RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 ATXN3LQ9H3M9 355 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 BRD9Q9H8M2 597 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 MINDY3Q9H8M7 445 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 TOPORSQ9NS56 1045 aaPredicted RBP2.74□□□□□ -1.97
PRPF39-205ENST00000554081 FAM217BQ9NTX9 383 aaPredicted RBP2.74□□□□□ -1.97
PRPF39-205ENST00000554081 FAM13BQ9NYF5 915 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 STXBP5LQ9Y2K9 1186 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 SNX9Q9Y5X1 595 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 HCFC2Q9Y5Z7 792 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 CDY1Q9Y6F8 540 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 BRCA1P38398 1863 aaKnown RBP2.74□□□□□ -1.97
PRPF39-205ENST00000554081 MYO5AQ9Y4I1 1855 aaKnown RBP2.74□□□□□ -1.97
PRPF39-205ENST00000554081 PTPN13Q12923 2485 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 MYH1P12882 1939 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 ADAMTS7Q9UKP4 1686 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 QSER1Q2KHR3 1735 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 SIPA1L3O60292 1781 aaPredicted RBP2.74□□□□□ -1.97
PRPF39-205ENST00000554081 LOC101059915A0A1B0GWI6 518 aaPredicted RBP2.74□□□□□ -1.97
PRPF39-205ENST00000554081 WNT7AO00755 349 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 TBX3O15119 743 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 MED24O75448 989 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 GLUD1P00367 558 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 MMP1P03956 469 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 ITGB1P05556 798 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 SKIP12755 728 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 RNASE9P60153 205 aaKnown RBP2.74□□□□□ -1.97
PRPF39-205ENST00000554081 FAM193AP78312 1265 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 SNW1Q13573 536 aaKnown RBP2.74□□□□□ -1.97
PRPF39-205ENST00000554081 TSR1Q2NL82 804 aaKnown RBP2.74□□□□□ -1.97
PRPF39-205ENST00000554081 UAP1L1Q3KQV9 507 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 ATF7IP2Q5U623 682 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 ZNF746Q6NUN9 644 aaPredicted RBP2.74□□□□□ -1.97
PRPF39-205ENST00000554081 ANO5Q75V66 913 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 SV2BQ7L1I2 683 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 TMEM173Q86WV6 379 aaPredicted RBP2.74□□□□□ -1.97
PRPF39-205ENST00000554081 CATSPER3Q86XQ3 398 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 NPAS4Q8IUM7 802 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 SMAP1Q8IYB5 467 aaPredicted RBP2.74□□□□□ -1.97
PRPF39-205ENST00000554081 ATAD1Q8NBU5 361 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 FBXO18Q8NFZ0 1043 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 TCP11Q8WWU5 503 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 HERVK_113Q902F9 699 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 TOP1MTQ969P6 601 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 CCDC97Q96F63 343 aaPredicted RBP2.74□□□□□ -1.97
PRPF39-205ENST00000554081 ZFYVE19Q96K21 471 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 ACAP3Q96P50 834 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 COLEC11Q9BWP8 271 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 SLC4A5Q9BY07 1137 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 NSUN3Q9H649 340 aaKnown RBP2.74□□□□□ -1.97
PRPF39-205ENST00000554081 RPF1Q9H9Y2 349 aaKnown RBP2.74□□□□□ -1.97
PRPF39-205ENST00000554081 USP18Q9UMW8 372 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 PCDHA11Q9Y5I1 949 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 UBIAD1Q9Y5Z9 338 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 CLIC4Q9Y696 253 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 SALL3Q9BXA9 1300 aa2.74□□□□□ -1.97
PRPF39-205ENST00000554081 SLC38A8A6NNN8 435 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 RIOK3O14730 519 aaKnown RBP2.73□□□□□ -1.97
PRPF39-205ENST00000554081 STX6O43752 255 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 PFKFB2O60825 505 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 DGAT1O75907 488 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 PDGFBP01127 241 aaPredicted RBP2.73□□□□□ -1.97
PRPF39-205ENST00000554081 PLA2G4BP0C869 781 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 CXCL8P10145 99 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 DARSP14868 501 aaKnown RBP2.73□□□□□ -1.97
PRPF39-205ENST00000554081 ARF4P18085 180 aaPredicted RBP2.73□□□□□ -1.97
PRPF39-205ENST00000554081 SYT1P21579 422 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 CIITAP33076 1130 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 GPC3P51654 580 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 USP11P51784 963 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 CRYBB1P53674 252 aaPredicted RBP2.73□□□□□ -1.97
PRPF39-205ENST00000554081 ARID5AQ03989 594 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 GRIN1Q05586 938 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 EPHA7Q15375 998 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 PTPN14Q15678 1187 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 ARSIQ5FYB1 569 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 CCDC181Q5TID7 509 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 ELMSAN1Q6PJG2 1045 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 TSSK4Q6SA08 328 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 ABHD15Q6UXT9 468 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 CEP68Q76N32 757 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 ARMCX6Q7L4S7 300 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 SIX5Q8N196 739 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 TTC30BQ8N4P2 665 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 ASAP3Q8TDY4 903 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 SREK1Q8WXA9 508 aaKnown RBP2.73□□□□□ -1.97
PRPF39-205ENST00000554081 RNF34Q969K3 372 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 C18orf25Q96B23 403 aaPredicted RBP2.73□□□□□ -1.97
PRPF39-205ENST00000554081 KCTD12Q96CX2 325 aaKnown RBP2.73□□□□□ -1.97
PRPF39-205ENST00000554081 FAM122AQ96E09 287 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 ZNF396Q96N95 335 aaPredicted RBP2.73□□□□□ -1.97
PRPF39-205ENST00000554081 ASB2Q96Q27 587 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 KXD1Q9BQD3 176 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 FTHL17Q9BXU8 183 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 EMILIN2Q9BXX0 1053 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 SMG9Q9H0W8 520 aaKnown RBP2.73□□□□□ -1.97
PRPF39-205ENST00000554081 SMOC2Q9H3U7 446 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 SH2B1Q9NRF2 756 aaPredicted RBP2.73□□□□□ -1.97
PRPF39-205ENST00000554081 TBC1D13Q9NVG8 400 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 NRBP1Q9UHY1 535 aa2.73□□□□□ -1.97
PRPF39-205ENST00000554081 PLAGL2Q9UPG8 496 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms