RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 PLXNA4Q9HCM2 1894 aa20.2■□□□□ 0.82
CPSF2-202ENST00000553427 ATG2AQ2TAZ0 1938 aa20.2■□□□□ 0.82
CPSF2-202ENST00000553427 PTGESO14684 152 aa20.2■□□□□ 0.82
CPSF2-202ENST00000553427 FSCN2O14926 492 aa20.2■□□□□ 0.82
CPSF2-202ENST00000553427 HNRNPDLO14979 420 aaKnown RBP20.2■□□□□ 0.82
CPSF2-202ENST00000553427 CLDN3O15551 220 aa20.2■□□□□ 0.82
CPSF2-202ENST00000553427 ACTN4O43707 911 aaKnown RBP20.2■□□□□ 0.82
CPSF2-202ENST00000553427 IDEP14735 1019 aa20.2■□□□□ 0.82
CPSF2-202ENST00000553427 LIG4P49917 911 aa20.2■□□□□ 0.82
CPSF2-202ENST00000553427 KYAT1Q16773 422 aa20.2■□□□□ 0.82
CPSF2-202ENST00000553427 XKR4Q5GH76 650 aa20.2■□□□□ 0.82
CPSF2-202ENST00000553427 HERC4Q5GLZ8 1057 aaPredicted RBP20.2■□□□□ 0.82
CPSF2-202ENST00000553427 CEP57L1Q8IYX8 460 aa20.2■□□□□ 0.82
CPSF2-202ENST00000553427 PPP2R3CQ969Q6 453 aa20.2■□□□□ 0.82
CPSF2-202ENST00000553427 TMEM169Q96HH4 297 aa20.2■□□□□ 0.82
CPSF2-202ENST00000553427 TCHPQ9BT92 498 aa20.2■□□□□ 0.82
CPSF2-202ENST00000553427 GBP3Q9H0R5 595 aa20.2■□□□□ 0.82
CPSF2-202ENST00000553427 MRPL44Q9H9J2 332 aaKnown RBP20.2■□□□□ 0.82
CPSF2-202ENST00000553427 KLK14Q9P0G3 267 aa20.2■□□□□ 0.82
CPSF2-202ENST00000553427 ANKFY1Q9P2R3 1169 aa20.2■□□□□ 0.82
CPSF2-202ENST00000553427 TCHHQ07283 1943 aa20.19■□□□□ 0.82
CPSF2-202ENST00000553427 ALDH2P05091 517 aa20.19■□□□□ 0.82
CPSF2-202ENST00000553427 YARSP54577 528 aaKnown RBP20.19■□□□□ 0.82
CPSF2-202ENST00000553427 COASYQ13057 564 aa20.19■□□□□ 0.82
CPSF2-202ENST00000553427 TCEAL5Q5H9L2 206 aa20.19■□□□□ 0.82
CPSF2-202ENST00000553427 TMEM173Q86WV6 379 aaPredicted RBP20.19■□□□□ 0.82
CPSF2-202ENST00000553427 CEP120Q8N960 986 aa20.19■□□□□ 0.82
CPSF2-202ENST00000553427 PPM1EQ8WY54 764 aa20.19■□□□□ 0.82
CPSF2-202ENST00000553427 STAMQ92783 540 aa20.19■□□□□ 0.82
CPSF2-202ENST00000553427 ZBTB45Q96K62 511 aaPredicted RBP20.19■□□□□ 0.82
CPSF2-202ENST00000553427 NGRNQ9NPE2 291 aaKnown RBP20.19■□□□□ 0.82
CPSF2-202ENST00000553427 COG5Q9UP83 839 aa20.19■□□□□ 0.82
CPSF2-202ENST00000553427 GDAQ9Y2T3 454 aa20.19■□□□□ 0.82
CPSF2-202ENST00000553427 PCDHB13Q9Y5F0 798 aa20.19■□□□□ 0.82
CPSF2-202ENST00000553427 MYO7AQ13402 2215 aa20.18■□□□□ 0.82
CPSF2-202ENST00000553427 UNC80Q8N2C7 3258 aa20.18■□□□□ 0.82
CPSF2-202ENST00000553427 A0A1B0GVL5 298 aa20.18■□□□□ 0.82
CPSF2-202ENST00000553427 NCK2O43639 380 aa20.18■□□□□ 0.82
CPSF2-202ENST00000553427 NR1I2O75469 434 aa20.18■□□□□ 0.82
CPSF2-202ENST00000553427 MYL1P05976 194 aa20.18■□□□□ 0.82
CPSF2-202ENST00000553427 IRS1P35568 1242 aa20.18■□□□□ 0.82
CPSF2-202ENST00000553427 ASIC1P78348 528 aa20.18■□□□□ 0.82
CPSF2-202ENST00000553427 TUSC3Q13454 348 aa20.18■□□□□ 0.82
CPSF2-202ENST00000553427 NAB2Q15742 525 aa20.18■□□□□ 0.82
CPSF2-202ENST00000553427 ZC2HC1CQ53FD0 456 aaPredicted RBP20.18■□□□□ 0.82
CPSF2-202ENST00000553427 L1TD1Q5T7N2 865 aaKnown RBP20.18■□□□□ 0.82
CPSF2-202ENST00000553427 SLC39A4Q6P5W5 647 aa20.18■□□□□ 0.82
CPSF2-202ENST00000553427 ALKAL1Q6UXT8 129 aa20.18■□□□□ 0.82
CPSF2-202ENST00000553427 UNC13DQ70J99 1090 aa20.18■□□□□ 0.82
CPSF2-202ENST00000553427 ZBTB33Q86T24 672 aa20.18■□□□□ 0.82
CPSF2-202ENST00000553427 DDX53Q86TM3 631 aaKnown RBP20.18■□□□□ 0.82
CPSF2-202ENST00000553427 BCL7CQ8WUZ0 217 aaPredicted RBP20.18■□□□□ 0.82
CPSF2-202ENST00000553427 SNX27Q96L92 541 aa20.18■□□□□ 0.82
CPSF2-202ENST00000553427 HAPLN2Q9GZV7 340 aa20.18■□□□□ 0.82
CPSF2-202ENST00000553427 GDPD2Q9HCC8 539 aa20.18■□□□□ 0.82
CPSF2-202ENST00000553427 THEGQ9P2T0 379 aa20.18■□□□□ 0.82
CPSF2-202ENST00000553427 FAN1Q9Y2M0 1017 aa20.18■□□□□ 0.82
CPSF2-202ENST00000553427 STYXL1Q9Y6J8 313 aa20.18■□□□□ 0.82
CPSF2-202ENST00000553427 A0A0B4J269 797 aa20.17■□□□□ 0.82
CPSF2-202ENST00000553427 FSD2A1L4K1 749 aa20.17■□□□□ 0.82
CPSF2-202ENST00000553427 NT5C1B-RDH14C9J2C7 533 aa20.17■□□□□ 0.82
CPSF2-202ENST00000553427 NRP1O14786 923 aa20.17■□□□□ 0.82
CPSF2-202ENST00000553427 FAM189A1O60320 539 aa20.17■□□□□ 0.82
CPSF2-202ENST00000553427 THP07101 528 aa20.17■□□□□ 0.82
CPSF2-202ENST00000553427 KCNE1P15382 129 aa20.17■□□□□ 0.82
CPSF2-202ENST00000553427 SYKP43405 635 aa20.17■□□□□ 0.82
CPSF2-202ENST00000553427 NDUFA8P51970 172 aa20.17■□□□□ 0.82
CPSF2-202ENST00000553427 EHHADHQ08426 723 aa20.17■□□□□ 0.82
CPSF2-202ENST00000553427 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.17■□□□□ 0.82
CPSF2-202ENST00000553427 FSIP1Q8NA03 581 aa20.17■□□□□ 0.82
CPSF2-202ENST00000553427 ACAP3Q96P50 834 aa20.17■□□□□ 0.82
CPSF2-202ENST00000553427 PPP1R10Q96QC0 940 aaKnown RBP20.17■□□□□ 0.82
CPSF2-202ENST00000553427 MARCH5Q9NX47 278 aa20.17■□□□□ 0.82
CPSF2-202ENST00000553427 CNTN3Q9P232 1028 aa20.17■□□□□ 0.82
CPSF2-202ENST00000553427 SERTAD1Q9UHV2 236 aa20.17■□□□□ 0.82
CPSF2-202ENST00000553427 EXOC7Q9UPT5 735 aa20.17■□□□□ 0.82
CPSF2-202ENST00000553427 TDRD15B5MCY1 1934 aaKnown RBP20.16■□□□□ 0.82
CPSF2-202ENST00000553427 PVALEFA0A1B0GWK0 134 aa20.16■□□□□ 0.82
CPSF2-202ENST00000553427 OGTO15294 1046 aa20.16■□□□□ 0.82
CPSF2-202ENST00000553427 GCNT3O95395 438 aa20.16■□□□□ 0.82
CPSF2-202ENST00000553427 EFEMP2O95967 443 aa20.16■□□□□ 0.82
CPSF2-202ENST00000553427 CLTAP09496 248 aa20.16■□□□□ 0.82
CPSF2-202ENST00000553427 CASP5P51878 434 aa20.16■□□□□ 0.82
CPSF2-202ENST00000553427 ERVFC1P60507 584 aa20.16■□□□□ 0.82
CPSF2-202ENST00000553427 SLFN12LQ6IEE8 588 aa20.16■□□□□ 0.82
CPSF2-202ENST00000553427 STXBP4Q6ZWJ1 553 aa20.16■□□□□ 0.82
CPSF2-202ENST00000553427 PAGE5Q96GU1 130 aa20.16■□□□□ 0.82
CPSF2-202ENST00000553427 ACCSQ96QU6 501 aa20.16■□□□□ 0.82
CPSF2-202ENST00000553427 TCF25Q9BQ70 676 aa20.16■□□□□ 0.82
CPSF2-202ENST00000553427 ZBP1Q9H171 429 aa20.16■□□□□ 0.82
CPSF2-202ENST00000553427 PLEKHA5Q9HAU0 1116 aa20.16■□□□□ 0.82
CPSF2-202ENST00000553427 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.16■□□□□ 0.82
CPSF2-202ENST00000553427 BRWD1Q9NSI6 2320 aa20.16■□□□□ 0.82
CPSF2-202ENST00000553427 XIRP2A4UGR9 3374 aa20.15■□□□□ 0.82
CPSF2-202ENST00000553427 EIF3DO15371 548 aaKnown RBP eCLIP20.15■□□□□ 0.82
CPSF2-202ENST00000553427 MYBP10242 640 aa20.15■□□□□ 0.82
CPSF2-202ENST00000553427 HARSP12081 509 aaKnown RBP20.15■□□□□ 0.82
CPSF2-202ENST00000553427 OR1G1P47890 313 aa20.15■□□□□ 0.82
CPSF2-202ENST00000553427 POU5F1Q01860 360 aaKnown RBP20.15■□□□□ 0.82
CPSF2-202ENST00000553427 HYAL1Q12794 435 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms