RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 CMASQ8NFW8 434 aaPredicted RBP14.06□□□□□ -0.16
LINC00643-202ENST00000553426 SNX29Q8TEQ0 813 aa14.06□□□□□ -0.16
LINC00643-202ENST00000553426 RIN2Q8WYP3 895 aaPredicted RBP14.06□□□□□ -0.16
LINC00643-202ENST00000553426 ASIC4Q96FT7 647 aa14.06□□□□□ -0.16
LINC00643-202ENST00000553426 PLEKHA4Q9H4M7 779 aa14.06□□□□□ -0.16
LINC00643-202ENST00000553426 PDZD7Q9H5P4 517 aa14.06□□□□□ -0.16
LINC00643-202ENST00000553426 CHST7Q9NS84 486 aa14.06□□□□□ -0.16
LINC00643-202ENST00000553426 DDX19AQ9NUU7 478 aaKnown RBP14.06□□□□□ -0.16
LINC00643-202ENST00000553426 SNTG2Q9NY99 539 aa14.06□□□□□ -0.16
LINC00643-202ENST00000553426 DNM3Q9UQ16 869 aa14.06□□□□□ -0.16
LINC00643-202ENST00000553426 SF3B1O75533 1304 aaKnown RBP eCLIP14.06□□□□□ -0.16
LINC00643-202ENST00000553426 CCDC195A0A1B0GUA6 201 aa14.05□□□□□ -0.16
LINC00643-202ENST00000553426 K7ERI5 159 aa14.05□□□□□ -0.16
LINC00643-202ENST00000553426 ASGR2P07307 311 aa14.05□□□□□ -0.16
LINC00643-202ENST00000553426 ELAVL2Q12926 359 aaKnown RBP14.05□□□□□ -0.16
LINC00643-202ENST00000553426 NBR1Q14596 966 aa14.05□□□□□ -0.16
LINC00643-202ENST00000553426 C8orf34Q49A92 452 aa14.05□□□□□ -0.16
LINC00643-202ENST00000553426 DTHD1Q6ZMT9 781 aa14.05□□□□□ -0.16
LINC00643-202ENST00000553426 RNF168Q8IYW5 571 aaPredicted RBP14.05□□□□□ -0.16
LINC00643-202ENST00000553426 C4orf32Q8N8J7 132 aa14.05□□□□□ -0.16
LINC00643-202ENST00000553426 IGSF22Q8N9C0 903 aa14.05□□□□□ -0.16
LINC00643-202ENST00000553426 BSNDQ8WZ55 320 aa14.05□□□□□ -0.16
LINC00643-202ENST00000553426 KIF2CQ99661 725 aa14.05□□□□□ -0.16
LINC00643-202ENST00000553426 IRF2BPLQ9H1B7 796 aa14.05□□□□□ -0.16
LINC00643-202ENST00000553426 PIDD1Q9HB75 910 aa14.05□□□□□ -0.16
LINC00643-202ENST00000553426 FNIP2Q9P278 1114 aa14.05□□□□□ -0.16
LINC00643-202ENST00000553426 PHLPP2Q6ZVD8 1323 aa14.05□□□□□ -0.16
LINC00643-202ENST00000553426 TDRD15B5MCY1 1934 aaKnown RBP14.05□□□□□ -0.16
LINC00643-202ENST00000553426 CASTOR2A6NHX0 329 aa14.04□□□□□ -0.16
LINC00643-202ENST00000553426 CCDC169A6NNP5 214 aa14.04□□□□□ -0.16
LINC00643-202ENST00000553426 F8W810 466 aa14.04□□□□□ -0.16
LINC00643-202ENST00000553426 H3BQV1 296 aa14.04□□□□□ -0.16
LINC00643-202ENST00000553426 RECQL4O94761 1208 aa14.04□□□□□ -0.16
LINC00643-202ENST00000553426 BRD1O95696 1058 aa14.04□□□□□ -0.16
LINC00643-202ENST00000553426 EFEMP2O95967 443 aa14.04□□□□□ -0.16
LINC00643-202ENST00000553426 AVPR2P30518 371 aa14.04□□□□□ -0.16
LINC00643-202ENST00000553426 PRPHP41219 470 aa14.04□□□□□ -0.16
LINC00643-202ENST00000553426 NUBP1P53384 320 aa14.04□□□□□ -0.16
LINC00643-202ENST00000553426 DMP1Q13316 513 aaPredicted RBP14.04□□□□□ -0.16
LINC00643-202ENST00000553426 RILPL1Q5EBL4 403 aa14.04□□□□□ -0.16
LINC00643-202ENST00000553426 ATF7IP2Q5U623 682 aa14.04□□□□□ -0.16
LINC00643-202ENST00000553426 PDXDC1Q6P996 788 aa14.04□□□□□ -0.16
LINC00643-202ENST00000553426 PALB2Q86YC2 1186 aa14.04□□□□□ -0.16
LINC00643-202ENST00000553426 PRSS33Q8NF86 280 aa14.04□□□□□ -0.16
LINC00643-202ENST00000553426 B3GALT6Q96L58 329 aa14.04□□□□□ -0.16
LINC00643-202ENST00000553426 RHOBTB2Q9BYZ6 727 aa14.04□□□□□ -0.16
LINC00643-202ENST00000553426 GPR62Q9BZJ7 368 aa14.04□□□□□ -0.16
LINC00643-202ENST00000553426 CCDC113Q9H0I3 377 aa14.04□□□□□ -0.16
LINC00643-202ENST00000553426 MFSD1Q9H3U5 465 aa14.04□□□□□ -0.16
LINC00643-202ENST00000553426 KCNG1Q9UIX4 513 aa14.04□□□□□ -0.16
LINC00643-202ENST00000553426 GDAQ9Y2T3 454 aa14.04□□□□□ -0.16
LINC00643-202ENST00000553426 PCDHB6Q9Y5E3 794 aa14.04□□□□□ -0.16
LINC00643-202ENST00000553426 GBP2P32456 591 aaPredicted RBP14.03□□□□□ -0.16
LINC00643-202ENST00000553426 TOB1P50616 345 aaPredicted RBP14.03□□□□□ -0.16
LINC00643-202ENST00000553426 YARSP54577 528 aaKnown RBP14.03□□□□□ -0.16
LINC00643-202ENST00000553426 TDGQ13569 410 aa14.03□□□□□ -0.16
LINC00643-202ENST00000553426 ECM1Q16610 540 aa14.03□□□□□ -0.16
LINC00643-202ENST00000553426 IER5LQ5T953 404 aa14.03□□□□□ -0.16
LINC00643-202ENST00000553426 FAM171A1Q5VUB5 890 aa14.03□□□□□ -0.16
LINC00643-202ENST00000553426 CEP57Q86XR8 500 aa14.03□□□□□ -0.16
LINC00643-202ENST00000553426 GLYCTKQ8IVS8 523 aa14.03□□□□□ -0.16
LINC00643-202ENST00000553426 SMG7Q92540 1137 aaKnown RBP14.03□□□□□ -0.16
LINC00643-202ENST00000553426 RABGGTAQ92696 567 aa14.03□□□□□ -0.16
LINC00643-202ENST00000553426 DRC1Q96MC2 740 aa14.03□□□□□ -0.16
LINC00643-202ENST00000553426 TTPALQ9BTX7 342 aa14.03□□□□□ -0.16
LINC00643-202ENST00000553426 KIFC3Q9BVG8 833 aa14.03□□□□□ -0.16
LINC00643-202ENST00000553426 POLD4Q9HCU8 107 aa14.03□□□□□ -0.16
LINC00643-202ENST00000553426 WDR6Q9NNW5 1121 aaKnown RBP14.03□□□□□ -0.16
LINC00643-202ENST00000553426 ZDHHC7Q9NXF8 308 aa14.03□□□□□ -0.16
LINC00643-202ENST00000553426 IGSF9Q9P2J2 1179 aa14.03□□□□□ -0.16
LINC00643-202ENST00000553426 ZDBF2Q9HCK1 2354 aa14.03□□□□□ -0.16
LINC00643-202ENST00000553426 TTLL13PA6NNM8 815 aa14.02□□□□□ -0.17
LINC00643-202ENST00000553426 TGM5O43548 720 aa14.02□□□□□ -0.17
LINC00643-202ENST00000553426 RFPL2O75678 378 aa14.02□□□□□ -0.17
LINC00643-202ENST00000553426 SPATA31D3P0C874 917 aa14.02□□□□□ -0.17
LINC00643-202ENST00000553426 PEX3P56589 373 aa14.02□□□□□ -0.17
LINC00643-202ENST00000553426 ZRSR1Q15695 479 aaKnown RBP14.02□□□□□ -0.17
LINC00643-202ENST00000553426 LIN9Q5TKA1 542 aa14.02□□□□□ -0.17
LINC00643-202ENST00000553426 SPATA31D4Q6ZUB0 917 aa14.02□□□□□ -0.17
LINC00643-202ENST00000553426 HASPINQ8TF76 798 aa14.02□□□□□ -0.17
LINC00643-202ENST00000553426 CDK5RAP3Q96JB5 506 aa14.02□□□□□ -0.17
LINC00643-202ENST00000553426 TIPINQ9BVW5 301 aa14.02□□□□□ -0.17
LINC00643-202ENST00000553426 C17orf75Q9HAS0 396 aa14.02□□□□□ -0.17
LINC00643-202ENST00000553426 TOPORSQ9NS56 1045 aaPredicted RBP14.02□□□□□ -0.17
LINC00643-202ENST00000553426 TNFSF13BQ9Y275 285 aa14.02□□□□□ -0.17
LINC00643-202ENST00000553426 RBM19Q9Y4C8 960 aaKnown RBP14.02□□□□□ -0.17
LINC00643-202ENST00000553426 CLUHO75153 1309 aa14.01□□□□□ -0.17
LINC00643-202ENST00000553426 E9PMD0 336 aa14.01□□□□□ -0.17
LINC00643-202ENST00000553426 PTGESO14684 152 aa14.01□□□□□ -0.17
LINC00643-202ENST00000553426 TRAPPC3O43617 180 aa14.01□□□□□ -0.17
LINC00643-202ENST00000553426 KIF4AO95239 1232 aa14.01□□□□□ -0.17
LINC00643-202ENST00000553426 MYBP10242 640 aa14.01□□□□□ -0.17
LINC00643-202ENST00000553426 NPTX2P47972 431 aa14.01□□□□□ -0.17
LINC00643-202ENST00000553426 MCM2P49736 904 aa14.01□□□□□ -0.17
LINC00643-202ENST00000553426 VCPP55072 806 aaKnown RBP14.01□□□□□ -0.17
LINC00643-202ENST00000553426 PSMD5Q16401 504 aa14.01□□□□□ -0.17
LINC00643-202ENST00000553426 NT5DC1Q5TFE4 455 aa14.01□□□□□ -0.17
LINC00643-202ENST00000553426 EEF1DP3Q658K8 133 aa14.01□□□□□ -0.17
LINC00643-202ENST00000553426 PRSS55Q6UWB4 352 aaPredicted RBP14.01□□□□□ -0.17
LINC00643-202ENST00000553426 KCTD17Q8N5Z5 321 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms