XPOTO43592 962 aaKnown RBP2□□□□□ -2.09
PRPF39-208ENST00000554785 PCDHGA12O60330 932 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 FAM20BO75063 409 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 SNUPNO95149 360 aaKnown RBP2□□□□□ -2.09
PRPF39-208ENST00000554785 LPLP06858 475 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 PFKMP08237 780 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 VSIG10L2P0DP72 767 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 GAAP10253 952 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 MTHFD2P13995 350 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 NR4A1P22736 598 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 LGALS4P56470 323 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 MRPS9P82933 396 aaKnown RBP2□□□□□ -2.09
PRPF39-208ENST00000554785 SRSF2Q01130 221 aaKnown RBP2□□□□□ -2.09
PRPF39-208ENST00000554785 CRHR2Q13324 411 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 PIN1Q13526 163 aaPredicted RBP2□□□□□ -2.09
PRPF39-208ENST00000554785 ACAP2Q15057 778 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 NFE2Q16621 373 aaPredicted RBP2□□□□□ -2.09
PRPF39-208ENST00000554785 CPEB4Q17RY0 729 aaKnown RBP eCLIP2□□□□□ -2.09
PRPF39-208ENST00000554785 PITRM1Q5JRX3 1037 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 LDLRAD3Q86YD5 345 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 LYSMD2Q8IV50 215 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 FMNL3Q8IVF7 1028 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 DNAJC10Q8IXB1 793 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 THEMISQ8N1K5 641 aaPredicted RBP2□□□□□ -2.09
PRPF39-208ENST00000554785 MB21D1Q8N884 522 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 PPP1R14CQ8TAE6 165 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 MIEF2Q96C03 454 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 ZNF512Q96ME7 567 aaPredicted RBP2□□□□□ -2.09
PRPF39-208ENST00000554785 MPHOSPH9Q99550 1183 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 PRRX2Q99811 253 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 QRSL1Q9H0R6 528 aaKnown RBP2□□□□□ -2.09
PRPF39-208ENST00000554785 KCTD10Q9H3F6 313 aa2□□□□□ -2.09
PRPF39-208ENST00000554785 AURKAIP1Q9NWT8 199 aaPredicted RBP2□□□□□ -2.09
PRPF39-208ENST00000554785 CHPF2Q9P2E5 772 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms