RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 LINC00528Q8N1L1 170 aa7.93□□□□□ -1.14
ATXN3-221ENST00000553498 SLC35F6Q8N357 371 aa7.93□□□□□ -1.14
ATXN3-221ENST00000553498 GPR161Q8N6U8 529 aaKnown RBP7.93□□□□□ -1.14
ATXN3-221ENST00000553498 C2orf69Q8N8R5 385 aa7.93□□□□□ -1.14
ATXN3-221ENST00000553498 RABGGTAQ92696 567 aa7.93□□□□□ -1.14
ATXN3-221ENST00000553498 GOLGA1Q92805 767 aa7.93□□□□□ -1.14
ATXN3-221ENST00000553498 MFSD14AQ96MC6 490 aa7.93□□□□□ -1.14
ATXN3-221ENST00000553498 NOX5Q96PH1 765 aa7.93□□□□□ -1.14
ATXN3-221ENST00000553498 INTS2Q9H0H0 1204 aaKnown RBP7.93□□□□□ -1.14
ATXN3-221ENST00000553498 C2orf40Q9H1Z8 148 aa7.93□□□□□ -1.14
ATXN3-221ENST00000553498 PDCL3Q9H2J4 239 aa7.93□□□□□ -1.14
ATXN3-221ENST00000553498 SMARCAD1Q9H4L7 1026 aa7.93□□□□□ -1.14
ATXN3-221ENST00000553498 VTA1Q9NP79 307 aa7.93□□□□□ -1.14
ATXN3-221ENST00000553498 NLRC4Q9NPP4 1024 aa7.93□□□□□ -1.14
ATXN3-221ENST00000553498 PGPEP1Q9NXJ5 209 aa7.93□□□□□ -1.14
ATXN3-221ENST00000553498 DDX41Q9UJV9 622 aaKnown RBP7.93□□□□□ -1.14
ATXN3-221ENST00000553498 GUCA1BQ9UMX6 200 aa7.93□□□□□ -1.14
ATXN3-221ENST00000553498 COQ4Q9Y3A0 265 aa7.93□□□□□ -1.14
ATXN3-221ENST00000553498 STYXL1Q9Y6J8 313 aa7.93□□□□□ -1.14
ATXN3-221ENST00000553498 PHIPQ8WWQ0 1821 aa7.93□□□□□ -1.14
ATXN3-221ENST00000553498 ATAD5Q96QE3 1844 aa7.93□□□□□ -1.14
ATXN3-221ENST00000553498 MYH7BA7E2Y1 1941 aa7.93□□□□□ -1.14
ATXN3-221ENST00000553498 DICER1Q9UPY3 1922 aaKnown RBP7.93□□□□□ -1.14
ATXN3-221ENST00000553498 PAPPA2Q9BXP8 1791 aa7.92□□□□□ -1.14
ATXN3-221ENST00000553498 GOLGB1Q14789 3259 aaKnown RBP7.92□□□□□ -1.14
ATXN3-221ENST00000553498 A0A0A6YYK5 440 aaPredicted RBP7.92□□□□□ -1.14
ATXN3-221ENST00000553498 GSTTP1A0A1W2PQM5 241 aa7.92□□□□□ -1.14
ATXN3-221ENST00000553498 NOP56O00567 594 aaKnown RBP7.92□□□□□ -1.14
ATXN3-221ENST00000553498 ASAP2O43150 1006 aa7.92□□□□□ -1.14
ATXN3-221ENST00000553498 EXTL3O43909 919 aa7.92□□□□□ -1.14
ATXN3-221ENST00000553498 TLR2O60603 784 aa7.92□□□□□ -1.14
ATXN3-221ENST00000553498 TADA3O75528 432 aa7.92□□□□□ -1.14
ATXN3-221ENST00000553498 GGPS1O95749 300 aa7.92□□□□□ -1.14
ATXN3-221ENST00000553498 TCP1P17987 556 aaKnown RBP7.92□□□□□ -1.14
ATXN3-221ENST00000553498 SLC9A1P19634 815 aa7.92□□□□□ -1.14
ATXN3-221ENST00000553498 MCM3P25205 808 aa7.92□□□□□ -1.14
ATXN3-221ENST00000553498 SOX5P35711 763 aa7.92□□□□□ -1.14
ATXN3-221ENST00000553498 CLDN10P78369 228 aa7.92□□□□□ -1.14
ATXN3-221ENST00000553498 AMPD2Q01433 879 aa7.92□□□□□ -1.14
ATXN3-221ENST00000553498 POU5F1Q01860 360 aaKnown RBP7.92□□□□□ -1.14
ATXN3-221ENST00000553498 ITIH3Q06033 890 aa7.92□□□□□ -1.14
ATXN3-221ENST00000553498 POU5F1BQ06416 359 aa7.92□□□□□ -1.14
ATXN3-221ENST00000553498 GRM1Q13255 1194 aa7.92□□□□□ -1.14
ATXN3-221ENST00000553498 LAMC2Q13753 1193 aa7.92□□□□□ -1.14
ATXN3-221ENST00000553498 NAB2Q15742 525 aa7.92□□□□□ -1.14
ATXN3-221ENST00000553498 SNRNP35Q16560 246 aaKnown RBP7.92□□□□□ -1.14
ATXN3-221ENST00000553498 KRT39Q6A163 491 aa7.92□□□□□ -1.14
ATXN3-221ENST00000553498 CCDC62Q6P9F0 684 aa7.92□□□□□ -1.14
ATXN3-221ENST00000553498 ZPBP2Q6X784 338 aa7.92□□□□□ -1.14
ATXN3-221ENST00000553498 MAEAQ7L5Y9 396 aa7.92□□□□□ -1.14
ATXN3-221ENST00000553498 DHX37Q8IY37 1157 aaKnown RBP7.92□□□□□ -1.14
ATXN3-221ENST00000553498 GPD1LQ8N335 351 aa7.92□□□□□ -1.14
ATXN3-221ENST00000553498 KDF1Q8NAX2 398 aaPredicted RBP7.92□□□□□ -1.14
ATXN3-221ENST00000553498 ZNF784Q8NCA9 323 aaPredicted RBP7.92□□□□□ -1.14
ATXN3-221ENST00000553498 DEPTORQ8TB45 409 aa7.92□□□□□ -1.14
ATXN3-221ENST00000553498 ATP8B4Q8TF62 1192 aa7.92□□□□□ -1.14
ATXN3-221ENST00000553498 LMBR1Q8WVP7 490 aa7.92□□□□□ -1.14
ATXN3-221ENST00000553498 PARK7Q99497 189 aaKnown RBP7.92□□□□□ -1.14
ATXN3-221ENST00000553498 CRACR2AQ9BSW2 395 aa7.92□□□□□ -1.14
ATXN3-221ENST00000553498 POLR3FQ9H1D9 316 aaPredicted RBP7.92□□□□□ -1.14
ATXN3-221ENST00000553498 GBA2Q9HCG7 927 aaPredicted RBP7.92□□□□□ -1.14
ATXN3-221ENST00000553498 TMEM8AQ9HCN3 771 aa7.92□□□□□ -1.14
ATXN3-221ENST00000553498 SIX2Q9NPC8 291 aa7.92□□□□□ -1.14
ATXN3-221ENST00000553498 XPNPEP1Q9NQW7 623 aa7.92□□□□□ -1.14
ATXN3-221ENST00000553498 SLC5A4Q9NY91 659 aa7.92□□□□□ -1.14
ATXN3-221ENST00000553498 SAR1BQ9Y6B6 198 aa7.92□□□□□ -1.14
ATXN3-221ENST00000553498 IVNS1ABPQ9Y6Y0 642 aa7.92□□□□□ -1.14
ATXN3-221ENST00000553498 LOC285556D6RIA3 1793 aa7.92□□□□□ -1.14
ATXN3-221ENST00000553498 RBBP6Q7Z6E9 1792 aaKnown RBP7.92□□□□□ -1.14
ATXN3-221ENST00000553498 CCL15-CCL14A0A0B4J2E2 113 aa7.91□□□□□ -1.14
ATXN3-221ENST00000553498 RBM47A0AV96 593 aaKnown RBP7.91□□□□□ -1.14
ATXN3-221ENST00000553498 CTAGE15A4D2H0 777 aa7.91□□□□□ -1.14
ATXN3-221ENST00000553498 ZNF233A6NK53 670 aa7.91□□□□□ -1.14
ATXN3-221ENST00000553498 F8VZ95 297 aa7.91□□□□□ -1.14
ATXN3-221ENST00000553498 K7ERI5 159 aa7.91□□□□□ -1.14
ATXN3-221ENST00000553498 PDHXO00330 501 aa7.91□□□□□ -1.14
ATXN3-221ENST00000553498 CES2O00748 559 aa7.91□□□□□ -1.14
ATXN3-221ENST00000553498 ZNF263O14978 683 aa7.91□□□□□ -1.14
ATXN3-221ENST00000553498 HNRNPDLO14979 420 aaKnown RBP7.91□□□□□ -1.14
ATXN3-221ENST00000553498 FANCGO15287 622 aa7.91□□□□□ -1.14
ATXN3-221ENST00000553498 ATP8B1O43520 1251 aa7.91□□□□□ -1.14
ATXN3-221ENST00000553498 HBP1O60381 514 aa7.91□□□□□ -1.14
ATXN3-221ENST00000553498 CTAGE8P0CG41 777 aa7.91□□□□□ -1.14
ATXN3-221ENST00000553498 MAPK4P31152 587 aa7.91□□□□□ -1.14
ATXN3-221ENST00000553498 TCF7P36402 384 aaPredicted RBP7.91□□□□□ -1.14
ATXN3-221ENST00000553498 LIG4P49917 911 aa7.91□□□□□ -1.14
ATXN3-221ENST00000553498 MXI1P50539 228 aa7.91□□□□□ -1.14
ATXN3-221ENST00000553498 GPC3P51654 580 aa7.91□□□□□ -1.14
ATXN3-221ENST00000553498 MFAP3P55082 362 aa7.91□□□□□ -1.14
ATXN3-221ENST00000553498 CHMP4BP1P59074 171 aa7.91□□□□□ -1.14
ATXN3-221ENST00000553498 TFDP1Q14186 410 aa7.91□□□□□ -1.14
ATXN3-221ENST00000553498 KIF22Q14807 665 aa7.91□□□□□ -1.14
ATXN3-221ENST00000553498 SURF1Q15526 300 aa7.91□□□□□ -1.14
ATXN3-221ENST00000553498 CCL15Q16663 113 aa7.91□□□□□ -1.14
ATXN3-221ENST00000553498 ZNF792Q3KQV3 632 aa7.91□□□□□ -1.14
ATXN3-221ENST00000553498 MTERF2Q49AM1 385 aa7.91□□□□□ -1.14
ATXN3-221ENST00000553498 EPC2Q52LR7 807 aa7.91□□□□□ -1.14
ATXN3-221ENST00000553498 PPP1R2P3Q6NXS1 205 aa7.91□□□□□ -1.14
ATXN3-221ENST00000553498 MAMDC4Q6UXC1 1216 aa7.91□□□□□ -1.14
ATXN3-221ENST00000553498 RSRC2Q7L4I2 434 aaKnown RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms