RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 FSD2A1L4K1 749 aa6.43□□□□□ -1.38
SMARCE1P3-201ENST00000553649 C17orf102A2RUQ5 167 aa6.43□□□□□ -1.38
SMARCE1P3-201ENST00000553649 CAND2O75155 1236 aa6.43□□□□□ -1.38
SMARCE1P3-201ENST00000553649 EIF3JO75822 258 aaKnown RBP6.43□□□□□ -1.38
SMARCE1P3-201ENST00000553649 GGPS1O95749 300 aa6.43□□□□□ -1.38
SMARCE1P3-201ENST00000553649 F2P00734 622 aa6.43□□□□□ -1.38
SMARCE1P3-201ENST00000553649 PRNPP04156 253 aa6.43□□□□□ -1.38
SMARCE1P3-201ENST00000553649 FGRP09769 529 aa6.43□□□□□ -1.38
SMARCE1P3-201ENST00000553649 HSPD1P10809 573 aaKnown RBP6.43□□□□□ -1.38
SMARCE1P3-201ENST00000553649 IBSPP21815 317 aaPredicted RBP6.43□□□□□ -1.38
SMARCE1P3-201ENST00000553649 HOXA13P31271 388 aaPredicted RBP6.43□□□□□ -1.38
SMARCE1P3-201ENST00000553649 NMIQ13287 307 aaPredicted RBP6.43□□□□□ -1.38
SMARCE1P3-201ENST00000553649 ALX1Q15699 326 aa6.43□□□□□ -1.38
SMARCE1P3-201ENST00000553649 HSDL1Q3SXM5 330 aa6.43□□□□□ -1.38
SMARCE1P3-201ENST00000553649 MCMDC2Q4G0Z9 681 aa6.43□□□□□ -1.38
SMARCE1P3-201ENST00000553649 GPATCH4Q5T3I0 446 aaKnown RBP6.43□□□□□ -1.38
SMARCE1P3-201ENST00000553649 ANKRD45Q5TZF3 282 aa6.43□□□□□ -1.38
SMARCE1P3-201ENST00000553649 ANKRD54Q6NXT1 300 aa6.43□□□□□ -1.38
SMARCE1P3-201ENST00000553649 CAPN12Q6ZSI9 719 aa6.43□□□□□ -1.38
SMARCE1P3-201ENST00000553649 ZNF589Q86UQ0 364 aaPredicted RBP6.43□□□□□ -1.38
SMARCE1P3-201ENST00000553649 SERINC5Q86VE9 423 aa6.43□□□□□ -1.38
SMARCE1P3-201ENST00000553649 C1orf210Q8IVY1 113 aa6.43□□□□□ -1.38
SMARCE1P3-201ENST00000553649 ADGRF4Q8IZF3 695 aa6.43□□□□□ -1.38
SMARCE1P3-201ENST00000553649 ZDHHC14Q8IZN3 488 aa6.43□□□□□ -1.38
SMARCE1P3-201ENST00000553649 RGS22Q8NE09 1264 aa6.43□□□□□ -1.38
SMARCE1P3-201ENST00000553649 POF1BQ8WVV4 589 aa6.43□□□□□ -1.38
SMARCE1P3-201ENST00000553649 ESR2Q92731 530 aa6.43□□□□□ -1.38
SMARCE1P3-201ENST00000553649 EVI5LQ96CN4 794 aa6.43□□□□□ -1.38
SMARCE1P3-201ENST00000553649 BBC3Q96PG8 261 aaPredicted RBP6.43□□□□□ -1.38
SMARCE1P3-201ENST00000553649 IWS1Q96ST2 819 aa6.43□□□□□ -1.38
SMARCE1P3-201ENST00000553649 HNRNPABQ99729 332 aaKnown RBP6.43□□□□□ -1.38
SMARCE1P3-201ENST00000553649 KRTAP4-5Q9BYR2 181 aa6.43□□□□□ -1.38
SMARCE1P3-201ENST00000553649 EPC1Q9H2F5 836 aa6.43□□□□□ -1.38
SMARCE1P3-201ENST00000553649 TLE6Q9H808 572 aa6.43□□□□□ -1.38
SMARCE1P3-201ENST00000553649 KAT14Q9H8E8 782 aa6.43□□□□□ -1.38
SMARCE1P3-201ENST00000553649 MLXIPQ9HAP2 919 aa6.43□□□□□ -1.38
SMARCE1P3-201ENST00000553649 PXMP2Q9NR77 195 aa6.43□□□□□ -1.38
SMARCE1P3-201ENST00000553649 HELLSQ9NRZ9 838 aa6.43□□□□□ -1.38
SMARCE1P3-201ENST00000553649 TCP11L1Q9NUJ3 509 aa6.43□□□□□ -1.38
SMARCE1P3-201ENST00000553649 CACNA2D2Q9NY47 1150 aa6.43□□□□□ -1.38
SMARCE1P3-201ENST00000553649 MRPL11Q9Y3B7 192 aaKnown RBP6.43□□□□□ -1.38
SMARCE1P3-201ENST00000553649 NEDD4P46934 1319 aa6.43□□□□□ -1.38
SMARCE1P3-201ENST00000553649 DSPP15924 2871 aaKnown RBP6.42□□□□□ -1.38
SMARCE1P3-201ENST00000553649 IGSF10Q6WRI0 2623 aa6.42□□□□□ -1.38
SMARCE1P3-201ENST00000553649 NOP56O00567 594 aaKnown RBP6.42□□□□□ -1.38
SMARCE1P3-201ENST00000553649 TREHO43280 583 aa6.42□□□□□ -1.38
SMARCE1P3-201ENST00000553649 SART1O43290 800 aaKnown RBP6.42□□□□□ -1.38
SMARCE1P3-201ENST00000553649 PRMT3O60678 531 aa6.42□□□□□ -1.38
SMARCE1P3-201ENST00000553649 PPFIA4O75335 1185 aa6.42□□□□□ -1.38
SMARCE1P3-201ENST00000553649 KIF4AO95239 1232 aa6.42□□□□□ -1.38
SMARCE1P3-201ENST00000553649 PARP1P09874 1014 aaKnown RBP6.42□□□□□ -1.38
SMARCE1P3-201ENST00000553649 SMIM10L2AP0DMW4 78 aa6.42□□□□□ -1.38
SMARCE1P3-201ENST00000553649 SMIM10L2BP0DMW5 78 aa6.42□□□□□ -1.38
SMARCE1P3-201ENST00000553649 SNHG28P0DPA3 235 aa6.42□□□□□ -1.38
SMARCE1P3-201ENST00000553649 FOSL1P15407 271 aa6.42□□□□□ -1.38
SMARCE1P3-201ENST00000553649 UBA1P22314 1058 aaKnown RBP6.42□□□□□ -1.38
SMARCE1P3-201ENST00000553649 SP4Q02446 784 aa6.42□□□□□ -1.38
SMARCE1P3-201ENST00000553649 HYAL2Q12891 473 aa6.42□□□□□ -1.38
SMARCE1P3-201ENST00000553649 AAMPQ13685 434 aa6.42□□□□□ -1.38
SMARCE1P3-201ENST00000553649 DUSP6Q16828 381 aa6.42□□□□□ -1.38
SMARCE1P3-201ENST00000553649 SGO2Q562F6 1265 aa6.42□□□□□ -1.38
SMARCE1P3-201ENST00000553649 CELF3Q5SZQ8 465 aaKnown RBP6.42□□□□□ -1.38
SMARCE1P3-201ENST00000553649 ANKRD34AQ69YU3 496 aa6.42□□□□□ -1.38
SMARCE1P3-201ENST00000553649 IL31RAQ8NI17 732 aa6.42□□□□□ -1.38
SMARCE1P3-201ENST00000553649 RASGRP4Q8TDF6 673 aa6.42□□□□□ -1.38
SMARCE1P3-201ENST00000553649 MAP4K1Q92918 833 aa6.42□□□□□ -1.38
SMARCE1P3-201ENST00000553649 RILPL2Q969X0 211 aa6.42□□□□□ -1.38
SMARCE1P3-201ENST00000553649 TTC14Q96N46 770 aa6.42□□□□□ -1.38
SMARCE1P3-201ENST00000553649 CDCA3Q99618 268 aaPredicted RBP6.42□□□□□ -1.38
SMARCE1P3-201ENST00000553649 SAP130Q9H0E3 1048 aa6.42□□□□□ -1.38
SMARCE1P3-201ENST00000553649 RNF41Q9H4P4 317 aaPredicted RBP6.42□□□□□ -1.38
SMARCE1P3-201ENST00000553649 SETD4Q9NVD3 440 aa6.42□□□□□ -1.38
SMARCE1P3-201ENST00000553649 WASF3Q9UPY6 502 aa6.42□□□□□ -1.38
SMARCE1P3-201ENST00000553649 NLRC5Q86WI3 1866 aa6.41□□□□□ -1.38
SMARCE1P3-201ENST00000553649 CARNS1A5YM72 827 aa6.41□□□□□ -1.38
SMARCE1P3-201ENST00000553649 TMEM8BA6NDV4 472 aa6.41□□□□□ -1.38
SMARCE1P3-201ENST00000553649 B4E1Z4 1266 aa6.41□□□□□ -1.38
SMARCE1P3-201ENST00000553649 H3BRB1 525 aa6.41□□□□□ -1.38
SMARCE1P3-201ENST00000553649 ZNF213O14771 459 aa6.41□□□□□ -1.38
SMARCE1P3-201ENST00000553649 SMNDC1O75940 238 aaKnown RBP eCLIP6.41□□□□□ -1.38
SMARCE1P3-201ENST00000553649 LGALS2P05162 132 aa6.41□□□□□ -1.38
SMARCE1P3-201ENST00000553649 DCNP07585 359 aaKnown RBP6.41□□□□□ -1.38
SMARCE1P3-201ENST00000553649 GHRP10912 638 aa6.41□□□□□ -1.38
SMARCE1P3-201ENST00000553649 GLULP15104 373 aa6.41□□□□□ -1.38
SMARCE1P3-201ENST00000553649 NCLP19338 710 aaKnown RBP6.41□□□□□ -1.38
SMARCE1P3-201ENST00000553649 MAP4P27816 1152 aaKnown RBP6.41□□□□□ -1.38
SMARCE1P3-201ENST00000553649 TECP42680 631 aa6.41□□□□□ -1.38
SMARCE1P3-201ENST00000553649 ARHGAP4P98171 946 aa6.41□□□□□ -1.38
SMARCE1P3-201ENST00000553649 SP2Q02086 613 aa6.41□□□□□ -1.38
SMARCE1P3-201ENST00000553649 ZNF528Q3MIS6 628 aa6.41□□□□□ -1.38
SMARCE1P3-201ENST00000553649 ASPRV1Q53RT3 343 aa6.41□□□□□ -1.38
SMARCE1P3-201ENST00000553649 SPECC1Q5M775 1068 aa6.41□□□□□ -1.38
SMARCE1P3-201ENST00000553649 UTP14CQ5TAP6 766 aaKnown RBP6.41□□□□□ -1.38
SMARCE1P3-201ENST00000553649 HGSNATQ68CP4 663 aa6.41□□□□□ -1.38
SMARCE1P3-201ENST00000553649 PHLDB3Q6NSJ2 640 aa6.41□□□□□ -1.38
SMARCE1P3-201ENST00000553649 IQCA1Q86XH1 822 aa6.41□□□□□ -1.38
SMARCE1P3-201ENST00000553649 DGKHQ86XP1 1220 aa6.41□□□□□ -1.38
SMARCE1P3-201ENST00000553649 HOMER1Q86YM7 354 aa6.41□□□□□ -1.38
SMARCE1P3-201ENST00000553649 CEP120Q8N960 986 aa6.41□□□□□ -1.38
SMARCE1P3-201ENST00000553649 ZBTB44Q8NCP5 570 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms