RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 PRKD1Q15139 912 aaPredicted RBP6.64□□□□□ -1.35
SCFD1-211ENST00000554437 MFSD14BQ5SR56 506 aa6.64□□□□□ -1.35
SCFD1-211ENST00000554437 SPTY2D1Q68D10 685 aaPredicted RBP6.64□□□□□ -1.35
SCFD1-211ENST00000554437 ZNF572Q7Z3I7 529 aaPredicted RBP6.64□□□□□ -1.35
SCFD1-211ENST00000554437 FAM83AQ86UY5 434 aa6.64□□□□□ -1.35
SCFD1-211ENST00000554437 XYLT1Q86Y38 959 aa6.64□□□□□ -1.35
SCFD1-211ENST00000554437 PALM2Q8IXS6 379 aa6.64□□□□□ -1.35
SCFD1-211ENST00000554437 CYFIP2Q96F07 1278 aa6.64□□□□□ -1.35
SCFD1-211ENST00000554437 CEP95Q96GE4 821 aa6.64□□□□□ -1.35
SCFD1-211ENST00000554437 TCF7L1Q9HCS4 588 aa6.64□□□□□ -1.35
SCFD1-211ENST00000554437 TMEM140Q9NV12 185 aa6.64□□□□□ -1.35
SCFD1-211ENST00000554437 ZNF180Q9UJW8 692 aa6.64□□□□□ -1.35
SCFD1-211ENST00000554437 G3BP2Q9UN86 482 aaKnown RBP6.64□□□□□ -1.35
SCFD1-211ENST00000554437 ANKRD6Q9Y2G4 727 aa6.64□□□□□ -1.35
SCFD1-211ENST00000554437 IPPQ9Y573 584 aa6.64□□□□□ -1.35
SCFD1-211ENST00000554437 MUSKO15146 869 aa6.63□□□□□ -1.35
SCFD1-211ENST00000554437 CYP27B1O15528 508 aa6.63□□□□□ -1.35
SCFD1-211ENST00000554437 IL2RBP14784 551 aa6.63□□□□□ -1.35
SCFD1-211ENST00000554437 EDNRBP24530 442 aa6.63□□□□□ -1.35
SCFD1-211ENST00000554437 FLT3LGP49771 235 aa6.63□□□□□ -1.35
SCFD1-211ENST00000554437 ADAM17P78536 824 aa6.63□□□□□ -1.35
SCFD1-211ENST00000554437 IL10RAQ13651 578 aa6.63□□□□□ -1.35
SCFD1-211ENST00000554437 C3orf36Q3SXR2 165 aa6.63□□□□□ -1.35
SCFD1-211ENST00000554437 FAM47AQ5JRC9 791 aa6.63□□□□□ -1.35
SCFD1-211ENST00000554437 RAVER1Q8IY67 606 aaKnown RBP6.63□□□□□ -1.35
SCFD1-211ENST00000554437 MDGA1Q8NFP4 955 aa6.63□□□□□ -1.35
SCFD1-211ENST00000554437 ATXN2LQ8WWM7 1075 aaKnown RBP6.63□□□□□ -1.35
SCFD1-211ENST00000554437 CDK5RAP1Q96SZ6 601 aaKnown RBP6.63□□□□□ -1.35
SCFD1-211ENST00000554437 MOCS1Q9NZB8 636 aa6.63□□□□□ -1.35
SCFD1-211ENST00000554437 ZIM2Q9NZV7 527 aa6.63□□□□□ -1.35
SCFD1-211ENST00000554437 AJAP1Q9UKB5 411 aaPredicted RBP6.63□□□□□ -1.35
SCFD1-211ENST00000554437 TTBK1Q5TCY1 1321 aaPredicted RBP6.62□□□□□ -1.35
SCFD1-211ENST00000554437 PRR5-ARHGAP8B1AHC4 643 aa6.62□□□□□ -1.35
SCFD1-211ENST00000554437 ZNF20P17024 532 aa6.62□□□□□ -1.35
SCFD1-211ENST00000554437 VCAM1P19320 739 aa6.62□□□□□ -1.35
SCFD1-211ENST00000554437 HK1P19367 917 aa6.62□□□□□ -1.35
SCFD1-211ENST00000554437 CRHR2Q13324 411 aa6.62□□□□□ -1.35
SCFD1-211ENST00000554437 SP140Q13342 867 aa6.62□□□□□ -1.35
SCFD1-211ENST00000554437 ANKS6Q68DC2 871 aa6.62□□□□□ -1.35
SCFD1-211ENST00000554437 RSPH3Q86UC2 560 aa6.62□□□□□ -1.35
SCFD1-211ENST00000554437 JPH3Q8WXH2 748 aaPredicted RBP6.62□□□□□ -1.35
SCFD1-211ENST00000554437 RAB24Q969Q5 203 aa6.62□□□□□ -1.35
SCFD1-211ENST00000554437 LSM14BQ9BX40 385 aaKnown RBP6.62□□□□□ -1.35
SCFD1-211ENST00000554437 RHOBTB2Q9BYZ6 727 aa6.62□□□□□ -1.35
SCFD1-211ENST00000554437 SPON1Q9HCB6 807 aa6.62□□□□□ -1.35
SCFD1-211ENST00000554437 TDP1Q9NUW8 608 aa6.62□□□□□ -1.35
SCFD1-211ENST00000554437 TCEAL9Q9UHQ7 104 aa6.62□□□□□ -1.35
SCFD1-211ENST00000554437 EID1Q9Y6B2 187 aa6.62□□□□□ -1.35
SCFD1-211ENST00000554437 MYBBP1AQ9BQG0 1328 aaKnown RBP6.61□□□□□ -1.35
SCFD1-211ENST00000554437 B5MCH6 92 aa6.61□□□□□ -1.35
SCFD1-211ENST00000554437 GPR32O75388 356 aa6.61□□□□□ -1.35
SCFD1-211ENST00000554437 RAP2AP10114 183 aa6.61□□□□□ -1.35
SCFD1-211ENST00000554437 ALOX15P16050 662 aaPredicted RBP6.61□□□□□ -1.35
SCFD1-211ENST00000554437 FPR1P21462 350 aa6.61□□□□□ -1.35
SCFD1-211ENST00000554437 GUCY1A2P33402 732 aa6.61□□□□□ -1.35
SCFD1-211ENST00000554437 PTH1RQ03431 593 aa6.61□□□□□ -1.35
SCFD1-211ENST00000554437 AFMIDQ63HM1 303 aa6.61□□□□□ -1.35
SCFD1-211ENST00000554437 PPP4R3AQ6IN85 833 aa6.61□□□□□ -1.35
SCFD1-211ENST00000554437 DOK3Q7L591 496 aa6.61□□□□□ -1.35
SCFD1-211ENST00000554437 SLC35B2Q8TB61 432 aa6.61□□□□□ -1.35
SCFD1-211ENST00000554437 KAT5Q92993 513 aa6.61□□□□□ -1.35
SCFD1-211ENST00000554437 PGBD4Q96DM1 585 aa6.61□□□□□ -1.35
SCFD1-211ENST00000554437 GPR87Q9BY21 358 aa6.61□□□□□ -1.35
SCFD1-211ENST00000554437 RTFDC1Q9BY42 306 aaPredicted RBP6.61□□□□□ -1.35
SCFD1-211ENST00000554437 KRTAP3-1Q9BYR8 98 aa6.61□□□□□ -1.35
SCFD1-211ENST00000554437 CDH19Q9H159 772 aa6.61□□□□□ -1.35
SCFD1-211ENST00000554437 ACTL7AQ9Y615 435 aa6.61□□□□□ -1.35
SCFD1-211ENST00000554437 ATRNL1Q5VV63 1379 aa6.6□□□□□ -1.35
SCFD1-211ENST00000554437 TBKBP1A7MCY6 615 aa6.6□□□□□ -1.35
SCFD1-211ENST00000554437 WNT10BO00744 389 aa6.6□□□□□ -1.35
SCFD1-211ENST00000554437 AMY1AP04745 511 aa6.6□□□□□ -1.35
SCFD1-211ENST00000554437 RPLP2P05387 115 aaKnown RBP6.6□□□□□ -1.35
SCFD1-211ENST00000554437 DDCP20711 480 aa6.6□□□□□ -1.35
SCFD1-211ENST00000554437 PDCP20941 246 aa6.6□□□□□ -1.35
SCFD1-211ENST00000554437 MAN2A2P49641 1150 aa6.6□□□□□ -1.35
SCFD1-211ENST00000554437 CNGB1Q14028 1251 aaPredicted RBP6.6□□□□□ -1.35
SCFD1-211ENST00000554437 R3HDM1Q15032 1099 aaKnown RBP6.6□□□□□ -1.35
SCFD1-211ENST00000554437 Q6ZRM9 215 aa6.6□□□□□ -1.35
SCFD1-211ENST00000554437 ZGPATQ8N5A5 531 aaKnown RBP6.6□□□□□ -1.35
SCFD1-211ENST00000554437 CASKIN2Q8WXE0 1202 aa6.6□□□□□ -1.35
SCFD1-211ENST00000554437 TFAP2CQ92754 450 aa6.6□□□□□ -1.35
SCFD1-211ENST00000554437 TMX3Q96JJ7 454 aa6.6□□□□□ -1.35
SCFD1-211ENST00000554437 CAMKK2Q96RR4 588 aa6.6□□□□□ -1.35
SCFD1-211ENST00000554437 NUP88Q99567 741 aaPredicted RBP6.6□□□□□ -1.35
SCFD1-211ENST00000554437 C1QTNF3Q9BXJ4 246 aa6.6□□□□□ -1.35
SCFD1-211ENST00000554437 CPEB1Q9BZB8 566 aaKnown RBP6.6□□□□□ -1.35
SCFD1-211ENST00000554437 KCNH6Q9H252 994 aa6.6□□□□□ -1.35
SCFD1-211ENST00000554437 CLCA2Q9UQC9 943 aa6.6□□□□□ -1.35
SCFD1-211ENST00000554437 RUVBL1Q9Y265 456 aaKnown RBP6.6□□□□□ -1.35
SCFD1-211ENST00000554437 TESMINQ9Y4I5 508 aa6.6□□□□□ -1.35
SCFD1-211ENST00000554437 CXorf49A8MYA2 514 aaPredicted RBP6.59□□□□□ -1.35
SCFD1-211ENST00000554437 GOLGA6L6A8MZA4 724 aa6.59□□□□□ -1.35
SCFD1-211ENST00000554437 TEX33O43247 280 aa6.59□□□□□ -1.35
SCFD1-211ENST00000554437 DTNBO60941 627 aa6.59□□□□□ -1.35
SCFD1-211ENST00000554437 POU2F2P09086 479 aa6.59□□□□□ -1.35
SCFD1-211ENST00000554437 SNRPA1P09661 255 aaKnown RBP6.59□□□□□ -1.35
SCFD1-211ENST00000554437 AKAP5P24588 427 aa6.59□□□□□ -1.35
SCFD1-211ENST00000554437 PCSK1P29120 753 aa6.59□□□□□ -1.35
SCFD1-211ENST00000554437 ALDH1A3P47895 512 aa6.59□□□□□ -1.35
SCFD1-211ENST00000554437 SCNN1GP51170 649 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms