RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 LCHNA4D1U4 455 aa3.52□□□□□ -1.85
SRP54-204ENST00000553923 FAM83GA6ND36 823 aa3.52□□□□□ -1.85
SRP54-204ENST00000553923 NRP2O60462 931 aa3.52□□□□□ -1.85
SRP54-204ENST00000553923 ITGA10O75578 1167 aa3.52□□□□□ -1.85
SRP54-204ENST00000553923 CHN2P52757 468 aa3.52□□□□□ -1.85
SRP54-204ENST00000553923 PROK1P58294 105 aa3.52□□□□□ -1.85
SRP54-204ENST00000553923 GPR158Q5T848 1215 aa3.52□□□□□ -1.85
SRP54-204ENST00000553923 ARHGEF25Q86VW2 580 aa3.52□□□□□ -1.85
SRP54-204ENST00000553923 MAPKAPK5Q8IW41 473 aa3.52□□□□□ -1.85
SRP54-204ENST00000553923 EFHBQ8N7U6 833 aa3.52□□□□□ -1.85
SRP54-204ENST00000553923 SLC35B2Q8TB61 432 aa3.52□□□□□ -1.85
SRP54-204ENST00000553923 SNX33Q8WV41 574 aa3.52□□□□□ -1.85
SRP54-204ENST00000553923 ARMC5Q96C12 935 aa3.52□□□□□ -1.85
SRP54-204ENST00000553923 SRPK1Q96SB4 655 aaKnown RBP3.52□□□□□ -1.85
SRP54-204ENST00000553923 CDC5LQ99459 802 aaKnown RBP3.52□□□□□ -1.85
SRP54-204ENST00000553923 HIRIP3Q9BW71 556 aaPredicted RBP3.52□□□□□ -1.85
SRP54-204ENST00000553923 MTFR1LQ9H019 292 aa3.52□□□□□ -1.85
SRP54-204ENST00000553923 KLK15Q9H2R5 256 aa3.52□□□□□ -1.85
SRP54-204ENST00000553923 PRDM12Q9H4Q4 367 aa3.52□□□□□ -1.85
SRP54-204ENST00000553923 KMT5AQ9NQR1 393 aa3.52□□□□□ -1.85
SRP54-204ENST00000553923 PPP1R1BQ9UD71 204 aaPredicted RBP3.52□□□□□ -1.85
SRP54-204ENST00000553923 PRSS50Q9UI38 385 aa3.52□□□□□ -1.85
SRP54-204ENST00000553923 MSRAQ9UJ68 235 aa3.52□□□□□ -1.85
SRP54-204ENST00000553923 NUMBLQ9Y6R0 609 aa3.52□□□□□ -1.85
SRP54-204ENST00000553923 PNPLA7Q6ZV29 1317 aa3.51□□□□□ -1.85
SRP54-204ENST00000553923 WNT10BO00744 389 aa3.51□□□□□ -1.85
SRP54-204ENST00000553923 F2P00734 622 aa3.51□□□□□ -1.85
SRP54-204ENST00000553923 ZNF81P51508 661 aa3.51□□□□□ -1.85
SRP54-204ENST00000553923 NRG3P56975 720 aa3.51□□□□□ -1.85
SRP54-204ENST00000553923 KRTAP10-6P60371 365 aaPredicted RBP3.51□□□□□ -1.85
SRP54-204ENST00000553923 DSG1Q02413 1049 aa3.51□□□□□ -1.85
SRP54-204ENST00000553923 ZNF425Q6IV72 752 aa3.51□□□□□ -1.85
SRP54-204ENST00000553923 LMBR1LQ6UX01 489 aa3.51□□□□□ -1.85
SRP54-204ENST00000553923 UBE2R2Q712K3 238 aaPredicted RBP3.51□□□□□ -1.85
SRP54-204ENST00000553923 KIF18BQ86Y91 864 aa3.51□□□□□ -1.85
SRP54-204ENST00000553923 OR56A1Q8NGH5 318 aa3.51□□□□□ -1.85
SRP54-204ENST00000553923 ZFP28Q8NHY6 868 aa3.51□□□□□ -1.85
SRP54-204ENST00000553923 MDM1Q8TC05 714 aa3.51□□□□□ -1.85
SRP54-204ENST00000553923 FERMT2Q96AC1 680 aa3.51□□□□□ -1.85
SRP54-204ENST00000553923 NACC2Q96BF6 587 aa3.51□□□□□ -1.85
SRP54-204ENST00000553923 SLC29A3Q9BZD2 475 aa3.51□□□□□ -1.85
SRP54-204ENST00000553923 TANGO6Q9C0B7 1094 aa3.51□□□□□ -1.85
SRP54-204ENST00000553923 KIAA1586Q9HCI6 787 aa3.51□□□□□ -1.85
SRP54-204ENST00000553923 GPRC5DQ9NZD1 345 aa3.51□□□□□ -1.85
SRP54-204ENST00000553923 ARPP21Q9UBL0 812 aaPredicted RBP3.51□□□□□ -1.85
SRP54-204ENST00000553923 ATP11BQ9Y2G3 1177 aa3.51□□□□□ -1.85
SRP54-204ENST00000553923 CCDC78A2IDD5 438 aa3.5□□□□□ -1.85
SRP54-204ENST00000553923 PJA2O43164 708 aa3.5□□□□□ -1.85
SRP54-204ENST00000553923 GASTP01350 101 aa3.5□□□□□ -1.85
SRP54-204ENST00000553923 XPAP23025 273 aaPredicted RBP3.5□□□□□ -1.85
SRP54-204ENST00000553923 GTF2F1P35269 517 aaKnown RBP eCLIP3.5□□□□□ -1.85
SRP54-204ENST00000553923 FLT3P36888 993 aa3.5□□□□□ -1.85
SRP54-204ENST00000553923 PHC1P78364 1004 aa3.5□□□□□ -1.85
SRP54-204ENST00000553923 MEF2AQ02078 507 aaPredicted RBP3.5□□□□□ -1.85
SRP54-204ENST00000553923 OCA2Q04671 838 aa3.5□□□□□ -1.85
SRP54-204ENST00000553923 SQSTM1Q13501 440 aa3.5□□□□□ -1.85
SRP54-204ENST00000553923 TRIM25Q14258 630 aaKnown RBP3.5□□□□□ -1.85
SRP54-204ENST00000553923 CFAP100Q494V2 611 aa3.5□□□□□ -1.85
SRP54-204ENST00000553923 PRAMEF14Q5SWL7 426 aa3.5□□□□□ -1.85
SRP54-204ENST00000553923 ZNF788Q6ZQV5 615 aa3.5□□□□□ -1.85
SRP54-204ENST00000553923 NXPE1Q8N323 547 aa3.5□□□□□ -1.85
SRP54-204ENST00000553923 ZNF366Q8N895 744 aa3.5□□□□□ -1.85
SRP54-204ENST00000553923 CHTF18Q8WVB6 975 aa3.5□□□□□ -1.85
SRP54-204ENST00000553923 BOD1Q96IK1 185 aa3.5□□□□□ -1.85
SRP54-204ENST00000553923 ALOXE3Q9BYJ1 711 aa3.5□□□□□ -1.85
SRP54-204ENST00000553923 MS4A5Q9H3V2 200 aa3.5□□□□□ -1.85
SRP54-204ENST00000553923 PPP2R3BQ9Y5P8 575 aa3.5□□□□□ -1.85
SRP54-204ENST00000553923 ST20-MTHFSA0A0A6YYL1 179 aa3.49□□□□□ -1.85
SRP54-204ENST00000553923 LOC105371045A0A1W2PR82 267 aa3.49□□□□□ -1.85
SRP54-204ENST00000553923 ZNF891A8MT65 544 aaPredicted RBP3.49□□□□□ -1.85
SRP54-204ENST00000553923 IGSF3O75054 1194 aa3.49□□□□□ -1.85
SRP54-204ENST00000553923 RFPL3O75679 317 aa3.49□□□□□ -1.85
SRP54-204ENST00000553923 CTSSP25774 331 aa3.49□□□□□ -1.85
SRP54-204ENST00000553923 FLT3LGP49771 235 aa3.49□□□□□ -1.85
SRP54-204ENST00000553923 MANFP55145 182 aaKnown RBP3.49□□□□□ -1.85
SRP54-204ENST00000553923 CLRN1P58418 232 aa3.49□□□□□ -1.85
SRP54-204ENST00000553923 SRSF4Q08170 494 aaKnown RBP3.49□□□□□ -1.85
SRP54-204ENST00000553923 FAM47AQ5JRC9 791 aa3.49□□□□□ -1.85
SRP54-204ENST00000553923 ATXN7L2Q5T6C5 722 aaPredicted RBP3.49□□□□□ -1.85
SRP54-204ENST00000553923 GLB1L2Q8IW92 636 aa3.49□□□□□ -1.85
SRP54-204ENST00000553923 ZNF610Q8N9Z0 462 aa3.49□□□□□ -1.85
SRP54-204ENST00000553923 KRTAP2-2Q9BYT5 123 aa3.49□□□□□ -1.85
SRP54-204ENST00000553923 IFT57Q9NWB7 429 aa3.49□□□□□ -1.85
SRP54-204ENST00000553923 SLC17A6Q9P2U8 582 aa3.49□□□□□ -1.85
SRP54-204ENST00000553923 ZNF70Q9UC06 446 aaPredicted RBP3.49□□□□□ -1.85
SRP54-204ENST00000553923 ZKSCAN5Q9Y2L8 839 aa3.49□□□□□ -1.85
SRP54-204ENST00000553923 ATRNL1Q5VV63 1379 aa3.49□□□□□ -1.85
SRP54-204ENST00000553923 CXorf49A8MYA2 514 aaPredicted RBP3.48□□□□□ -1.85
SRP54-204ENST00000553923 PPP1R12AO14974 1030 aaPredicted RBP3.48□□□□□ -1.85
SRP54-204ENST00000553923 KCNAB3O43448 404 aa3.48□□□□□ -1.85
SRP54-204ENST00000553923 PRAMEF4O60810 478 aa3.48□□□□□ -1.85
SRP54-204ENST00000553923 POU3F2P20265 443 aaPredicted RBP3.48□□□□□ -1.85
SRP54-204ENST00000553923 CRHR1P34998 444 aa3.48□□□□□ -1.85
SRP54-204ENST00000553923 MXRA7P84157 204 aa3.48□□□□□ -1.85
SRP54-204ENST00000553923 PPARAQ07869 468 aa3.48□□□□□ -1.85
SRP54-204ENST00000553923 TSHZ3Q63HK5 1081 aa3.48□□□□□ -1.85
SRP54-204ENST00000553923 RSAD2Q8WXG1 361 aa3.48□□□□□ -1.85
SRP54-204ENST00000553923 DPF1Q92782 380 aa3.48□□□□□ -1.85
SRP54-204ENST00000553923 TIMP4Q99727 224 aa3.48□□□□□ -1.85
SRP54-204ENST00000553923 ZSWIM1Q9BR11 485 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms