RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 GRM6O15303 877 aa5.63□□□□□ -1.51
ATXN3-229ENST00000554672 CAND2O75155 1236 aa5.63□□□□□ -1.51
ATXN3-229ENST00000554672 EIF3JO75822 258 aaKnown RBP5.63□□□□□ -1.51
ATXN3-229ENST00000554672 F2P00734 622 aa5.63□□□□□ -1.51
ATXN3-229ENST00000554672 CTNNB1P35222 781 aa5.63□□□□□ -1.51
ATXN3-229ENST00000554672 NDUFV1P49821 464 aa5.63□□□□□ -1.51
ATXN3-229ENST00000554672 VCPP55072 806 aaKnown RBP5.63□□□□□ -1.51
ATXN3-229ENST00000554672 ZNF200P98182 395 aaPredicted RBP5.63□□□□□ -1.51
ATXN3-229ENST00000554672 COASYQ13057 564 aa5.63□□□□□ -1.51
ATXN3-229ENST00000554672 LRRC14Q15048 493 aa5.63□□□□□ -1.51
ATXN3-229ENST00000554672 NAALADL2Q58DX5 795 aa5.63□□□□□ -1.51
ATXN3-229ENST00000554672 ZNF648Q5T619 568 aaPredicted RBP5.63□□□□□ -1.51
ATXN3-229ENST00000554672 SCARA3Q6AZY7 606 aa5.63□□□□□ -1.51
ATXN3-229ENST00000554672 LRFN4Q6PJG9 635 aa5.63□□□□□ -1.51
ATXN3-229ENST00000554672 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.63□□□□□ -1.51
ATXN3-229ENST00000554672 CYFIP1Q7L576 1253 aa5.63□□□□□ -1.51
ATXN3-229ENST00000554672 SERINC5Q86VE9 423 aa5.63□□□□□ -1.51
ATXN3-229ENST00000554672 PPTC7Q8NI37 304 aa5.63□□□□□ -1.51
ATXN3-229ENST00000554672 APBB2Q92870 758 aa5.63□□□□□ -1.51
ATXN3-229ENST00000554672 MSLNLQ96KJ4 702 aa5.63□□□□□ -1.51
ATXN3-229ENST00000554672 FSD1Q9BTV5 496 aa5.63□□□□□ -1.51
ATXN3-229ENST00000554672 PHF7Q9BWX1 381 aaPredicted RBP5.63□□□□□ -1.51
ATXN3-229ENST00000554672 IFIH1Q9BYX4 1025 aaKnown RBP5.63□□□□□ -1.51
ATXN3-229ENST00000554672 NAPBQ9H115 298 aa5.63□□□□□ -1.51
ATXN3-229ENST00000554672 C12orf49Q9H741 205 aa5.63□□□□□ -1.51
ATXN3-229ENST00000554672 FBRSQ9HAH7 460 aa5.63□□□□□ -1.51
ATXN3-229ENST00000554672 TLR9Q9NR96 1032 aa5.63□□□□□ -1.51
ATXN3-229ENST00000554672 ECHDC1Q9NTX5 307 aa5.63□□□□□ -1.51
ATXN3-229ENST00000554672 CYP8B1Q9UNU6 501 aa5.63□□□□□ -1.51
ATXN3-229ENST00000554672 WDR19Q8NEZ3 1342 aa5.63□□□□□ -1.51
ATXN3-229ENST00000554672 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.62□□□□□ -1.51
ATXN3-229ENST00000554672 C17orf102A2RUQ5 167 aa5.62□□□□□ -1.51
ATXN3-229ENST00000554672 M0R2C6 588 aa5.62□□□□□ -1.51
ATXN3-229ENST00000554672 LINC01565O15544 149 aa5.62□□□□□ -1.51
ATXN3-229ENST00000554672 RANBP6O60518 1105 aaKnown RBP5.62□□□□□ -1.51
ATXN3-229ENST00000554672 NMT2O60551 498 aa5.62□□□□□ -1.51
ATXN3-229ENST00000554672 TBX10O75333 385 aa5.62□□□□□ -1.51
ATXN3-229ENST00000554672 SLITRK5O94991 958 aa5.62□□□□□ -1.51
ATXN3-229ENST00000554672 MMP1P03956 469 aa5.62□□□□□ -1.51
ATXN3-229ENST00000554672 USP17L7P0C7H9 530 aa5.62□□□□□ -1.51
ATXN3-229ENST00000554672 TOP1P11387 765 aaKnown RBP5.62□□□□□ -1.51
ATXN3-229ENST00000554672 ICAM3P32942 547 aa5.62□□□□□ -1.51
ATXN3-229ENST00000554672 GTF2F1P35269 517 aaKnown RBP eCLIP5.62□□□□□ -1.51
ATXN3-229ENST00000554672 NBL1P41271 181 aa5.62□□□□□ -1.51
ATXN3-229ENST00000554672 ID4P47928 161 aa5.62□□□□□ -1.51
ATXN3-229ENST00000554672 RRP1P56182 461 aaKnown RBP5.62□□□□□ -1.51
ATXN3-229ENST00000554672 SLBPQ14493 270 aaKnown RBP eCLIP5.62□□□□□ -1.51
ATXN3-229ENST00000554672 SLC23A3Q6PIS1 610 aa5.62□□□□□ -1.51
ATXN3-229ENST00000554672 KCNV1Q6PIU1 500 aa5.62□□□□□ -1.51
ATXN3-229ENST00000554672 ARMCX6Q7L4S7 300 aa5.62□□□□□ -1.51
ATXN3-229ENST00000554672 ASCL5Q7RTU5 278 aa5.62□□□□□ -1.51
ATXN3-229ENST00000554672 MCF2L2Q86YR7 1114 aa5.62□□□□□ -1.51
ATXN3-229ENST00000554672 SIRT2Q8IXJ6 389 aa5.62□□□□□ -1.51
ATXN3-229ENST00000554672 EFHBQ8N7U6 833 aa5.62□□□□□ -1.51
ATXN3-229ENST00000554672 SMRP1Q8NCR6 262 aa5.62□□□□□ -1.51
ATXN3-229ENST00000554672 SYTL5Q8TDW5 730 aaPredicted RBP5.62□□□□□ -1.51
ATXN3-229ENST00000554672 ATP6V0A1Q93050 837 aa5.62□□□□□ -1.51
ATXN3-229ENST00000554672 GAL3ST3Q96A11 431 aa5.62□□□□□ -1.51
ATXN3-229ENST00000554672 RPGRIP1Q96KN7 1286 aa5.62□□□□□ -1.51
ATXN3-229ENST00000554672 RIPOR3Q96MK2 946 aa5.62□□□□□ -1.51
ATXN3-229ENST00000554672 TAAR1Q96RJ0 339 aa5.62□□□□□ -1.51
ATXN3-229ENST00000554672 RMDN3Q96TC7 470 aa5.62□□□□□ -1.51
ATXN3-229ENST00000554672 TMEM47Q9BQJ4 181 aa5.62□□□□□ -1.51
ATXN3-229ENST00000554672 INCENPQ9NQS7 918 aa5.62□□□□□ -1.51
ATXN3-229ENST00000554672 TCP11L1Q9NUJ3 509 aa5.62□□□□□ -1.51
ATXN3-229ENST00000554672 RNF19AQ9NV58 838 aa5.62□□□□□ -1.51
ATXN3-229ENST00000554672 CLEC1BQ9P126 229 aa5.62□□□□□ -1.51
ATXN3-229ENST00000554672 FAM8A1Q9UBU6 413 aa5.62□□□□□ -1.51
ATXN3-229ENST00000554672 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.62□□□□□ -1.51
ATXN3-229ENST00000554672 MRVI1Q9Y6F6 885 aa5.62□□□□□ -1.51
ATXN3-229ENST00000554672 PRR23AA6NEV1 266 aa5.61□□□□□ -1.51
ATXN3-229ENST00000554672 ENPP3O14638 875 aa5.61□□□□□ -1.51
ATXN3-229ENST00000554672 FGRP09769 529 aa5.61□□□□□ -1.51
ATXN3-229ENST00000554672 LINC00271P0C7V0 271 aa5.61□□□□□ -1.51
ATXN3-229ENST00000554672 ZNF286BP0CG31 522 aa5.61□□□□□ -1.51
ATXN3-229ENST00000554672 TGFB3P10600 412 aa5.61□□□□□ -1.51
ATXN3-229ENST00000554672 GNAT1P11488 350 aa5.61□□□□□ -1.51
ATXN3-229ENST00000554672 ATF7P17544 494 aaPredicted RBP5.61□□□□□ -1.51
ATXN3-229ENST00000554672 CAMK1Q14012 370 aa5.61□□□□□ -1.51
ATXN3-229ENST00000554672 BTG3Q14201 252 aaPredicted RBP5.61□□□□□ -1.51
ATXN3-229ENST00000554672 NKG7Q16617 165 aa5.61□□□□□ -1.51
ATXN3-229ENST00000554672 CELF3Q5SZQ8 465 aaKnown RBP5.61□□□□□ -1.51
ATXN3-229ENST00000554672 LCE1DQ5T752 114 aa5.61□□□□□ -1.51
ATXN3-229ENST00000554672 ARHGEF16Q5VV41 709 aa5.61□□□□□ -1.51
ATXN3-229ENST00000554672 FRMPD2Q68DX3 1309 aaPredicted RBP5.61□□□□□ -1.51
ATXN3-229ENST00000554672 RASGRP2Q7LDG7 609 aa5.61□□□□□ -1.51
ATXN3-229ENST00000554672 SPPL3Q8TCT6 385 aa5.61□□□□□ -1.51
ATXN3-229ENST00000554672 PANK1Q8TE04 598 aa5.61□□□□□ -1.51
ATXN3-229ENST00000554672 FAM168AQ92567 244 aa5.61□□□□□ -1.51
ATXN3-229ENST00000554672 TBC1D5Q92609 795 aa5.61□□□□□ -1.51
ATXN3-229ENST00000554672 P2RX5Q93086 422 aa5.61□□□□□ -1.51
ATXN3-229ENST00000554672 NKD2Q969F2 451 aaPredicted RBP5.61□□□□□ -1.51
ATXN3-229ENST00000554672 PLPPR2Q96GM1 343 aa5.61□□□□□ -1.51
ATXN3-229ENST00000554672 SPATA33Q96N06 139 aa5.61□□□□□ -1.51
ATXN3-229ENST00000554672 TTC14Q96N46 770 aa5.61□□□□□ -1.51
ATXN3-229ENST00000554672 C16orf70Q9BSU1 422 aa5.61□□□□□ -1.51
ATXN3-229ENST00000554672 LRRCC1Q9C099 1032 aa5.61□□□□□ -1.51
ATXN3-229ENST00000554672 CHMP4BQ9H444 224 aaKnown RBP5.61□□□□□ -1.51
ATXN3-229ENST00000554672 RNPEPQ9H4A4 650 aa5.61□□□□□ -1.51
ATXN3-229ENST00000554672 USP15Q9Y4E8 981 aaPredicted RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms