RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 RPF1Q9H9Y2 349 aaKnown RBP11.37□□□□□ -0.59
TMEM55B-205ENST00000554028 PTPRHQ9HD43 1115 aa11.37□□□□□ -0.59
TMEM55B-205ENST00000554028 AGPAT5Q9NUQ2 364 aa11.37□□□□□ -0.59
TMEM55B-205ENST00000554028 RBAKQ9NYW8 714 aaPredicted RBP11.37□□□□□ -0.59
TMEM55B-205ENST00000554028 IMPACTQ9P2X3 320 aa11.37□□□□□ -0.59
TMEM55B-205ENST00000554028 NOC2LQ9Y3T9 749 aaKnown RBP11.37□□□□□ -0.59
TMEM55B-205ENST00000554028 MYH11P35749 1972 aa11.36□□□□□ -0.59
TMEM55B-205ENST00000554028 SCN10AQ9Y5Y9 1956 aa11.36□□□□□ -0.59
TMEM55B-205ENST00000554028 TTLL13PA6NNM8 815 aa11.36□□□□□ -0.59
TMEM55B-205ENST00000554028 P4HA2O15460 535 aa11.36□□□□□ -0.59
TMEM55B-205ENST00000554028 TEX33O43247 280 aa11.36□□□□□ -0.59
TMEM55B-205ENST00000554028 IL18RAPO95256 599 aa11.36□□□□□ -0.59
TMEM55B-205ENST00000554028 PARNO95453 639 aaKnown RBP11.36□□□□□ -0.59
TMEM55B-205ENST00000554028 CD4P01730 458 aa11.36□□□□□ -0.59
TMEM55B-205ENST00000554028 EDN1P05305 212 aa11.36□□□□□ -0.59
TMEM55B-205ENST00000554028 SELPP16109 830 aa11.36□□□□□ -0.59
TMEM55B-205ENST00000554028 TNNI1P19237 187 aa11.36□□□□□ -0.59
TMEM55B-205ENST00000554028 GTF2H1P32780 548 aa11.36□□□□□ -0.59
TMEM55B-205ENST00000554028 AP3M2P53677 418 aa11.36□□□□□ -0.59
TMEM55B-205ENST00000554028 YARSP54577 528 aaKnown RBP11.36□□□□□ -0.59
TMEM55B-205ENST00000554028 CYP24A1Q07973 514 aa11.36□□□□□ -0.59
TMEM55B-205ENST00000554028 MGAT3Q09327 533 aa11.36□□□□□ -0.59
TMEM55B-205ENST00000554028 TRIM14Q14142 442 aa11.36□□□□□ -0.59
TMEM55B-205ENST00000554028 PSMD6Q15008 389 aa11.36□□□□□ -0.59
TMEM55B-205ENST00000554028 TRIM71Q2Q1W2 868 aaKnown RBP11.36□□□□□ -0.59
TMEM55B-205ENST00000554028 ZNF618Q5T7W0 954 aa11.36□□□□□ -0.59
TMEM55B-205ENST00000554028 EEF1DP3Q658K8 133 aa11.36□□□□□ -0.59
TMEM55B-205ENST00000554028 TWF2Q6IBS0 349 aaKnown RBP11.36□□□□□ -0.59
TMEM55B-205ENST00000554028 ANKRD33Q7Z3H0 272 aa11.36□□□□□ -0.59
TMEM55B-205ENST00000554028 TMC6Q7Z403 805 aa11.36□□□□□ -0.59
TMEM55B-205ENST00000554028 VSTM4Q8IW00 320 aa11.36□□□□□ -0.59
TMEM55B-205ENST00000554028 CD302Q8IX05 232 aa11.36□□□□□ -0.59
TMEM55B-205ENST00000554028 SPC24Q8NBT2 197 aa11.36□□□□□ -0.59
TMEM55B-205ENST00000554028 TMEM40Q8WWA1 233 aa11.36□□□□□ -0.59
TMEM55B-205ENST00000554028 DHX38Q92620 1227 aaKnown RBP11.36□□□□□ -0.59
TMEM55B-205ENST00000554028 WNT8BQ93098 351 aa11.36□□□□□ -0.59
TMEM55B-205ENST00000554028 CCDC127Q96BQ5 260 aa11.36□□□□□ -0.59
TMEM55B-205ENST00000554028 FAM212AQ96EL1 285 aa11.36□□□□□ -0.59
TMEM55B-205ENST00000554028 MS4A3Q96HJ5 214 aa11.36□□□□□ -0.59
TMEM55B-205ENST00000554028 ACAP3Q96P50 834 aa11.36□□□□□ -0.59
TMEM55B-205ENST00000554028 PPP1R9BQ96SB3 815 aa11.36□□□□□ -0.59
TMEM55B-205ENST00000554028 MMRN2Q9H8L6 949 aa11.36□□□□□ -0.59
TMEM55B-205ENST00000554028 SCUBE2Q9NQ36 999 aa11.36□□□□□ -0.59
TMEM55B-205ENST00000554028 ST3GAL5Q9UNP4 418 aa11.36□□□□□ -0.59
TMEM55B-205ENST00000554028 KAT6AQ92794 2004 aa11.35□□□□□ -0.59
TMEM55B-205ENST00000554028 ATMINO43313 823 aaPredicted RBP11.35□□□□□ -0.59
TMEM55B-205ENST00000554028 NRDCO43847 1150 aa11.35□□□□□ -0.59
TMEM55B-205ENST00000554028 NPTXRO95502 500 aa11.35□□□□□ -0.59
TMEM55B-205ENST00000554028 STAG3L1P0CL83 205 aa11.35□□□□□ -0.59
TMEM55B-205ENST00000554028 DLATP10515 647 aaKnown RBP11.35□□□□□ -0.59
TMEM55B-205ENST00000554028 GHRP10912 638 aa11.35□□□□□ -0.59
TMEM55B-205ENST00000554028 COL6A1P12109 1028 aa11.35□□□□□ -0.59
TMEM55B-205ENST00000554028 SKIP12755 728 aa11.35□□□□□ -0.59
TMEM55B-205ENST00000554028 HOXA11P31270 313 aaPredicted RBP11.35□□□□□ -0.59
TMEM55B-205ENST00000554028 GRM5P41594 1212 aa11.35□□□□□ -0.59
TMEM55B-205ENST00000554028 GSDMDP57764 484 aa11.35□□□□□ -0.59
TMEM55B-205ENST00000554028 OSTNP61366 133 aa11.35□□□□□ -0.59
TMEM55B-205ENST00000554028 TLE2Q04725 743 aa11.35□□□□□ -0.59
TMEM55B-205ENST00000554028 RBL2Q08999 1139 aa11.35□□□□□ -0.59
TMEM55B-205ENST00000554028 SYCP1Q15431 976 aa11.35□□□□□ -0.59
TMEM55B-205ENST00000554028 MIIPQ5JXC2 388 aa11.35□□□□□ -0.59
TMEM55B-205ENST00000554028 FBXO47Q5MNV8 452 aa11.35□□□□□ -0.59
TMEM55B-205ENST00000554028 GBP6Q6ZN66 633 aa11.35□□□□□ -0.59
TMEM55B-205ENST00000554028 LRRC8DQ7L1W4 858 aa11.35□□□□□ -0.59
TMEM55B-205ENST00000554028 FAM228AQ86W67 206 aa11.35□□□□□ -0.59
TMEM55B-205ENST00000554028 CDR2LQ86X02 465 aaPredicted RBP11.35□□□□□ -0.59
TMEM55B-205ENST00000554028 BRSK2Q8IWQ3 736 aa11.35□□□□□ -0.59
TMEM55B-205ENST00000554028 ZNF397Q8NF99 534 aaPredicted RBP11.35□□□□□ -0.59
TMEM55B-205ENST00000554028 PARD3BQ8TEW8 1205 aa11.35□□□□□ -0.59
TMEM55B-205ENST00000554028 CACTINQ8WUQ7 758 aaKnown RBP11.35□□□□□ -0.59
TMEM55B-205ENST00000554028 SLC35C1Q96A29 364 aa11.35□□□□□ -0.59
TMEM55B-205ENST00000554028 TRIM44Q96DX7 344 aaPredicted RBP11.35□□□□□ -0.59
TMEM55B-205ENST00000554028 PAWRQ96IZ0 340 aaKnown RBP11.35□□□□□ -0.59
TMEM55B-205ENST00000554028 PDLIM2Q96JY6 352 aa11.35□□□□□ -0.59
TMEM55B-205ENST00000554028 ERGIC2Q96RQ1 377 aa11.35□□□□□ -0.59
TMEM55B-205ENST00000554028 TOPORSQ9NS56 1045 aaPredicted RBP11.35□□□□□ -0.59
TMEM55B-205ENST00000554028 CPSF3Q9UKF6 684 aaKnown RBP11.35□□□□□ -0.59
TMEM55B-205ENST00000554028 ATP11BQ9Y2G3 1177 aa11.35□□□□□ -0.59
TMEM55B-205ENST00000554028 R3HCC1Q9Y3T6 440 aaKnown RBP11.35□□□□□ -0.59
TMEM55B-205ENST00000554028 ITIH6Q6UXX5 1313 aa11.35□□□□□ -0.59
TMEM55B-205ENST00000554028 GTPBP10A4D1E9 387 aaKnown RBP11.34□□□□□ -0.59
TMEM55B-205ENST00000554028 ABLIM1O14639 778 aa11.34□□□□□ -0.59
TMEM55B-205ENST00000554028 PHACTR2O75167 634 aa11.34□□□□□ -0.59
TMEM55B-205ENST00000554028 ADRB2P07550 413 aa11.34□□□□□ -0.59
TMEM55B-205ENST00000554028 TRIM49P0CI25 452 aa11.34□□□□□ -0.59
TMEM55B-205ENST00000554028 TRIM49CP0CI26 452 aa11.34□□□□□ -0.59
TMEM55B-205ENST00000554028 TRIM21P19474 475 aaKnown RBP11.34□□□□□ -0.59
TMEM55B-205ENST00000554028 CD52P31358 61 aa11.34□□□□□ -0.59
TMEM55B-205ENST00000554028 FMO5P49326 533 aa11.34□□□□□ -0.59
TMEM55B-205ENST00000554028 MYL7Q01449 175 aa11.34□□□□□ -0.59
TMEM55B-205ENST00000554028 LPIN1Q14693 890 aa11.34□□□□□ -0.59
TMEM55B-205ENST00000554028 EXOC3L4Q17RC7 722 aa11.34□□□□□ -0.59
TMEM55B-205ENST00000554028 DUOXA2Q1HG44 320 aa11.34□□□□□ -0.59
TMEM55B-205ENST00000554028 TSR1Q2NL82 804 aaKnown RBP11.34□□□□□ -0.59
TMEM55B-205ENST00000554028 TRIM60Q495X7 471 aa11.34□□□□□ -0.59
TMEM55B-205ENST00000554028 SEZ6Q53EL9 994 aa11.34□□□□□ -0.59
TMEM55B-205ENST00000554028 KRT39Q6A163 491 aa11.34□□□□□ -0.59
TMEM55B-205ENST00000554028 CRELD2Q6UXH1 353 aaPredicted RBP11.34□□□□□ -0.59
TMEM55B-205ENST00000554028 CCDC150Q8NCX0 1101 aa11.34□□□□□ -0.59
TMEM55B-205ENST00000554028 NEK11Q8NG66 645 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms