RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 MRPS17Q9Y2R5 130 aaKnown RBP12.73□□□□□ -0.37
SUPT16H-202ENST00000552829 COL4A2P08572 1712 aa12.73□□□□□ -0.37
SUPT16H-202ENST00000552829 ASPMQ8IZT6 3477 aa12.72□□□□□ -0.37
SUPT16H-202ENST00000552829 ECI2O75521 394 aa12.72□□□□□ -0.37
SUPT16H-202ENST00000552829 PSMD10O75832 226 aa12.72□□□□□ -0.37
SUPT16H-202ENST00000552829 PROS1P07225 676 aa12.72□□□□□ -0.37
SUPT16H-202ENST00000552829 ITGA4P13612 1032 aa12.72□□□□□ -0.37
SUPT16H-202ENST00000552829 LIMK1P53667 647 aa12.72□□□□□ -0.37
SUPT16H-202ENST00000552829 DMWDQ09019 674 aa12.72□□□□□ -0.37
SUPT16H-202ENST00000552829 GLYCTKQ8IVS8 523 aa12.72□□□□□ -0.37
SUPT16H-202ENST00000552829 NPAS3Q8IXF0 933 aa12.72□□□□□ -0.37
SUPT16H-202ENST00000552829 GSTCDQ8NEC7 633 aa12.72□□□□□ -0.37
SUPT16H-202ENST00000552829 ZFP42Q96MM3 310 aa12.72□□□□□ -0.37
SUPT16H-202ENST00000552829 NLRP4Q96MN2 994 aa12.72□□□□□ -0.37
SUPT16H-202ENST00000552829 IER2Q9BTL4 223 aa12.72□□□□□ -0.37
SUPT16H-202ENST00000552829 SH2B1Q9NRF2 756 aaPredicted RBP12.72□□□□□ -0.37
SUPT16H-202ENST00000552829 HEBP1Q9NRV9 189 aa12.72□□□□□ -0.37
SUPT16H-202ENST00000552829 KCNH3Q9ULD8 1083 aa12.72□□□□□ -0.37
SUPT16H-202ENST00000552829 IPPQ9Y573 584 aa12.72□□□□□ -0.37
SUPT16H-202ENST00000552829 COL4A3BPQ9Y5P4 624 aa12.72□□□□□ -0.37
SUPT16H-202ENST00000552829 HRO43593 1189 aa12.71□□□□□ -0.37
SUPT16H-202ENST00000552829 FOXD2O60548 495 aaPredicted RBP12.71□□□□□ -0.37
SUPT16H-202ENST00000552829 GAS7O60861 476 aa12.71□□□□□ -0.37
SUPT16H-202ENST00000552829 SCNN1GP51170 649 aa12.71□□□□□ -0.37
SUPT16H-202ENST00000552829 RTN1Q16799 776 aa12.71□□□□□ -0.37
SUPT16H-202ENST00000552829 PFKFB3Q16875 520 aaPredicted RBP12.71□□□□□ -0.37
SUPT16H-202ENST00000552829 PRSS55Q6UWB4 352 aaPredicted RBP12.71□□□□□ -0.37
SUPT16H-202ENST00000552829 ANO5Q75V66 913 aa12.71□□□□□ -0.37
SUPT16H-202ENST00000552829 REXO1Q8N1G1 1221 aaKnown RBP12.71□□□□□ -0.37
SUPT16H-202ENST00000552829 EIF2AQ9BY44 585 aaKnown RBP12.71□□□□□ -0.37
SUPT16H-202ENST00000552829 ADAM28Q9UKQ2 775 aa12.71□□□□□ -0.37
SUPT16H-202ENST00000552829 BRPF3Q9ULD4 1205 aa12.71□□□□□ -0.37
SUPT16H-202ENST00000552829 LAMA1P25391 3075 aa12.71□□□□□ -0.38
SUPT16H-202ENST00000552829 DSPP15924 2871 aaKnown RBP12.7□□□□□ -0.38
SUPT16H-202ENST00000552829 SLC27A2O14975 620 aa12.7□□□□□ -0.38
SUPT16H-202ENST00000552829 CHMP2AO43633 222 aa12.7□□□□□ -0.38
SUPT16H-202ENST00000552829 C8AP07357 584 aa12.7□□□□□ -0.38
SUPT16H-202ENST00000552829 CDC27P30260 824 aa12.7□□□□□ -0.38
SUPT16H-202ENST00000552829 MLH1P40692 756 aa12.7□□□□□ -0.38
SUPT16H-202ENST00000552829 ACAP1Q15027 740 aa12.7□□□□□ -0.38
SUPT16H-202ENST00000552829 RTP2Q5QGT7 225 aa12.7□□□□□ -0.38
SUPT16H-202ENST00000552829 PPM1LQ5SGD2 360 aa12.7□□□□□ -0.38
SUPT16H-202ENST00000552829 LRCH2Q5VUJ6 765 aa12.7□□□□□ -0.38
SUPT16H-202ENST00000552829 SYNE3Q6ZMZ3 975 aa12.7□□□□□ -0.38
SUPT16H-202ENST00000552829 PRPF31Q8WWY3 499 aaKnown RBP12.7□□□□□ -0.38
SUPT16H-202ENST00000552829 PIK3R5Q8WYR1 880 aa12.7□□□□□ -0.38
SUPT16H-202ENST00000552829 DNASE1L2Q92874 299 aa12.7□□□□□ -0.38
SUPT16H-202ENST00000552829 GJA10Q969M2 543 aa12.7□□□□□ -0.38
SUPT16H-202ENST00000552829 JPH2Q9BR39 696 aaPredicted RBP12.7□□□□□ -0.38
SUPT16H-202ENST00000552829 TEKT3Q9BXF9 490 aa12.7□□□□□ -0.38
SUPT16H-202ENST00000552829 LSG1Q9H089 658 aaKnown RBP12.7□□□□□ -0.38
SUPT16H-202ENST00000552829 DHX33Q9H6R0 707 aaKnown RBP12.7□□□□□ -0.38
SUPT16H-202ENST00000552829 DNMT3BQ9UBC3 853 aaKnown RBP12.7□□□□□ -0.38
SUPT16H-202ENST00000552829 GIT1Q9Y2X7 761 aa12.7□□□□□ -0.38
SUPT16H-202ENST00000552829 TICRRQ7Z2Z1 1910 aa12.69□□□□□ -0.38
SUPT16H-202ENST00000552829 DDX11L8A8MPP1 907 aa12.69□□□□□ -0.38
SUPT16H-202ENST00000552829 CCL16O15467 120 aa12.69□□□□□ -0.38
SUPT16H-202ENST00000552829 ADAM12O43184 909 aa12.69□□□□□ -0.38
SUPT16H-202ENST00000552829 ZBTB43O43298 467 aa12.69□□□□□ -0.38
SUPT16H-202ENST00000552829 XYLBO75191 536 aa12.69□□□□□ -0.38
SUPT16H-202ENST00000552829 NR1I2O75469 434 aa12.69□□□□□ -0.38
SUPT16H-202ENST00000552829 USP11P51784 963 aa12.69□□□□□ -0.38
SUPT16H-202ENST00000552829 EXOSC10Q01780 885 aaKnown RBP12.69□□□□□ -0.38
SUPT16H-202ENST00000552829 LAMTOR4Q0VGL1 99 aa12.69□□□□□ -0.38
SUPT16H-202ENST00000552829 SIM2Q14190 667 aaPredicted RBP12.69□□□□□ -0.38
SUPT16H-202ENST00000552829 GAS6Q14393 721 aa12.69□□□□□ -0.38
SUPT16H-202ENST00000552829 UVSSAQ2YD98 709 aa12.69□□□□□ -0.38
SUPT16H-202ENST00000552829 C8orf34Q49A92 452 aa12.69□□□□□ -0.38
SUPT16H-202ENST00000552829 TANGO2Q6ICL3 276 aa12.69□□□□□ -0.38
SUPT16H-202ENST00000552829 PRR23BQ6ZRT6 265 aa12.69□□□□□ -0.38
SUPT16H-202ENST00000552829 MIER3Q7Z3K6 550 aa12.69□□□□□ -0.38
SUPT16H-202ENST00000552829 ZNF579Q8NAF0 562 aaKnown RBP12.69□□□□□ -0.38
SUPT16H-202ENST00000552829 LNX1Q8TBB1 728 aaPredicted RBP12.69□□□□□ -0.38
SUPT16H-202ENST00000552829 CCDC51Q96ER9 411 aa12.69□□□□□ -0.38
SUPT16H-202ENST00000552829 C6orf50Q9HD87 102 aa12.69□□□□□ -0.38
SUPT16H-202ENST00000552829 AVENQ9NQS1 362 aaPredicted RBP12.69□□□□□ -0.38
SUPT16H-202ENST00000552829 HCFC1R1Q9NWW0 138 aa12.69□□□□□ -0.38
SUPT16H-202ENST00000552829 GDE1Q9NZC3 331 aa12.69□□□□□ -0.38
SUPT16H-202ENST00000552829 HES2Q9Y543 173 aa12.69□□□□□ -0.38
SUPT16H-202ENST00000552829 ZMYM2Q9UBW7 1377 aa12.69□□□□□ -0.38
SUPT16H-202ENST00000552829 MAN2B1O00754 1011 aa12.68□□□□□ -0.38
SUPT16H-202ENST00000552829 TSPAN1O60635 241 aa12.68□□□□□ -0.38
SUPT16H-202ENST00000552829 PAPSS2O95340 614 aaPredicted RBP12.68□□□□□ -0.38
SUPT16H-202ENST00000552829 SRGAP2CP0DJJ0 459 aa12.68□□□□□ -0.38
SUPT16H-202ENST00000552829 FCARP24071 287 aa12.68□□□□□ -0.38
SUPT16H-202ENST00000552829 AXLP30530 894 aa12.68□□□□□ -0.38
SUPT16H-202ENST00000552829 CNR2P34972 360 aa12.68□□□□□ -0.38
SUPT16H-202ENST00000552829 CCR3P51677 355 aa12.68□□□□□ -0.38
SUPT16H-202ENST00000552829 NPEPPSP55786 919 aa12.68□□□□□ -0.38
SUPT16H-202ENST00000552829 SATB1Q01826 763 aa12.68□□□□□ -0.38
SUPT16H-202ENST00000552829 PPP2R5DQ14738 602 aa12.68□□□□□ -0.38
SUPT16H-202ENST00000552829 NECTIN1Q15223 517 aa12.68□□□□□ -0.38
SUPT16H-202ENST00000552829 PABPC1LQ4VXU2 614 aaKnown RBP12.68□□□□□ -0.38
SUPT16H-202ENST00000552829 LIN9Q5TKA1 542 aa12.68□□□□□ -0.38
SUPT16H-202ENST00000552829 CREB3L3Q68CJ9 461 aa12.68□□□□□ -0.38
SUPT16H-202ENST00000552829 RTL10Q7L3V2 364 aa12.68□□□□□ -0.38
SUPT16H-202ENST00000552829 KDF1Q8NAX2 398 aaPredicted RBP12.68□□□□□ -0.38
SUPT16H-202ENST00000552829 RABGGTAQ92696 567 aa12.68□□□□□ -0.38
SUPT16H-202ENST00000552829 ELSPBP1Q96BH3 223 aa12.68□□□□□ -0.38
SUPT16H-202ENST00000552829 TTPALQ9BTX7 342 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms