RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 SPECC1Q5M775 1068 aa5.58□□□□□ -1.52
VTI1B-202ENST00000553619 HYIQ5T013 277 aa5.58□□□□□ -1.52
VTI1B-202ENST00000553619 IQSEC1Q6DN90 963 aa5.58□□□□□ -1.52
VTI1B-202ENST00000553619 NCAPH2Q6IBW4 605 aa5.58□□□□□ -1.52
VTI1B-202ENST00000553619 ZNF746Q6NUN9 644 aaPredicted RBP5.58□□□□□ -1.52
VTI1B-202ENST00000553619 MIS18BP1Q6P0N0 1132 aa5.58□□□□□ -1.52
VTI1B-202ENST00000553619 LRSAM1Q6UWE0 723 aa5.58□□□□□ -1.52
VTI1B-202ENST00000553619 MAMDC4Q6UXC1 1216 aa5.58□□□□□ -1.52
VTI1B-202ENST00000553619 SEPT14Q6ZU15 432 aa5.58□□□□□ -1.52
VTI1B-202ENST00000553619 ZNF765Q7L2R6 523 aa5.58□□□□□ -1.52
VTI1B-202ENST00000553619 OTUD6AQ7L8S5 288 aa5.58□□□□□ -1.52
VTI1B-202ENST00000553619 TP53INP2Q8IXH6 220 aa5.58□□□□□ -1.52
VTI1B-202ENST00000553619 SMAP1Q8IYB5 467 aaPredicted RBP5.58□□□□□ -1.52
VTI1B-202ENST00000553619 PDILTQ8N807 584 aa5.58□□□□□ -1.52
VTI1B-202ENST00000553619 CYP2W1Q8TAV3 490 aa5.58□□□□□ -1.52
VTI1B-202ENST00000553619 DHX58Q96C10 678 aa5.58□□□□□ -1.52
VTI1B-202ENST00000553619 FBXL18Q96ME1 805 aa5.58□□□□□ -1.52
VTI1B-202ENST00000553619 PANK2Q9BZ23 570 aa5.58□□□□□ -1.52
VTI1B-202ENST00000553619 PORCNQ9H237 461 aa5.58□□□□□ -1.52
VTI1B-202ENST00000553619 ABHD16BQ9H3Z7 469 aa5.58□□□□□ -1.52
VTI1B-202ENST00000553619 GOLPH3LQ9H4A5 285 aa5.58□□□□□ -1.52
VTI1B-202ENST00000553619 ACSS3Q9H6R3 686 aa5.58□□□□□ -1.52
VTI1B-202ENST00000553619 MLXIPQ9HAP2 919 aa5.58□□□□□ -1.52
VTI1B-202ENST00000553619 PIDD1Q9HB75 910 aa5.58□□□□□ -1.52
VTI1B-202ENST00000553619 LRRC4CQ9HCJ2 640 aa5.58□□□□□ -1.52
VTI1B-202ENST00000553619 AGO4Q9HCK5 861 aaKnown RBP5.58□□□□□ -1.52
VTI1B-202ENST00000553619 VTA1Q9NP79 307 aa5.58□□□□□ -1.52
VTI1B-202ENST00000553619 DISC1Q9NRI5 854 aa5.58□□□□□ -1.52
VTI1B-202ENST00000553619 SLC9A2Q9UBY0 812 aa5.58□□□□□ -1.52
VTI1B-202ENST00000553619 KCNG1Q9UIX4 513 aa5.58□□□□□ -1.52
VTI1B-202ENST00000553619 DCTN4Q9UJW0 460 aa5.58□□□□□ -1.52
VTI1B-202ENST00000553619 SAMM50Q9Y512 469 aa5.58□□□□□ -1.52
VTI1B-202ENST00000553619 PCDHA10Q9Y5I2 948 aa5.58□□□□□ -1.52
VTI1B-202ENST00000553619 MRVI1Q9Y6F6 885 aa5.58□□□□□ -1.52
VTI1B-202ENST00000553619 KIAA1217Q5T5P2 1943 aa5.58□□□□□ -1.52
VTI1B-202ENST00000553619 ADGRA2Q96PE1 1338 aa5.57□□□□□ -1.52
VTI1B-202ENST00000553619 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.57□□□□□ -1.52
VTI1B-202ENST00000553619 GPR182O15218 404 aa5.57□□□□□ -1.52
VTI1B-202ENST00000553619 DYNC1LI2O43237 492 aaPredicted RBP5.57□□□□□ -1.52
VTI1B-202ENST00000553619 PEX10O60683 326 aa5.57□□□□□ -1.52
VTI1B-202ENST00000553619 AOC2O75106 756 aa5.57□□□□□ -1.52
VTI1B-202ENST00000553619 PGK2P07205 417 aa5.57□□□□□ -1.52
VTI1B-202ENST00000553619 TXNP10599 105 aaKnown RBP5.57□□□□□ -1.52
VTI1B-202ENST00000553619 XRCC5P13010 732 aaKnown RBP5.57□□□□□ -1.52
VTI1B-202ENST00000553619 MAPK1P28482 360 aa5.57□□□□□ -1.52
VTI1B-202ENST00000553619 CDC25AP30304 524 aa5.57□□□□□ -1.52
VTI1B-202ENST00000553619 PPP1R2P41236 205 aa5.57□□□□□ -1.52
VTI1B-202ENST00000553619 PSMC4P43686 418 aa5.57□□□□□ -1.52
VTI1B-202ENST00000553619 PRMT2P55345 433 aa5.57□□□□□ -1.52
VTI1B-202ENST00000553619 ZNF445P59923 1031 aa5.57□□□□□ -1.52
VTI1B-202ENST00000553619 PSMC5P62195 406 aa5.57□□□□□ -1.52
VTI1B-202ENST00000553619 GRIN1Q05586 938 aa5.57□□□□□ -1.52
VTI1B-202ENST00000553619 PSMD2Q13200 908 aa5.57□□□□□ -1.52
VTI1B-202ENST00000553619 KARSQ15046 597 aaKnown RBP5.57□□□□□ -1.52
VTI1B-202ENST00000553619 POSTNQ15063 836 aa5.57□□□□□ -1.52
VTI1B-202ENST00000553619 ECM1Q16610 540 aa5.57□□□□□ -1.52
VTI1B-202ENST00000553619 ZSCAN23Q3MJ62 389 aa5.57□□□□□ -1.52
VTI1B-202ENST00000553619 LONRF3Q496Y0 759 aa5.57□□□□□ -1.52
VTI1B-202ENST00000553619 BRDTQ58F21 947 aaPredicted RBP5.57□□□□□ -1.52
VTI1B-202ENST00000553619 MFSD14CQ5VZR4 134 aa5.57□□□□□ -1.52
VTI1B-202ENST00000553619 FAM160B1Q5W0V3 765 aa5.57□□□□□ -1.52
VTI1B-202ENST00000553619 OLFML2BQ68BL8 750 aa5.57□□□□□ -1.52
VTI1B-202ENST00000553619 ARMCX2Q7L311 632 aa5.57□□□□□ -1.52
VTI1B-202ENST00000553619 CATSPER3Q86XQ3 398 aa5.57□□□□□ -1.52
VTI1B-202ENST00000553619 TPH2Q8IWU9 490 aa5.57□□□□□ -1.52
VTI1B-202ENST00000553619 DHX37Q8IY37 1157 aaKnown RBP5.57□□□□□ -1.52
VTI1B-202ENST00000553619 EXOC8Q8IYI6 725 aa5.57□□□□□ -1.52
VTI1B-202ENST00000553619 TRIML1Q8N9V2 468 aa5.57□□□□□ -1.52
VTI1B-202ENST00000553619 FLCNQ8NFG4 579 aa5.57□□□□□ -1.52
VTI1B-202ENST00000553619 SCFD2Q8WU76 684 aa5.57□□□□□ -1.52
VTI1B-202ENST00000553619 SEPT1Q8WYJ6 367 aa5.57□□□□□ -1.52
VTI1B-202ENST00000553619 LARP4BQ92615 738 aaKnown RBP5.57□□□□□ -1.52
VTI1B-202ENST00000553619 ATP6V0A1Q93050 837 aa5.57□□□□□ -1.52
VTI1B-202ENST00000553619 SMARCE1Q969G3 411 aa5.57□□□□□ -1.52
VTI1B-202ENST00000553619 LENG9Q96B70 501 aa5.57□□□□□ -1.52
VTI1B-202ENST00000553619 ALKBH8Q96BT7 664 aaKnown RBP5.57□□□□□ -1.52
VTI1B-202ENST00000553619 ERO1AQ96HE7 468 aa5.57□□□□□ -1.52
VTI1B-202ENST00000553619 MAML3Q96JK9 1138 aa5.57□□□□□ -1.52
VTI1B-202ENST00000553619 GSDMAQ96QA5 445 aa5.57□□□□□ -1.52
VTI1B-202ENST00000553619 HSD17B14Q9BPX1 270 aa5.57□□□□□ -1.52
VTI1B-202ENST00000553619 EIF2AK1Q9BQI3 630 aaKnown RBP5.57□□□□□ -1.52
VTI1B-202ENST00000553619 TINF2Q9BSI4 451 aa5.57□□□□□ -1.52
VTI1B-202ENST00000553619 RBCK1Q9BYM8 510 aa5.57□□□□□ -1.52
VTI1B-202ENST00000553619 NAT10Q9H0A0 1025 aaKnown RBP5.57□□□□□ -1.52
VTI1B-202ENST00000553619 GZF1Q9H116 711 aaPredicted RBP5.57□□□□□ -1.52
VTI1B-202ENST00000553619 TSPY26PQ9H489 355 aa5.57□□□□□ -1.52
VTI1B-202ENST00000553619 ZSWIM4Q9H7M6 989 aa5.57□□□□□ -1.52
VTI1B-202ENST00000553619 NRBP2Q9NSY0 501 aa5.57□□□□□ -1.52
VTI1B-202ENST00000553619 ANO10Q9NW15 660 aa5.57□□□□□ -1.52
VTI1B-202ENST00000553619 RMND1Q9NWS8 449 aa5.57□□□□□ -1.52
VTI1B-202ENST00000553619 RNF186Q9NXI6 227 aa5.57□□□□□ -1.52
VTI1B-202ENST00000553619 SAGE1Q9NXZ1 904 aa5.57□□□□□ -1.52
VTI1B-202ENST00000553619 KCND2Q9NZV8 630 aa5.57□□□□□ -1.52
VTI1B-202ENST00000553619 ZC3H7BQ9UGR2 993 aaKnown RBP5.57□□□□□ -1.52
VTI1B-202ENST00000553619 NRBP1Q9UHY1 535 aa5.57□□□□□ -1.52
VTI1B-202ENST00000553619 PLXNA1Q9UIW2 1896 aa5.57□□□□□ -1.52
VTI1B-202ENST00000553619 PLXNB2O15031 1838 aa5.57□□□□□ -1.52
VTI1B-202ENST00000553619 DOCK3Q8IZD9 2030 aa5.57□□□□□ -1.52
VTI1B-202ENST00000553619 MYH9P35579 1960 aaKnown RBP5.56□□□□□ -1.52
VTI1B-202ENST00000553619 LOXHD1Q8IVV2 1947 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms