RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 TUBB2AQ13885 445 aa11.51□□□□□ -0.57
TGFBR1-209ENST00000552516 TREML2Q5T2D2 321 aa11.51□□□□□ -0.57
TGFBR1-209ENST00000552516 AGR3Q8TD06 166 aa11.51□□□□□ -0.57
TGFBR1-209ENST00000552516 TUBB2BQ9BVA1 445 aa11.51□□□□□ -0.57
TGFBR1-209ENST00000552516 PASKQ96RG2 1323 aa11.51□□□□□ -0.57
TGFBR1-209ENST00000552516 FRMD3A2A2Y4 597 aa11.51□□□□□ -0.57
TGFBR1-209ENST00000552516 UPP2O95045 317 aa11.51□□□□□ -0.57
TGFBR1-209ENST00000552516 TTLL4Q14679 1199 aa11.51□□□□□ -0.57
TGFBR1-209ENST00000552516 RWDD4Q6NW29 188 aaKnown RBP11.51□□□□□ -0.57
TGFBR1-209ENST00000552516 RUFY4Q6ZNE9 571 aa11.51□□□□□ -0.57
TGFBR1-209ENST00000552516 C2orf69Q8N8R5 385 aa11.51□□□□□ -0.57
TGFBR1-209ENST00000552516 CCDC110Q8TBZ0 833 aa11.51□□□□□ -0.57
TGFBR1-209ENST00000552516 LPAR1Q92633 364 aa11.51□□□□□ -0.57
TGFBR1-209ENST00000552516 AGAP3Q96P47 875 aa11.51□□□□□ -0.57
TGFBR1-209ENST00000552516 CYP26B1Q9NR63 512 aa11.51□□□□□ -0.57
TGFBR1-209ENST00000552516 GON4LQ3T8J9 2241 aa11.51□□□□□ -0.57
TGFBR1-209ENST00000552516 SASH3O75995 380 aa11.51□□□□□ -0.57
TGFBR1-209ENST00000552516 TAF1CQ15572 869 aaPredicted RBP11.51□□□□□ -0.57
TGFBR1-209ENST00000552516 ANKS4BQ8N8V4 417 aa11.51□□□□□ -0.57
TGFBR1-209ENST00000552516 C1orf131Q8NDD1 294 aaKnown RBP11.51□□□□□ -0.57
TGFBR1-209ENST00000552516 AGBL3Q8NEM8 1001 aa11.51□□□□□ -0.57
TGFBR1-209ENST00000552516 C18orf8Q96DM3 657 aa11.51□□□□□ -0.57
TGFBR1-209ENST00000552516 ZSCAN20P17040 1043 aaPredicted RBP11.51□□□□□ -0.57
TGFBR1-209ENST00000552516 FAM71BQ8TC56 605 aa11.51□□□□□ -0.57
TGFBR1-209ENST00000552516 DNAJC19Q96DA6 116 aa11.51□□□□□ -0.57
TGFBR1-209ENST00000552516 CYFIP2Q96F07 1278 aa11.51□□□□□ -0.57
TGFBR1-209ENST00000552516 INTS9Q9NV88 658 aaKnown RBP11.51□□□□□ -0.57
TGFBR1-209ENST00000552516 XRN1Q8IZH2 1706 aaKnown RBP11.5□□□□□ -0.57
TGFBR1-209ENST00000552516 H3BQF6 201 aa11.5□□□□□ -0.57
TGFBR1-209ENST00000552516 NR1D1P20393 614 aa11.5□□□□□ -0.57
TGFBR1-209ENST00000552516 HADHQ16836 314 aaKnown RBP11.5□□□□□ -0.57
TGFBR1-209ENST00000552516 LONRF1Q17RB8 773 aa11.5□□□□□ -0.57
TGFBR1-209ENST00000552516 CEP120Q8N960 986 aa11.5□□□□□ -0.57
TGFBR1-209ENST00000552516 AFG1LQ8WV93 481 aa11.5□□□□□ -0.57
TGFBR1-209ENST00000552516 CDCA5Q96FF9 252 aa11.5□□□□□ -0.57
TGFBR1-209ENST00000552516 FAM163AQ96GL9 167 aaPredicted RBP11.5□□□□□ -0.57
TGFBR1-209ENST00000552516 GMCL1Q96IK5 515 aa11.5□□□□□ -0.57
TGFBR1-209ENST00000552516 RPGRIP1Q96KN7 1286 aa11.5□□□□□ -0.57
TGFBR1-209ENST00000552516 GPATCH2LQ9NWQ4 482 aa11.5□□□□□ -0.57
TGFBR1-209ENST00000552516 CHD2O14647 1828 aaKnown RBP11.5□□□□□ -0.57
TGFBR1-209ENST00000552516 TAF1P21675 1872 aa11.5□□□□□ -0.57
TGFBR1-209ENST00000552516 UBE4BO95155 1302 aa11.5□□□□□ -0.57
TGFBR1-209ENST00000552516 SPATA31C1P0DKV0 1188 aa11.5□□□□□ -0.57
TGFBR1-209ENST00000552516 SLC12A3P55017 1021 aa11.5□□□□□ -0.57
TGFBR1-209ENST00000552516 PSMD6Q15008 389 aa11.5□□□□□ -0.57
TGFBR1-209ENST00000552516 E2F5Q15329 346 aa11.5□□□□□ -0.57
TGFBR1-209ENST00000552516 OR6J1Q8NGC5 347 aa11.5□□□□□ -0.57
TGFBR1-209ENST00000552516 ANKS1AQ92625 1134 aa11.5□□□□□ -0.57
TGFBR1-209ENST00000552516 LENG1Q96BZ8 264 aaPredicted RBP11.5□□□□□ -0.57
TGFBR1-209ENST00000552516 SPC25Q9HBM1 224 aa11.5□□□□□ -0.57
TGFBR1-209ENST00000552516 SLC38A10Q9HBR0 1119 aa11.5□□□□□ -0.57
TGFBR1-209ENST00000552516 AGO4Q9HCK5 861 aaKnown RBP11.5□□□□□ -0.57
TGFBR1-209ENST00000552516 ITGB3P05106 788 aa11.5□□□□□ -0.57
TGFBR1-209ENST00000552516 PPP3CAQ08209 521 aa11.5□□□□□ -0.57
TGFBR1-209ENST00000552516 GPS1Q13098 491 aa11.5□□□□□ -0.57
TGFBR1-209ENST00000552516 RBBP8NLQ8NC74 664 aaPredicted RBP11.5□□□□□ -0.57
TGFBR1-209ENST00000552516 SEPT1Q8WYJ6 367 aa11.5□□□□□ -0.57
TGFBR1-209ENST00000552516 ARHGEF26Q96DR7 871 aa11.5□□□□□ -0.57
TGFBR1-209ENST00000552516 A8MXQ7 604 aa11.5□□□□□ -0.57
TGFBR1-209ENST00000552516 GLI1P08151 1106 aa11.5□□□□□ -0.57
TGFBR1-209ENST00000552516 PLA2G4AP47712 749 aa11.5□□□□□ -0.57
TGFBR1-209ENST00000552516 GCLCP48506 637 aaPredicted RBP11.5□□□□□ -0.57
TGFBR1-209ENST00000552516 NOP14P78316 857 aaKnown RBP11.5□□□□□ -0.57
TGFBR1-209ENST00000552516 GABPAQ06546 454 aa11.5□□□□□ -0.57
TGFBR1-209ENST00000552516 KCNMA1Q12791 1236 aa11.5□□□□□ -0.57
TGFBR1-209ENST00000552516 NEDD9Q14511 834 aa11.5□□□□□ -0.57
TGFBR1-209ENST00000552516 XKR3Q5GH77 459 aa11.5□□□□□ -0.57
TGFBR1-209ENST00000552516 MIIPQ5JXC2 388 aa11.5□□□□□ -0.57
TGFBR1-209ENST00000552516 IDI2Q9BXS1 227 aa11.5□□□□□ -0.57
TGFBR1-209ENST00000552516 SAE1Q9UBE0 346 aaPredicted RBP11.5□□□□□ -0.57
TGFBR1-209ENST00000552516 PLSCR1O15162 318 aa11.5□□□□□ -0.57
TGFBR1-209ENST00000552516 DSTYKQ6XUX3 929 aa11.5□□□□□ -0.57
TGFBR1-209ENST00000552516 MCUQ8NE86 351 aa11.5□□□□□ -0.57
TGFBR1-209ENST00000552516 RILPQ96NA2 401 aa11.5□□□□□ -0.57
TGFBR1-209ENST00000552516 ERGIC2Q96RQ1 377 aa11.5□□□□□ -0.57
TGFBR1-209ENST00000552516 PDGFCQ9NRA1 345 aa11.5□□□□□ -0.57
TGFBR1-209ENST00000552516 POLIQ9UNA4 740 aa11.5□□□□□ -0.57
TGFBR1-209ENST00000552516 A6NJR5 290 aa11.49□□□□□ -0.57
TGFBR1-209ENST00000552516 TNPO2O14787 897 aaKnown RBP11.49□□□□□ -0.57
TGFBR1-209ENST00000552516 TRIM66O15016 1216 aa11.49□□□□□ -0.57
TGFBR1-209ENST00000552516 DGAT1O75907 488 aa11.49□□□□□ -0.57
TGFBR1-209ENST00000552516 FAM153BP0C7A2 387 aa11.49□□□□□ -0.57
TGFBR1-209ENST00000552516 P4HA1P13674 534 aa11.49□□□□□ -0.57
TGFBR1-209ENST00000552516 AKAP5P24588 427 aa11.49□□□□□ -0.57
TGFBR1-209ENST00000552516 FAM153CQ494X1 144 aa11.49□□□□□ -0.57
TGFBR1-209ENST00000552516 SV2AQ7L0J3 742 aa11.49□□□□□ -0.57
TGFBR1-209ENST00000552516 ANKRD7Q92527 254 aa11.49□□□□□ -0.57
TGFBR1-209ENST00000552516 ELAC2Q9BQ52 826 aaKnown RBP11.49□□□□□ -0.57
TGFBR1-209ENST00000552516 SETD4Q9NVD3 440 aa11.49□□□□□ -0.57
TGFBR1-209ENST00000552516 FAM153AQ9UHL3 310 aa11.49□□□□□ -0.57
TGFBR1-209ENST00000552516 CCDC195A0A1B0GUA6 201 aa11.49□□□□□ -0.57
TGFBR1-209ENST00000552516 PTPRAP18433 802 aa11.49□□□□□ -0.57
TGFBR1-209ENST00000552516 RRM1P23921 792 aa11.49□□□□□ -0.57
TGFBR1-209ENST00000552516 SFNP31947 248 aa11.49□□□□□ -0.57
TGFBR1-209ENST00000552516 FOXD4Q12950 439 aaPredicted RBP11.49□□□□□ -0.57
TGFBR1-209ENST00000552516 RFX8Q6ZV50 586 aa11.49□□□□□ -0.57
TGFBR1-209ENST00000552516 PPP1R36Q96LQ0 422 aa11.49□□□□□ -0.57
TGFBR1-209ENST00000552516 FERMT1Q9BQL6 677 aa11.49□□□□□ -0.57
TGFBR1-209ENST00000552516 CEP41Q9BYV8 373 aa11.49□□□□□ -0.57
TGFBR1-209ENST00000552516 MTFR1LQ9H019 292 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms