RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 SRGAP3O43295 1099 aa5.86□□□□□ -1.47
ATXN3-228ENST00000554592 CDC45O75419 566 aa5.86□□□□□ -1.47
ATXN3-228ENST00000554592 SLC25A27O95847 323 aa5.86□□□□□ -1.47
ATXN3-228ENST00000554592 FGBP02675 491 aa5.86□□□□□ -1.47
ATXN3-228ENST00000554592 C1QTNF9P0C862 333 aa5.86□□□□□ -1.47
ATXN3-228ENST00000554592 AKR1A1P14550 325 aa5.86□□□□□ -1.47
ATXN3-228ENST00000554592 MCAMP43121 646 aa5.86□□□□□ -1.47
ATXN3-228ENST00000554592 CDK7P50613 346 aa5.86□□□□□ -1.47
ATXN3-228ENST00000554592 ACLYP53396 1101 aa5.86□□□□□ -1.47
ATXN3-228ENST00000554592 PPP2R2AP63151 447 aa5.86□□□□□ -1.47
ATXN3-228ENST00000554592 LONRF2Q1L5Z9 754 aa5.86□□□□□ -1.47
ATXN3-228ENST00000554592 HSF5Q4G112 596 aaPredicted RBP5.86□□□□□ -1.47
ATXN3-228ENST00000554592 FOXB2Q5VYV0 432 aa5.86□□□□□ -1.47
ATXN3-228ENST00000554592 PSRC1Q6PGN9 363 aaPredicted RBP5.86□□□□□ -1.47
ATXN3-228ENST00000554592 ZNF365Q70YC5 407 aa5.86□□□□□ -1.47
ATXN3-228ENST00000554592 HOMER1Q86YM7 354 aa5.86□□□□□ -1.47
ATXN3-228ENST00000554592 CERS3Q8IU89 383 aa5.86□□□□□ -1.47
ATXN3-228ENST00000554592 ARHGEF39Q8N4T4 335 aa5.86□□□□□ -1.47
ATXN3-228ENST00000554592 FIBCD1Q8N539 461 aa5.86□□□□□ -1.47
ATXN3-228ENST00000554592 KLHDC9Q8NEP7 349 aa5.86□□□□□ -1.47
ATXN3-228ENST00000554592 APPBP2Q92624 585 aa5.86□□□□□ -1.47
ATXN3-228ENST00000554592 FCRL3Q96P31 734 aaPredicted RBP5.86□□□□□ -1.47
ATXN3-228ENST00000554592 DSCC1Q9BVC3 393 aa5.86□□□□□ -1.47
ATXN3-228ENST00000554592 MTIF3Q9H2K0 278 aaKnown RBP5.86□□□□□ -1.47
ATXN3-228ENST00000554592 NOL6Q9H6R4 1146 aaKnown RBP5.86□□□□□ -1.47
ATXN3-228ENST00000554592 CRTAC1Q9NQ79 661 aa5.86□□□□□ -1.47
ATXN3-228ENST00000554592 CGGBP1Q9UFW8 167 aaPredicted RBP5.86□□□□□ -1.47
ATXN3-228ENST00000554592 TBX21Q9UL17 535 aa5.86□□□□□ -1.47
ATXN3-228ENST00000554592 AKT3Q9Y243 479 aa5.86□□□□□ -1.47
ATXN3-228ENST00000554592 GPR55Q9Y2T6 319 aaPredicted RBP5.86□□□□□ -1.47
ATXN3-228ENST00000554592 EMC9Q9Y3B6 208 aa5.86□□□□□ -1.47
ATXN3-228ENST00000554592 A0A1B0GUL6 1792 aa5.85□□□□□ -1.47
ATXN3-228ENST00000554592 ARVCFO00192 962 aa5.85□□□□□ -1.47
ATXN3-228ENST00000554592 CSF2RAP15509 400 aa5.85□□□□□ -1.47
ATXN3-228ENST00000554592 POU3F3P20264 500 aaPredicted RBP5.85□□□□□ -1.47
ATXN3-228ENST00000554592 ENDOUP21128 410 aaKnown RBP5.85□□□□□ -1.47
ATXN3-228ENST00000554592 GRIA2P42262 883 aa5.85□□□□□ -1.47
ATXN3-228ENST00000554592 DYNLL1P63167 89 aaKnown RBP5.85□□□□□ -1.47
ATXN3-228ENST00000554592 G3BP1Q13283 466 aaKnown RBP eCLIP5.85□□□□□ -1.47
ATXN3-228ENST00000554592 HSP90AA2PQ14568 343 aaPredicted RBP5.85□□□□□ -1.47
ATXN3-228ENST00000554592 PLS1Q14651 629 aa5.85□□□□□ -1.47
ATXN3-228ENST00000554592 KCTD2Q14681 263 aa5.85□□□□□ -1.47
ATXN3-228ENST00000554592 PPP2R5DQ14738 602 aa5.85□□□□□ -1.47
ATXN3-228ENST00000554592 KCNA10Q16322 511 aa5.85□□□□□ -1.47
ATXN3-228ENST00000554592 ALDH1L2Q3SY69 923 aa5.85□□□□□ -1.47
ATXN3-228ENST00000554592 PLEKHG4Q58EX7 1191 aa5.85□□□□□ -1.47
ATXN3-228ENST00000554592 CCDC158Q5M9N0 1113 aa5.85□□□□□ -1.47
ATXN3-228ENST00000554592 YOD1Q5VVQ6 348 aaPredicted RBP5.85□□□□□ -1.47
ATXN3-228ENST00000554592 ADGRA1Q86SQ6 560 aa5.85□□□□□ -1.47
ATXN3-228ENST00000554592 C1QL4Q86Z23 238 aa5.85□□□□□ -1.47
ATXN3-228ENST00000554592 TRIM59Q8IWR1 403 aa5.85□□□□□ -1.47
ATXN3-228ENST00000554592 SIRT2Q8IXJ6 389 aa5.85□□□□□ -1.47
ATXN3-228ENST00000554592 PCSK9Q8NBP7 692 aaKnown RBP5.85□□□□□ -1.47
ATXN3-228ENST00000554592 ZSWIM2Q8NEG5 633 aa5.85□□□□□ -1.47
ATXN3-228ENST00000554592 GLT1D1Q96MS3 346 aa5.85□□□□□ -1.47
ATXN3-228ENST00000554592 PPP1R16BQ96T49 567 aa5.85□□□□□ -1.47
ATXN3-228ENST00000554592 MMP19Q99542 508 aa5.85□□□□□ -1.47
ATXN3-228ENST00000554592 MCMBPQ9BTE3 642 aa5.85□□□□□ -1.47
ATXN3-228ENST00000554592 CDADC1Q9BWV3 514 aa5.85□□□□□ -1.47
ATXN3-228ENST00000554592 NKX2-4Q9H2Z4 354 aa5.85□□□□□ -1.47
ATXN3-228ENST00000554592 IL23AQ9NPF7 189 aa5.85□□□□□ -1.47
ATXN3-228ENST00000554592 FAM184BQ9ULE4 1060 aa5.85□□□□□ -1.47
ATXN3-228ENST00000554592 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.85□□□□□ -1.47
ATXN3-228ENST00000554592 COG5Q9UP83 839 aa5.85□□□□□ -1.47
ATXN3-228ENST00000554592 CNPY2Q9Y2B0 182 aa5.85□□□□□ -1.47
ATXN3-228ENST00000554592 AK9Q5TCS8 1911 aa5.85□□□□□ -1.47
ATXN3-228ENST00000554592 ZNF521Q96K83 1311 aa5.84□□□□□ -1.47
ATXN3-228ENST00000554592 A0A1W2PRG0 241 aa5.84□□□□□ -1.47
ATXN3-228ENST00000554592 ETV2O00321 342 aaPredicted RBP5.84□□□□□ -1.47
ATXN3-228ENST00000554592 NOP56O00567 594 aaKnown RBP5.84□□□□□ -1.47
ATXN3-228ENST00000554592 FGF10O15520 208 aaPredicted RBP5.84□□□□□ -1.47
ATXN3-228ENST00000554592 DUSP11O75319 330 aaKnown RBP5.84□□□□□ -1.47
ATXN3-228ENST00000554592 FLOT1O75955 427 aa5.84□□□□□ -1.47
ATXN3-228ENST00000554592 GNAI3P08754 354 aa5.84□□□□□ -1.47
ATXN3-228ENST00000554592 PNLIPP16233 465 aa5.84□□□□□ -1.47
ATXN3-228ENST00000554592 GLDCP23378 1020 aa5.84□□□□□ -1.47
ATXN3-228ENST00000554592 L1CAMP32004 1257 aa5.84□□□□□ -1.47
ATXN3-228ENST00000554592 GUCY1A2P33402 732 aa5.84□□□□□ -1.47
ATXN3-228ENST00000554592 SHMT1P34896 483 aa5.84□□□□□ -1.47
ATXN3-228ENST00000554592 RAP1GAPP47736 663 aa5.84□□□□□ -1.47
ATXN3-228ENST00000554592 KCNQ1P51787 676 aa5.84□□□□□ -1.47
ATXN3-228ENST00000554592 TFF2Q03403 129 aa5.84□□□□□ -1.47
ATXN3-228ENST00000554592 MTX1Q13505 466 aa5.84□□□□□ -1.47
ATXN3-228ENST00000554592 SEPT2Q15019 361 aa5.84□□□□□ -1.47
ATXN3-228ENST00000554592 TKFCQ3LXA3 575 aa5.84□□□□□ -1.47
ATXN3-228ENST00000554592 TTC39AQ5SRH9 613 aa5.84□□□□□ -1.47
ATXN3-228ENST00000554592 CCSAPQ6IQ19 270 aaPredicted RBP5.84□□□□□ -1.47
ATXN3-228ENST00000554592 C16orf86Q6ZW13 317 aa5.84□□□□□ -1.47
ATXN3-228ENST00000554592 RIOX2Q8IUF8 465 aa5.84□□□□□ -1.47
ATXN3-228ENST00000554592 RPUSD2Q8IZ73 545 aaKnown RBP5.84□□□□□ -1.47
ATXN3-228ENST00000554592 MSL3Q8N5Y2 521 aaKnown RBP5.84□□□□□ -1.47
ATXN3-228ENST00000554592 EXOC2Q96KP1 924 aa5.84□□□□□ -1.47
ATXN3-228ENST00000554592 JMJD8Q96S16 334 aa5.84□□□□□ -1.47
ATXN3-228ENST00000554592 AARSD1Q9BTE6 412 aaKnown RBP5.84□□□□□ -1.47
ATXN3-228ENST00000554592 API5Q9BZZ5 524 aaKnown RBP5.84□□□□□ -1.47
ATXN3-228ENST00000554592 SPC25Q9HBM1 224 aa5.84□□□□□ -1.47
ATXN3-228ENST00000554592 GCM1Q9NP62 436 aa5.84□□□□□ -1.47
ATXN3-228ENST00000554592 CD320Q9NPF0 282 aa5.84□□□□□ -1.47
ATXN3-228ENST00000554592 ACSL6Q9UKU0 697 aa5.84□□□□□ -1.47
ATXN3-228ENST00000554592 MUC3AQ02505 3323 aa5.84□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms