RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 IL17AQ16552 155 aa17.61■□□□□ 0.41
ACTN1-209ENST00000553659 CALCRLQ16602 461 aa17.61■□□□□ 0.41
ACTN1-209ENST00000553659 NOMO2Q5JPE7 1267 aa17.61■□□□□ 0.41
ACTN1-209ENST00000553659 ATAT1Q5SQI0 421 aa17.61■□□□□ 0.41
ACTN1-209ENST00000553659 RARS2Q5T160 578 aaKnown RBP17.61■□□□□ 0.41
ACTN1-209ENST00000553659 GLB1LQ6UWU2 654 aa17.61■□□□□ 0.41
ACTN1-209ENST00000553659 TMEM173Q86WV6 379 aaPredicted RBP17.61■□□□□ 0.41
ACTN1-209ENST00000553659 ETNPPLQ8TBG4 499 aa17.61■□□□□ 0.41
ACTN1-209ENST00000553659 CCDC47Q96A33 483 aaKnown RBP17.61■□□□□ 0.41
ACTN1-209ENST00000553659 JPH2Q9BR39 696 aaPredicted RBP17.61■□□□□ 0.41
ACTN1-209ENST00000553659 TMEM60Q9H2L4 133 aa17.61■□□□□ 0.41
ACTN1-209ENST00000553659 TBC1D13Q9NVG8 400 aa17.61■□□□□ 0.41
ACTN1-209ENST00000553659 DZANK1Q9NVP4 752 aa17.61■□□□□ 0.41
ACTN1-209ENST00000553659 PIN4Q9Y237 131 aaKnown RBP17.61■□□□□ 0.41
ACTN1-209ENST00000553659 STK24Q9Y6E0 443 aa17.61■□□□□ 0.41
ACTN1-209ENST00000553659 DENND4AQ7Z401 1863 aa17.61■□□□□ 0.41
ACTN1-209ENST00000553659 A0A087X0B3 334 aa17.6■□□□□ 0.41
ACTN1-209ENST00000553659 OFD1O75665 1012 aa17.6■□□□□ 0.41
ACTN1-209ENST00000553659 WEE2P0C1S8 567 aa17.6■□□□□ 0.41
ACTN1-209ENST00000553659 PRR29P0C7W0 189 aa17.6■□□□□ 0.41
ACTN1-209ENST00000553659 PPP1R2P41236 205 aa17.6■□□□□ 0.41
ACTN1-209ENST00000553659 GSDMDP57764 484 aa17.6■□□□□ 0.41
ACTN1-209ENST00000553659 AMPD3Q01432 767 aa17.6■□□□□ 0.41
ACTN1-209ENST00000553659 KIAA1841Q6NSI8 718 aa17.6■□□□□ 0.41
ACTN1-209ENST00000553659 ANO5Q75V66 913 aa17.6■□□□□ 0.41
ACTN1-209ENST00000553659 CATSPER4Q7RTX7 472 aa17.6■□□□□ 0.41
ACTN1-209ENST00000553659 KSR1Q8IVT5 923 aa17.6■□□□□ 0.41
ACTN1-209ENST00000553659 ZDHHC14Q8IZN3 488 aa17.6■□□□□ 0.41
ACTN1-209ENST00000553659 C12orf76Q8N812 135 aaPredicted RBP17.6■□□□□ 0.41
ACTN1-209ENST00000553659 SLC22A17Q8WUG5 538 aa17.6■□□□□ 0.41
ACTN1-209ENST00000553659 AUTS2Q8WXX7 1259 aa17.6■□□□□ 0.41
ACTN1-209ENST00000553659 CALML4Q96GE6 196 aa17.6■□□□□ 0.41
ACTN1-209ENST00000553659 LRRC27Q9C0I9 530 aa17.6■□□□□ 0.41
ACTN1-209ENST00000553659 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.6■□□□□ 0.41
ACTN1-209ENST00000553659 C2orf16Q68DN1 1984 aa17.59■□□□□ 0.41
ACTN1-209ENST00000553659 MEIS3P2A8K0S8 358 aa17.59■□□□□ 0.41
ACTN1-209ENST00000553659 RNASELQ05823 741 aaKnown RBP17.59■□□□□ 0.41
ACTN1-209ENST00000553659 CABP7Q86V35 215 aa17.59■□□□□ 0.41
ACTN1-209ENST00000553659 PPFIBP1Q86W92 1011 aa17.59■□□□□ 0.41
ACTN1-209ENST00000553659 PLCD3Q8N3E9 789 aa17.59■□□□□ 0.41
ACTN1-209ENST00000553659 IGSF22Q8N9C0 903 aa17.59■□□□□ 0.41
ACTN1-209ENST00000553659 ATOH1Q92858 354 aaPredicted RBP17.59■□□□□ 0.41
ACTN1-209ENST00000553659 PGBD4Q96DM1 585 aa17.59■□□□□ 0.41
ACTN1-209ENST00000553659 NLRP4Q96MN2 994 aa17.59■□□□□ 0.41
ACTN1-209ENST00000553659 MTMR9Q96QG7 549 aa17.59■□□□□ 0.41
ACTN1-209ENST00000553659 IFT122Q9HBG6 1241 aa17.59■□□□□ 0.41
ACTN1-209ENST00000553659 DDX25Q9UHL0 483 aaKnown RBP17.59■□□□□ 0.41
ACTN1-209ENST00000553659 DBR1Q9UK59 544 aaKnown RBP17.59■□□□□ 0.41
ACTN1-209ENST00000553659 USTQ9Y2C2 406 aa17.59■□□□□ 0.41
ACTN1-209ENST00000553659 INPP5FQ9Y2H2 1132 aa17.59■□□□□ 0.41
ACTN1-209ENST00000553659 PLXNA3P51805 1871 aa17.58■□□□□ 0.41
ACTN1-209ENST00000553659 EPCAMP16422 314 aa17.58■□□□□ 0.4
ACTN1-209ENST00000553659 AFMP43652 599 aa17.58■□□□□ 0.4
ACTN1-209ENST00000553659 KCNB1Q14721 858 aa17.58■□□□□ 0.4
ACTN1-209ENST00000553659 PLA2G4FQ68DD2 849 aa17.58■□□□□ 0.4
ACTN1-209ENST00000553659 TDRD5Q8NAT2 981 aaKnown RBP17.58■□□□□ 0.4
ACTN1-209ENST00000553659 BCL7CQ8WUZ0 217 aaPredicted RBP17.58■□□□□ 0.4
ACTN1-209ENST00000553659 CYP26B1Q9NR63 512 aa17.58■□□□□ 0.4
ACTN1-209ENST00000553659 AGPAT5Q9NUQ2 364 aa17.58■□□□□ 0.4
ACTN1-209ENST00000553659 FAM86C1Q9NVL1 165 aa17.58■□□□□ 0.4
ACTN1-209ENST00000553659 DNAJB4Q9UDY4 337 aa17.58■□□□□ 0.4
ACTN1-209ENST00000553659 STK17AQ9UEE5 414 aa17.58■□□□□ 0.4
ACTN1-209ENST00000553659 LIMD1Q9UGP4 676 aa17.58■□□□□ 0.4
ACTN1-209ENST00000553659 PCDHB2Q9Y5E7 798 aa17.58■□□□□ 0.4
ACTN1-209ENST00000553659 EML1O00423 815 aa17.57■□□□□ 0.4
ACTN1-209ENST00000553659 NRDCO43847 1150 aa17.57■□□□□ 0.4
ACTN1-209ENST00000553659 DKC1O60832 514 aaKnown RBP eCLIP17.57■□□□□ 0.4
ACTN1-209ENST00000553659 QARSP47897 775 aaKnown RBP17.57■□□□□ 0.4
ACTN1-209ENST00000553659 SLC11A1P49279 550 aa17.57■□□□□ 0.4
ACTN1-209ENST00000553659 PPP2R5CQ13362 524 aa17.57■□□□□ 0.4
ACTN1-209ENST00000553659 AGMOQ6ZNB7 445 aa17.57■□□□□ 0.4
ACTN1-209ENST00000553659 ZNF280BQ86YH2 543 aa17.57■□□□□ 0.4
ACTN1-209ENST00000553659 EXOC8Q8IYI6 725 aa17.57■□□□□ 0.4
ACTN1-209ENST00000553659 SPC24Q8NBT2 197 aa17.57■□□□□ 0.4
ACTN1-209ENST00000553659 FAM20AQ96MK3 541 aa17.57■□□□□ 0.4
ACTN1-209ENST00000553659 GBP3Q9H0R5 595 aa17.57■□□□□ 0.4
ACTN1-209ENST00000553659 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.57■□□□□ 0.4
ACTN1-209ENST00000553659 STK39Q9UEW8 545 aa17.57■□□□□ 0.4
ACTN1-209ENST00000553659 COL4A3BPQ9Y5P4 624 aa17.57■□□□□ 0.4
ACTN1-209ENST00000553659 TDRD15B5MCY1 1934 aaKnown RBP17.57■□□□□ 0.4
ACTN1-209ENST00000553659 CACNA1HO95180 2353 aa17.56■□□□□ 0.4
ACTN1-209ENST00000553659 A0A087WWV3 80 aa17.56■□□□□ 0.4
ACTN1-209ENST00000553659 H0Y858 1186 aa17.56■□□□□ 0.4
ACTN1-209ENST00000553659 TBX3O15119 743 aa17.56■□□□□ 0.4
ACTN1-209ENST00000553659 GALR2O43603 387 aaPredicted RBP17.56■□□□□ 0.4
ACTN1-209ENST00000553659 SLC37A4O43826 429 aa17.56■□□□□ 0.4
ACTN1-209ENST00000553659 GFRA3O60609 400 aa17.56■□□□□ 0.4
ACTN1-209ENST00000553659 ALDH2P05091 517 aa17.56■□□□□ 0.4
ACTN1-209ENST00000553659 ASGR2P07307 311 aa17.56■□□□□ 0.4
ACTN1-209ENST00000553659 NPEPPSP55786 919 aa17.56■□□□□ 0.4
ACTN1-209ENST00000553659 FANCCQ00597 558 aa17.56■□□□□ 0.4
ACTN1-209ENST00000553659 KARSQ15046 597 aaKnown RBP17.56■□□□□ 0.4
ACTN1-209ENST00000553659 PTPN14Q15678 1187 aa17.56■□□□□ 0.4
ACTN1-209ENST00000553659 KRT79Q5XKE5 535 aa17.56■□□□□ 0.4
ACTN1-209ENST00000553659 SRGAP1Q7Z6B7 1085 aa17.56■□□□□ 0.4
ACTN1-209ENST00000553659 MRPL10Q7Z7H8 261 aaKnown RBP17.56■□□□□ 0.4
ACTN1-209ENST00000553659 POTEDQ86YR6 584 aa17.56■□□□□ 0.4
ACTN1-209ENST00000553659 SLFN12Q8IYM2 578 aa17.56■□□□□ 0.4
ACTN1-209ENST00000553659 GRAMD1CQ8IYS0 662 aa17.56■□□□□ 0.4
ACTN1-209ENST00000553659 URGCPQ8TCY9 931 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms