RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 BAG1Q99933 345 aaPredicted RBP6.6□□□□□ -1.35
VPS33B-203ENST00000554264 UBXN6Q9BZV1 441 aa6.6□□□□□ -1.35
VPS33B-203ENST00000554264 FAM107BQ9H098 131 aa6.6□□□□□ -1.35
VPS33B-203ENST00000554264 MTMR10Q9NXD2 777 aa6.6□□□□□ -1.35
VPS33B-203ENST00000554264 TRMT1Q9NXH9 659 aaKnown RBP6.6□□□□□ -1.35
VPS33B-203ENST00000554264 PPP2R2CQ9Y2T4 447 aa6.6□□□□□ -1.35
VPS33B-203ENST00000554264 FHOD1Q9Y613 1164 aa6.6□□□□□ -1.35
VPS33B-203ENST00000554264 NEDD4P46934 1319 aa6.59□□□□□ -1.35
VPS33B-203ENST00000554264 ITIH6Q6UXX5 1313 aa6.59□□□□□ -1.35
VPS33B-203ENST00000554264 RANBP2P49792 3224 aaKnown RBP6.59□□□□□ -1.35
VPS33B-203ENST00000554264 A0A0G2JLL6 359 aaPredicted RBP6.59□□□□□ -1.35
VPS33B-203ENST00000554264 TULP2O00295 520 aa6.59□□□□□ -1.35
VPS33B-203ENST00000554264 KIF5CO60282 957 aa6.59□□□□□ -1.35
VPS33B-203ENST00000554264 FGRP09769 529 aa6.59□□□□□ -1.35
VPS33B-203ENST00000554264 FDPSP14324 419 aaKnown RBP6.59□□□□□ -1.35
VPS33B-203ENST00000554264 XBP1P17861 261 aa6.59□□□□□ -1.35
VPS33B-203ENST00000554264 HOXA7P31268 230 aaPredicted RBP6.59□□□□□ -1.35
VPS33B-203ENST00000554264 METAP2P50579 478 aaKnown RBP eCLIP6.59□□□□□ -1.35
VPS33B-203ENST00000554264 PMS1P54277 932 aaKnown RBP6.59□□□□□ -1.35
VPS33B-203ENST00000554264 TBX2Q13207 712 aaPredicted RBP6.59□□□□□ -1.35
VPS33B-203ENST00000554264 UBE3CQ15386 1083 aa6.59□□□□□ -1.35
VPS33B-203ENST00000554264 ERCC6LQ2NKX8 1250 aa6.59□□□□□ -1.35
VPS33B-203ENST00000554264 METTL24Q5JXM2 366 aa6.59□□□□□ -1.35
VPS33B-203ENST00000554264 TTC39AQ5SRH9 613 aa6.59□□□□□ -1.35
VPS33B-203ENST00000554264 TDRD10Q5VZ19 366 aaKnown RBP6.59□□□□□ -1.35
VPS33B-203ENST00000554264 TRIM65Q6PJ69 517 aa6.59□□□□□ -1.35
VPS33B-203ENST00000554264 KRBA2Q6ZNG9 492 aa6.59□□□□□ -1.35
VPS33B-203ENST00000554264 RSRC2Q7L4I2 434 aaKnown RBP6.59□□□□□ -1.35
VPS33B-203ENST00000554264 ATG9AQ7Z3C6 839 aa6.59□□□□□ -1.35
VPS33B-203ENST00000554264 PRRT2Q7Z6L0 340 aaPredicted RBP6.59□□□□□ -1.35
VPS33B-203ENST00000554264 MCF2L2Q86YR7 1114 aa6.59□□□□□ -1.35
VPS33B-203ENST00000554264 CNGA4Q8IV77 575 aa6.59□□□□□ -1.35
VPS33B-203ENST00000554264 SCYL3Q8IZE3 742 aa6.59□□□□□ -1.35
VPS33B-203ENST00000554264 AGBL5Q8NDL9 886 aa6.59□□□□□ -1.35
VPS33B-203ENST00000554264 CNNM3Q8NE01 707 aa6.59□□□□□ -1.35
VPS33B-203ENST00000554264 ANKRD20A12PQ8NF67 263 aa6.59□□□□□ -1.35
VPS33B-203ENST00000554264 WDR66Q8TBY9 1149 aa6.59□□□□□ -1.35
VPS33B-203ENST00000554264 SMCR8Q8TEV9 937 aaPredicted RBP6.59□□□□□ -1.35
VPS33B-203ENST00000554264 CPLX3Q8WVH0 158 aa6.59□□□□□ -1.35
VPS33B-203ENST00000554264 RUBCNQ92622 972 aa6.59□□□□□ -1.35
VPS33B-203ENST00000554264 RPGRIP1Q96KN7 1286 aa6.59□□□□□ -1.35
VPS33B-203ENST00000554264 NEUROD6Q96NK8 337 aa6.59□□□□□ -1.35
VPS33B-203ENST00000554264 PUS3Q9BZE2 481 aaKnown RBP6.59□□□□□ -1.35
VPS33B-203ENST00000554264 PRDM14Q9GZV8 571 aa6.59□□□□□ -1.35
VPS33B-203ENST00000554264 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.59□□□□□ -1.35
VPS33B-203ENST00000554264 FOXP1Q9H334 677 aaPredicted RBP6.59□□□□□ -1.35
VPS33B-203ENST00000554264 MED4Q9NPJ6 270 aa6.59□□□□□ -1.35
VPS33B-203ENST00000554264 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.59□□□□□ -1.35
VPS33B-203ENST00000554264 MRFAP1Q9Y605 127 aa6.59□□□□□ -1.35
VPS33B-203ENST00000554264 A0A1B0GUL7 405 aa6.58□□□□□ -1.36
VPS33B-203ENST00000554264 A6NNZ2 444 aa6.58□□□□□ -1.36
VPS33B-203ENST00000554264 URI1O94763 535 aaPredicted RBP6.58□□□□□ -1.36
VPS33B-203ENST00000554264 PDE8BO95263 885 aa6.58□□□□□ -1.36
VPS33B-203ENST00000554264 HMGCRP04035 888 aa6.58□□□□□ -1.36
VPS33B-203ENST00000554264 UQCRFS1P1P0C7P4 283 aa6.58□□□□□ -1.36
VPS33B-203ENST00000554264 PCP11498 1178 aaKnown RBP6.58□□□□□ -1.36
VPS33B-203ENST00000554264 GNAT2P19087 354 aa6.58□□□□□ -1.36
VPS33B-203ENST00000554264 ETFBP38117 255 aa6.58□□□□□ -1.36
VPS33B-203ENST00000554264 RNF4P78317 190 aa6.58□□□□□ -1.36
VPS33B-203ENST00000554264 CCT2P78371 535 aaKnown RBP6.58□□□□□ -1.36
VPS33B-203ENST00000554264 TCP10Q12799 353 aa6.58□□□□□ -1.36
VPS33B-203ENST00000554264 PTPAQ15257 358 aa6.58□□□□□ -1.36
VPS33B-203ENST00000554264 WHAMMP3Q1A5X7 153 aa6.58□□□□□ -1.36
VPS33B-203ENST00000554264 FAM110CQ1W6H9 321 aa6.58□□□□□ -1.36
VPS33B-203ENST00000554264 TUBB8Q3ZCM7 444 aa6.58□□□□□ -1.36
VPS33B-203ENST00000554264 MAP9Q49MG5 647 aa6.58□□□□□ -1.36
VPS33B-203ENST00000554264 IQCEQ6IPM2 695 aa6.58□□□□□ -1.36
VPS33B-203ENST00000554264 CDC42EP5Q6NZY7 148 aa6.58□□□□□ -1.36
VPS33B-203ENST00000554264 CC2D1AQ6P1N0 951 aaPredicted RBP6.58□□□□□ -1.36
VPS33B-203ENST00000554264 LEKR1Q6ZMV7 388 aa6.58□□□□□ -1.36
VPS33B-203ENST00000554264 GADL1Q6ZQY3 521 aa6.58□□□□□ -1.36
VPS33B-203ENST00000554264 Q7L0L9 218 aa6.58□□□□□ -1.36
VPS33B-203ENST00000554264 SRGAP1Q7Z6B7 1085 aa6.58□□□□□ -1.36
VPS33B-203ENST00000554264 REXO1L1PQ8IX06 675 aa6.58□□□□□ -1.36
VPS33B-203ENST00000554264 FAM177A1Q8N128 213 aaPredicted RBP6.58□□□□□ -1.36
VPS33B-203ENST00000554264 SLC43A3Q8NBI5 491 aa6.58□□□□□ -1.36
VPS33B-203ENST00000554264 CTCFLQ8NI51 663 aaPredicted RBP6.58□□□□□ -1.36
VPS33B-203ENST00000554264 DIS3LQ8TF46 1054 aaKnown RBP6.58□□□□□ -1.36
VPS33B-203ENST00000554264 ANAPC16Q96DE5 110 aa6.58□□□□□ -1.36
VPS33B-203ENST00000554264 IQCDQ96DY2 449 aa6.58□□□□□ -1.36
VPS33B-203ENST00000554264 ALG1Q9BT22 464 aa6.58□□□□□ -1.36
VPS33B-203ENST00000554264 HDAC8Q9BY41 377 aa6.58□□□□□ -1.36
VPS33B-203ENST00000554264 KRT23Q9C075 422 aa6.58□□□□□ -1.36
VPS33B-203ENST00000554264 VIPAS39Q9H9C1 493 aa6.58□□□□□ -1.36
VPS33B-203ENST00000554264 FAM86C1Q9NVL1 165 aa6.58□□□□□ -1.36
VPS33B-203ENST00000554264 GPATCH2Q9NW75 528 aa6.58□□□□□ -1.36
VPS33B-203ENST00000554264 ZNF446Q9NWS9 450 aa6.58□□□□□ -1.36
VPS33B-203ENST00000554264 LMCD1Q9NZU5 365 aa6.58□□□□□ -1.36
VPS33B-203ENST00000554264 ZNF214Q9UL59 606 aaPredicted RBP6.58□□□□□ -1.36
VPS33B-203ENST00000554264 ZMYND8Q9ULU4 1186 aaPredicted RBP6.58□□□□□ -1.36
VPS33B-203ENST00000554264 NAP1L2Q9ULW6 460 aaPredicted RBP6.58□□□□□ -1.36
VPS33B-203ENST00000554264 PCDHB10Q9UN67 800 aa6.58□□□□□ -1.36
VPS33B-203ENST00000554264 CLIC4Q9Y696 253 aa6.58□□□□□ -1.36
VPS33B-203ENST00000554264 TAF6LQ9Y6J9 622 aa6.58□□□□□ -1.36
VPS33B-203ENST00000554264 ZHX2Q9Y6X8 837 aa6.58□□□□□ -1.36
VPS33B-203ENST00000554264 MYH6P13533 1939 aa6.58□□□□□ -1.36
VPS33B-203ENST00000554264 MYO5AQ9Y4I1 1855 aaKnown RBP6.58□□□□□ -1.36
VPS33B-203ENST00000554264 RPTORQ8N122 1335 aa6.57□□□□□ -1.36
VPS33B-203ENST00000554264 AKR1B15C9JRZ8 316 aaPredicted RBP6.57□□□□□ -1.36
VPS33B-203ENST00000554264 SH2B2O14492 632 aaPredicted RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms