RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 SIX5Q8N196 739 aa9.64□□□□□ -0.87
TMEM116-217ENST00000552801 TMEM105Q8N8V8 129 aa9.64□□□□□ -0.87
TMEM116-217ENST00000552801 BCL7CQ8WUZ0 217 aaPredicted RBP9.64□□□□□ -0.87
TMEM116-217ENST00000552801 ZFRQ96KR1 1074 aaKnown RBP9.64□□□□□ -0.87
TMEM116-217ENST00000552801 CEP89Q96ST8 783 aa9.64□□□□□ -0.87
TMEM116-217ENST00000552801 CSRNP2Q9H175 543 aa9.64□□□□□ -0.87
TMEM116-217ENST00000552801 ANKEF1Q9NU02 776 aa9.64□□□□□ -0.87
TMEM116-217ENST00000552801 GIT1Q9Y2X7 761 aa9.64□□□□□ -0.87
TMEM116-217ENST00000552801 ZDBF2Q9HCK1 2354 aa9.64□□□□□ -0.87
TMEM116-217ENST00000552801 NEMFO60524 1076 aa9.63□□□□□ -0.87
TMEM116-217ENST00000552801 TSPAN1O60635 241 aa9.63□□□□□ -0.87
TMEM116-217ENST00000552801 NPTXRO95502 500 aa9.63□□□□□ -0.87
TMEM116-217ENST00000552801 CFHP08603 1231 aa9.63□□□□□ -0.87
TMEM116-217ENST00000552801 TXKP42681 527 aa9.63□□□□□ -0.87
TMEM116-217ENST00000552801 SCNN1GP51170 649 aa9.63□□□□□ -0.87
TMEM116-217ENST00000552801 PTENP60484 403 aa9.63□□□□□ -0.87
TMEM116-217ENST00000552801 GRIK3Q13003 919 aa9.63□□□□□ -0.87
TMEM116-217ENST00000552801 GNL2Q13823 731 aaKnown RBP9.63□□□□□ -0.87
TMEM116-217ENST00000552801 USP41Q3LFD5 358 aa9.63□□□□□ -0.87
TMEM116-217ENST00000552801 LIN9Q5TKA1 542 aa9.63□□□□□ -0.87
TMEM116-217ENST00000552801 SLC27A1Q6PCB7 646 aa9.63□□□□□ -0.87
TMEM116-217ENST00000552801 GET4Q7L5D6 327 aaPredicted RBP9.63□□□□□ -0.87
TMEM116-217ENST00000552801 MAEAQ7L5Y9 396 aa9.63□□□□□ -0.87
TMEM116-217ENST00000552801 APBB1IPQ7Z5R6 666 aaPredicted RBP9.63□□□□□ -0.87
TMEM116-217ENST00000552801 GLYCTKQ8IVS8 523 aa9.63□□□□□ -0.87
TMEM116-217ENST00000552801 CMASQ8NFW8 434 aaPredicted RBP9.63□□□□□ -0.87
TMEM116-217ENST00000552801 ERMNQ8TAM6 284 aa9.63□□□□□ -0.87
TMEM116-217ENST00000552801 RIN2Q8WYP3 895 aaPredicted RBP9.63□□□□□ -0.87
TMEM116-217ENST00000552801 NXPE3Q969Y0 559 aa9.63□□□□□ -0.87
TMEM116-217ENST00000552801 HINFPQ9BQA5 517 aa9.63□□□□□ -0.87
TMEM116-217ENST00000552801 EIF2AK1Q9BQI3 630 aaKnown RBP9.63□□□□□ -0.87
TMEM116-217ENST00000552801 ADPGKQ9BRR6 497 aa9.63□□□□□ -0.87
TMEM116-217ENST00000552801 EIF2AQ9BY44 585 aaKnown RBP9.63□□□□□ -0.87
TMEM116-217ENST00000552801 POLR3FQ9H1D9 316 aaPredicted RBP9.63□□□□□ -0.87
TMEM116-217ENST00000552801 SMOC2Q9H3U7 446 aa9.63□□□□□ -0.87
TMEM116-217ENST00000552801 PLEKHA4Q9H4M7 779 aa9.63□□□□□ -0.87
TMEM116-217ENST00000552801 TTC12Q9H892 705 aaPredicted RBP9.63□□□□□ -0.87
TMEM116-217ENST00000552801 MINDY3Q9H8M7 445 aa9.63□□□□□ -0.87
TMEM116-217ENST00000552801 KCNK12Q9HB15 430 aa9.63□□□□□ -0.87
TMEM116-217ENST00000552801 DUSP12Q9UNI6 340 aa9.63□□□□□ -0.87
TMEM116-217ENST00000552801 DENND4AQ7Z401 1863 aa9.63□□□□□ -0.87
TMEM116-217ENST00000552801 CLUHO75153 1309 aa9.63□□□□□ -0.87
TMEM116-217ENST00000552801 SF3B1O75533 1304 aaKnown RBP eCLIP9.63□□□□□ -0.873e-7■■■■■ 114.9
TMEM116-217ENST00000552801 C2orf16Q68DN1 1984 aa9.63□□□□□ -0.87
TMEM116-217ENST00000552801 TEX28O15482 410 aa9.63□□□□□ -0.87
TMEM116-217ENST00000552801 USO1O60763 962 aaKnown RBP9.63□□□□□ -0.87
TMEM116-217ENST00000552801 PFKFB2O60825 505 aa9.63□□□□□ -0.87
TMEM116-217ENST00000552801 SPATA31D3P0C874 917 aa9.63□□□□□ -0.87
TMEM116-217ENST00000552801 LIG1P18858 919 aa9.63□□□□□ -0.87
TMEM116-217ENST00000552801 ATP2B1P20020 1258 aa9.63□□□□□ -0.87
TMEM116-217ENST00000552801 HOXA11P31270 313 aaPredicted RBP9.63□□□□□ -0.87
TMEM116-217ENST00000552801 DSG1Q02413 1049 aa9.63□□□□□ -0.87
TMEM116-217ENST00000552801 UBXN11Q5T124 520 aa9.63□□□□□ -0.87
TMEM116-217ENST00000552801 SPATA31D4Q6ZUB0 917 aa9.63□□□□□ -0.87
TMEM116-217ENST00000552801 CEP57Q86XR8 500 aa9.63□□□□□ -0.87
TMEM116-217ENST00000552801 COLGALT2Q8IYK4 626 aa9.63□□□□□ -0.87
TMEM116-217ENST00000552801 SMG8Q8ND04 991 aaKnown RBP9.63□□□□□ -0.87
TMEM116-217ENST00000552801 MCPH1Q8NEM0 835 aa9.63□□□□□ -0.87
TMEM116-217ENST00000552801 ANKK1Q8NFD2 765 aa9.63□□□□□ -0.87
TMEM116-217ENST00000552801 HDAC7Q8WUI4 952 aa9.63□□□□□ -0.87
TMEM116-217ENST00000552801 HAS1Q92839 578 aa9.63□□□□□ -0.87
TMEM116-217ENST00000552801 ZFP42Q96MM3 310 aa9.63□□□□□ -0.87
TMEM116-217ENST00000552801 VN1R3Q9BXE9 311 aa9.63□□□□□ -0.87
TMEM116-217ENST00000552801 C2orf40Q9H1Z8 148 aa9.63□□□□□ -0.87
TMEM116-217ENST00000552801 WDR6Q9NNW5 1121 aaKnown RBP9.63□□□□□ -0.87
TMEM116-217ENST00000552801 PRMT7Q9NVM4 692 aaPredicted RBP9.63□□□□□ -0.87
TMEM116-217ENST00000552801 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.63□□□□□ -0.87
TMEM116-217ENST00000552801 KLK14Q9P0G3 267 aa9.63□□□□□ -0.87
TMEM116-217ENST00000552801 WRAP73Q9P2S5 460 aaPredicted RBP9.63□□□□□ -0.87
TMEM116-217ENST00000552801 ADAM28Q9UKQ2 775 aa9.63□□□□□ -0.87
TMEM116-217ENST00000552801 CA14Q9ULX7 337 aa9.63□□□□□ -0.87
TMEM116-217ENST00000552801 POLIQ9UNA4 740 aa9.63□□□□□ -0.87
TMEM116-217ENST00000552801 HES2Q9Y543 173 aa9.63□□□□□ -0.87
TMEM116-217ENST00000552801 C3orf80F5H4A9 247 aa9.62□□□□□ -0.87
TMEM116-217ENST00000552801 N4BP3O15049 544 aa9.62□□□□□ -0.87
TMEM116-217ENST00000552801 GPR37O15354 613 aa9.62□□□□□ -0.87
TMEM116-217ENST00000552801 SLITRK3O94933 977 aa9.62□□□□□ -0.87
TMEM116-217ENST00000552801 ARF4P18085 180 aaPredicted RBP9.62□□□□□ -0.87
TMEM116-217ENST00000552801 AOC1P19801 751 aa9.62□□□□□ -0.87
TMEM116-217ENST00000552801 AKAP5P24588 427 aa9.62□□□□□ -0.87
TMEM116-217ENST00000552801 NBL1P41271 181 aa9.62□□□□□ -0.87
TMEM116-217ENST00000552801 AFF1P51825 1210 aaKnown RBP9.62□□□□□ -0.87
TMEM116-217ENST00000552801 MBTD1Q05BQ5 628 aa9.62□□□□□ -0.87
TMEM116-217ENST00000552801 POU5F1BQ06416 359 aa9.62□□□□□ -0.87
TMEM116-217ENST00000552801 NR5A1Q13285 461 aa9.62□□□□□ -0.87
TMEM116-217ENST00000552801 CAPSQ13938 189 aa9.62□□□□□ -0.87
TMEM116-217ENST00000552801 BECN1Q14457 450 aa9.62□□□□□ -0.87
TMEM116-217ENST00000552801 NPY5RQ15761 445 aa9.62□□□□□ -0.87
TMEM116-217ENST00000552801 FUT10Q6P4F1 479 aa9.62□□□□□ -0.87
TMEM116-217ENST00000552801 PDXDC1Q6P996 788 aa9.62□□□□□ -0.87
TMEM116-217ENST00000552801 FRMD5Q7Z6J6 570 aa9.62□□□□□ -0.87
TMEM116-217ENST00000552801 DEPTORQ8TB45 409 aa9.62□□□□□ -0.87
TMEM116-217ENST00000552801 NXF3Q9H4D5 531 aaKnown RBP9.62□□□□□ -0.87
TMEM116-217ENST00000552801 MARCH5Q9NX47 278 aa9.62□□□□□ -0.87
TMEM116-217ENST00000552801 ZDHHC7Q9NXF8 308 aa9.62□□□□□ -0.87
TMEM116-217ENST00000552801 WNT16Q9UBV4 365 aa9.62□□□□□ -0.87
TMEM116-217ENST00000552801 DAXXQ9UER7 740 aaPredicted RBP9.62□□□□□ -0.87
TMEM116-217ENST00000552801 TPCN1Q9ULQ1 816 aa9.62□□□□□ -0.87
TMEM116-217ENST00000552801 WDFY4Q6ZS81 3184 aa9.61□□□□□ -0.87
TMEM116-217ENST00000552801 PLXNA3P51805 1871 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 250 ms