RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 DDHD2O94830 711 aa20.22■□□□□ 0.83
PRPF40B-216ENST00000552301 GCNT3O95395 438 aa20.22■□□□□ 0.83
PRPF40B-216ENST00000552301 ALDH2P05091 517 aa20.22■□□□□ 0.83
PRPF40B-216ENST00000552301 GALTP07902 379 aa20.22■□□□□ 0.83
PRPF40B-216ENST00000552301 PROZP22891 400 aa20.22■□□□□ 0.83
PRPF40B-216ENST00000552301 OR1G1P47890 313 aa20.22■□□□□ 0.83
PRPF40B-216ENST00000552301 SLC11A1P49279 550 aa20.22■□□□□ 0.83
PRPF40B-216ENST00000552301 OSTNP61366 133 aa20.22■□□□□ 0.83
PRPF40B-216ENST00000552301 GTF2BQ00403 316 aa20.22■□□□□ 0.83
PRPF40B-216ENST00000552301 ALCAMQ13740 583 aa20.22■□□□□ 0.83
PRPF40B-216ENST00000552301 STXBP4Q6ZWJ1 553 aa20.22■□□□□ 0.83
PRPF40B-216ENST00000552301 MAP4K3Q8IVH8 894 aa20.22■□□□□ 0.83
PRPF40B-216ENST00000552301 FSIP1Q8NA03 581 aa20.22■□□□□ 0.83
PRPF40B-216ENST00000552301 ZBTB45Q96K62 511 aaPredicted RBP20.22■□□□□ 0.83
PRPF40B-216ENST00000552301 FIZ1Q96SL8 496 aa20.22■□□□□ 0.83
PRPF40B-216ENST00000552301 OLFML3Q9NRN5 406 aa20.22■□□□□ 0.83
PRPF40B-216ENST00000552301 EXOC7Q9UPT5 735 aa20.22■□□□□ 0.83
PRPF40B-216ENST00000552301 FAN1Q9Y2M0 1017 aa20.22■□□□□ 0.83
PRPF40B-216ENST00000552301 PRG3Q9Y2Y8 225 aaPredicted RBP20.22■□□□□ 0.83
PRPF40B-216ENST00000552301 FRMD3A2A2Y4 597 aa20.21■□□□□ 0.83
PRPF40B-216ENST00000552301 PIGRP01833 764 aa20.21■□□□□ 0.83
PRPF40B-216ENST00000552301 SYKP43405 635 aa20.21■□□□□ 0.83
PRPF40B-216ENST00000552301 AFMP43652 599 aa20.21■□□□□ 0.83
PRPF40B-216ENST00000552301 COASYQ13057 564 aa20.21■□□□□ 0.83
PRPF40B-216ENST00000552301 ZC2HC1CQ53FD0 456 aaPredicted RBP20.21■□□□□ 0.83
PRPF40B-216ENST00000552301 TCEAL5Q5H9L2 206 aa20.21■□□□□ 0.83
PRPF40B-216ENST00000552301 PDE12Q6L8Q7 609 aaKnown RBP20.21■□□□□ 0.83
PRPF40B-216ENST00000552301 ZNF720Q7Z2F6 126 aa20.21■□□□□ 0.83
PRPF40B-216ENST00000552301 CEP120Q8N960 986 aa20.21■□□□□ 0.83
PRPF40B-216ENST00000552301 IGSF21Q96ID5 467 aa20.21■□□□□ 0.83
PRPF40B-216ENST00000552301 ACAP3Q96P50 834 aa20.21■□□□□ 0.83
PRPF40B-216ENST00000552301 THEGQ9P2T0 379 aa20.21■□□□□ 0.83
PRPF40B-216ENST00000552301 SERTAD1Q9UHV2 236 aa20.21■□□□□ 0.83
PRPF40B-216ENST00000552301 PCDHB13Q9Y5F0 798 aa20.21■□□□□ 0.83
PRPF40B-216ENST00000552301 ABLIM1O14639 778 aa20.2■□□□□ 0.82
PRPF40B-216ENST00000552301 B4GALT3O60512 393 aa20.2■□□□□ 0.82
PRPF40B-216ENST00000552301 THP07101 528 aa20.2■□□□□ 0.82
PRPF40B-216ENST00000552301 SLFN14P0C7P3 912 aa20.2■□□□□ 0.82
PRPF40B-216ENST00000552301 DNAJB1P25685 340 aa20.2■□□□□ 0.82
PRPF40B-216ENST00000552301 CA8P35219 290 aa20.2■□□□□ 0.82
PRPF40B-216ENST00000552301 MCL1Q07820 350 aa20.2■□□□□ 0.82
PRPF40B-216ENST00000552301 DSC1Q08554 894 aa20.2■□□□□ 0.82
PRPF40B-216ENST00000552301 TMC7Q7Z402 723 aa20.2■□□□□ 0.82
PRPF40B-216ENST00000552301 COLGALT2Q8IYK4 626 aa20.2■□□□□ 0.82
PRPF40B-216ENST00000552301 C7orf25Q9BPX7 421 aa20.2■□□□□ 0.82
PRPF40B-216ENST00000552301 TCF25Q9BQ70 676 aa20.2■□□□□ 0.82
PRPF40B-216ENST00000552301 MIOSQ9NXC5 875 aa20.2■□□□□ 0.82
PRPF40B-216ENST00000552301 NRP1O14786 923 aa20.19■□□□□ 0.82
PRPF40B-216ENST00000552301 IRS1P35568 1242 aa20.19■□□□□ 0.82
PRPF40B-216ENST00000552301 TUSC3Q13454 348 aa20.19■□□□□ 0.82
PRPF40B-216ENST00000552301 CAMK1Q14012 370 aa20.19■□□□□ 0.82
PRPF40B-216ENST00000552301 KYAT1Q16773 422 aa20.19■□□□□ 0.82
PRPF40B-216ENST00000552301 PLPP4Q5VZY2 271 aa20.19■□□□□ 0.82
PRPF40B-216ENST00000552301 TMEM173Q86WV6 379 aaPredicted RBP20.19■□□□□ 0.82
PRPF40B-216ENST00000552301 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.19■□□□□ 0.82
PRPF40B-216ENST00000552301 SYCP3Q8IZU3 236 aa20.19■□□□□ 0.82
PRPF40B-216ENST00000552301 GSTCDQ8NEC7 633 aa20.19■□□□□ 0.82
PRPF40B-216ENST00000552301 CCDC34Q96HJ3 373 aa20.19■□□□□ 0.82
PRPF40B-216ENST00000552301 ACCSQ96QU6 501 aa20.19■□□□□ 0.82
PRPF40B-216ENST00000552301 MSTO1Q9BUK6 570 aa20.19■□□□□ 0.82
PRPF40B-216ENST00000552301 COLEC11Q9BWP8 271 aa20.19■□□□□ 0.82
PRPF40B-216ENST00000552301 BLZF1Q9H2G9 400 aa20.19■□□□□ 0.82
PRPF40B-216ENST00000552301 NGRNQ9NPE2 291 aaKnown RBP20.19■□□□□ 0.82
PRPF40B-216ENST00000552301 STK39Q9UEW8 545 aa20.19■□□□□ 0.82
PRPF40B-216ENST00000552301 COG5Q9UP83 839 aa20.19■□□□□ 0.82
PRPF40B-216ENST00000552301 HPSEQ9Y251 543 aa20.19■□□□□ 0.82
PRPF40B-216ENST00000552301 A0A0C4DFX4 3053 aa20.19■□□□□ 0.82
PRPF40B-216ENST00000552301 UNC80Q8N2C7 3258 aa20.19■□□□□ 0.82
PRPF40B-216ENST00000552301 PTGESO14684 152 aa20.18■□□□□ 0.82
PRPF40B-216ENST00000552301 ACTN4O43707 911 aaKnown RBP20.18■□□□□ 0.82
PRPF40B-216ENST00000552301 PPP1R37O75864 691 aa20.18■□□□□ 0.82
PRPF40B-216ENST00000552301 NDUFA8P51970 172 aa20.18■□□□□ 0.82
PRPF40B-216ENST00000552301 GLRA4Q5JXX5 417 aa20.18■□□□□ 0.82
PRPF40B-216ENST00000552301 L1TD1Q5T7N2 865 aaKnown RBP20.18■□□□□ 0.82
PRPF40B-216ENST00000552301 SLFN12LQ6IEE8 588 aa20.18■□□□□ 0.82
PRPF40B-216ENST00000552301 CNNM4Q6P4Q7 775 aa20.18■□□□□ 0.82
PRPF40B-216ENST00000552301 EP400NLQ6ZTU2 488 aa20.18■□□□□ 0.82
PRPF40B-216ENST00000552301 UNC13DQ70J99 1090 aa20.18■□□□□ 0.82
PRPF40B-216ENST00000552301 DDX53Q86TM3 631 aaKnown RBP20.18■□□□□ 0.82
PRPF40B-216ENST00000552301 HLA-CQ95604 372 aa20.18■□□□□ 0.82
PRPF40B-216ENST00000552301 PRDM6Q9NQX0 595 aa20.18■□□□□ 0.82
PRPF40B-216ENST00000552301 CHMP5Q9NZZ3 219 aa20.18■□□□□ 0.82
PRPF40B-216ENST00000552301 CITO14578 2027 aa20.18■□□□□ 0.82
PRPF40B-216ENST00000552301 CASTOR2A6NHX0 329 aa20.17■□□□□ 0.82
PRPF40B-216ENST00000552301 OGTO15294 1046 aa20.17■□□□□ 0.82
PRPF40B-216ENST00000552301 NCK2O43639 380 aa20.17■□□□□ 0.82
PRPF40B-216ENST00000552301 CLTAP09496 248 aa20.17■□□□□ 0.82
PRPF40B-216ENST00000552301 MYBP10242 640 aa20.17■□□□□ 0.82
PRPF40B-216ENST00000552301 ERVFC1P60507 584 aa20.17■□□□□ 0.82
PRPF40B-216ENST00000552301 SMC1AQ14683 1233 aaKnown RBP20.17■□□□□ 0.82
PRPF40B-216ENST00000552301 FAM26FQ5R3K3 315 aa20.17■□□□□ 0.82
PRPF40B-216ENST00000552301 GRAMD1CQ8IYS0 662 aa20.17■□□□□ 0.82
PRPF40B-216ENST00000552301 VPS52Q8N1B4 723 aa20.17■□□□□ 0.82
PRPF40B-216ENST00000552301 TMEM87AQ8NBN3 555 aa20.17■□□□□ 0.82
PRPF40B-216ENST00000552301 SNX27Q96L92 541 aa20.17■□□□□ 0.82
PRPF40B-216ENST00000552301 TLE6Q9H808 572 aa20.17■□□□□ 0.82
PRPF40B-216ENST00000552301 SLC38A7Q9NVC3 462 aa20.17■□□□□ 0.82
PRPF40B-216ENST00000552301 ATG2AQ2TAZ0 1938 aa20.17■□□□□ 0.82
PRPF40B-216ENST00000552301 TRANK1O15050 2925 aa20.16■□□□□ 0.82
PRPF40B-216ENST00000552301 FAM237AA0A1B0GTK4 181 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms