RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 RRP1BQ14684 758 aaKnown RBP10.16□□□□□ -0.78
SIX4-202ENST00000554079 ZNF174Q15697 407 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 PTPROQ16827 1216 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 ZNF423Q2M1K9 1284 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 MYLK3Q32MK0 819 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 NAALADL2Q58DX5 795 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 FAAH2Q6GMR7 532 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 BORAQ6PGQ7 559 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 RGS9BPQ6ZS82 235 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 CCDC84Q86UT8 332 aaPredicted RBP10.16□□□□□ -0.78
SIX4-202ENST00000554079 TRIM22Q8IYM9 498 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 SLC7A5P1Q8MH63 180 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 TPCN2Q8NHX9 752 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 GIPC3Q8TF64 312 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 C7orf43Q8WVR3 580 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 PRPF31Q8WWY3 499 aaKnown RBP10.16□□□□□ -0.78
SIX4-202ENST00000554079 SENP6Q9GZR1 1112 aaPredicted RBP10.16□□□□□ -0.78
SIX4-202ENST00000554079 RETREG1Q9H6L5 497 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 PLGRKTQ9HBL7 147 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 ERVK-5Q9HDB9 667 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 NDE1Q9NXR1 346 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 DKK3Q9UBP4 350 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 FRMD4BQ9Y2L6 1034 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 RTCBQ9Y3I0 505 aaKnown RBP10.16□□□□□ -0.78
SIX4-202ENST00000554079 AKAP11Q9UKA4 1901 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 ARFGEF2Q9Y6D5 1785 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 A0A088AWK7 358 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 B4E1Z4 1266 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 C2CD2LO14523 706 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 NDC80O14777 642 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 EDF1O60869 148 aaKnown RBP10.16□□□□□ -0.78
SIX4-202ENST00000554079 USP1O94782 785 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 HSPA8P11142 646 aaKnown RBP10.16□□□□□ -0.78
SIX4-202ENST00000554079 LIFRP42702 1097 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 PTGIRP43119 386 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 RPL21P46778 160 aaKnown RBP10.16□□□□□ -0.78
SIX4-202ENST00000554079 BCAP31P51572 246 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 DMPKQ09013 629 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 ASPHQ12797 758 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 DHX34Q14147 1143 aaKnown RBP10.16□□□□□ -0.78
SIX4-202ENST00000554079 MAN2A1Q16706 1144 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 SFT2D3Q587I9 215 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 TTC38Q5R3I4 469 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 IL23RQ5VWK5 629 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 NLRP9Q7RTR0 991 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 PHLDB2Q86SQ0 1253 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 PIP4K2CQ8TBX8 421 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 SPOCK2Q92563 424 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 TNFRSF25Q93038 417 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 NSMCE3Q96MG7 304 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 CRNKL1Q9BZJ0 848 aaKnown RBP10.16□□□□□ -0.78
SIX4-202ENST00000554079 SCHIP1Q9P0W5 487 aaPredicted RBP10.16□□□□□ -0.78
SIX4-202ENST00000554079 CEP72Q9P209 647 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 ARMCX3Q9UH62 379 aaPredicted RBP10.16□□□□□ -0.78
SIX4-202ENST00000554079 ASAP1Q9ULH1 1129 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 TRAF3IP3Q9Y228 551 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 CARD8Q9Y2G2 431 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 COQ6Q9Y2Z9 468 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 PCDHA3Q9Y5H8 950 aa10.16□□□□□ -0.78
SIX4-202ENST00000554079 ABCB11O95342 1321 aa10.15□□□□□ -0.78
SIX4-202ENST00000554079 ZNF335Q9H4Z2 1342 aaPredicted RBP10.15□□□□□ -0.78
SIX4-202ENST00000554079 MARF1Q9Y4F3 1742 aaKnown RBP10.15□□□□□ -0.78
SIX4-202ENST00000554079 MGEA5O60502 916 aa10.15□□□□□ -0.78
SIX4-202ENST00000554079 NOL4O94818 638 aa10.15□□□□□ -0.78
SIX4-202ENST00000554079 GAS8O95995 478 aa10.15□□□□□ -0.78
SIX4-202ENST00000554079 TKTP29401 623 aaKnown RBP10.15□□□□□ -0.78
SIX4-202ENST00000554079 IL9RQ01113 521 aa10.15□□□□□ -0.78
SIX4-202ENST00000554079 DNAJC3Q13217 504 aa10.15□□□□□ -0.78
SIX4-202ENST00000554079 PDK3Q15120 406 aa10.15□□□□□ -0.78
SIX4-202ENST00000554079 PPP2R5EQ16537 467 aa10.15□□□□□ -0.78
SIX4-202ENST00000554079 TMEM67Q5HYA8 995 aa10.15□□□□□ -0.78
SIX4-202ENST00000554079 SNRNP48Q6IEG0 339 aaKnown RBP10.15□□□□□ -0.78
SIX4-202ENST00000554079 PPP1R21Q6ZMI0 780 aa10.15□□□□□ -0.78
SIX4-202ENST00000554079 ADGRG6Q86SQ4 1221 aa10.15□□□□□ -0.78
SIX4-202ENST00000554079 WDR75Q8IWA0 830 aaKnown RBP10.15□□□□□ -0.78
SIX4-202ENST00000554079 LZTR1Q8N653 840 aa10.15□□□□□ -0.78
SIX4-202ENST00000554079 TRPC4APQ8TEL6 797 aa10.15□□□□□ -0.78
SIX4-202ENST00000554079 PYROXD1Q8WU10 500 aa10.15□□□□□ -0.78
SIX4-202ENST00000554079 GLG1Q92896 1179 aa10.15□□□□□ -0.78
SIX4-202ENST00000554079 HES6Q96HZ4 224 aa10.15□□□□□ -0.78
SIX4-202ENST00000554079 SLCO1B3Q9NPD5 702 aa10.15□□□□□ -0.78
SIX4-202ENST00000554079 RABL2AQ9UBK7 228 aaPredicted RBP10.15□□□□□ -0.78
SIX4-202ENST00000554079 FAF1Q9UNN5 650 aaPredicted RBP10.15□□□□□ -0.78
SIX4-202ENST00000554079 DOLKQ9UPQ8 538 aa10.15□□□□□ -0.78
SIX4-202ENST00000554079 C15orf38-AP3S2A0A0A6YYH1 394 aa10.14□□□□□ -0.79
SIX4-202ENST00000554079 GYG2O15488 501 aa10.14□□□□□ -0.79
SIX4-202ENST00000554079 DKC1O60832 514 aaKnown RBP eCLIP10.14□□□□□ -0.79
SIX4-202ENST00000554079 PHF2O75151 1096 aa10.14□□□□□ -0.79
SIX4-202ENST00000554079 FGGP02679 453 aa10.14□□□□□ -0.79
SIX4-202ENST00000554079 IFIT1P09914 478 aaKnown RBP10.14□□□□□ -0.79
SIX4-202ENST00000554079 KRT2P35908 639 aa10.14□□□□□ -0.79
SIX4-202ENST00000554079 COG7P83436 770 aa10.14□□□□□ -0.79
SIX4-202ENST00000554079 MECOMQ03112 1051 aa10.14□□□□□ -0.79
SIX4-202ENST00000554079 MAPK7Q13164 816 aa10.14□□□□□ -0.79
SIX4-202ENST00000554079 KYNUQ16719 465 aa10.14□□□□□ -0.79
SIX4-202ENST00000554079 RABL6Q3YEC7 729 aaPredicted RBP10.14□□□□□ -0.79
SIX4-202ENST00000554079 KCTD21Q4G0X4 260 aa10.14□□□□□ -0.79
SIX4-202ENST00000554079 ANKRD20A4Q4UJ75 823 aa10.14□□□□□ -0.79
SIX4-202ENST00000554079 HSP90AA5PQ58FG0 334 aa10.14□□□□□ -0.79
SIX4-202ENST00000554079 DCAF12L1Q5VU92 463 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms