RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 CYP46A1Q9Y6A2 500 aa24.06■■□□□ 1.44
SMARCD1-212ENST00000551966 EP300Q09472 2414 aaPredicted RBP24.05■■□□□ 1.44
SMARCD1-212ENST00000551966 A0A1B0GUA9 196 aa24.05■■□□□ 1.44
SMARCD1-212ENST00000551966 FAM205CA6NFA0 338 aa24.05■■□□□ 1.44
SMARCD1-212ENST00000551966 NPTXRO95502 500 aa24.05■■□□□ 1.44
SMARCD1-212ENST00000551966 GLRA2P23416 452 aa24.05■■□□□ 1.44
SMARCD1-212ENST00000551966 FSHRP23945 695 aa24.05■■□□□ 1.44
SMARCD1-212ENST00000551966 CPLX2Q6PUV4 134 aaKnown RBP24.05■■□□□ 1.44
SMARCD1-212ENST00000551966 PJA1Q8NG27 643 aa24.05■■□□□ 1.44
SMARCD1-212ENST00000551966 EIF2AK1Q9BQI3 630 aaKnown RBP24.05■■□□□ 1.44
SMARCD1-212ENST00000551966 TRIM6Q9C030 488 aaPredicted RBP24.05■■□□□ 1.44
SMARCD1-212ENST00000551966 WDR87Q6ZQQ6 2873 aa24.05■■□□□ 1.44
SMARCD1-212ENST00000551966 A0A087WWV3 80 aa24.04■■□□□ 1.44
SMARCD1-212ENST00000551966 REC8O95072 547 aa24.04■■□□□ 1.44
SMARCD1-212ENST00000551966 LYPLA2O95372 231 aa24.04■■□□□ 1.44
SMARCD1-212ENST00000551966 SCRN1Q12765 414 aa24.04■■□□□ 1.44
SMARCD1-212ENST00000551966 GRIK3Q13003 919 aa24.04■■□□□ 1.44
SMARCD1-212ENST00000551966 SLC27A1Q6PCB7 646 aa24.04■■□□□ 1.44
SMARCD1-212ENST00000551966 NFKBIZQ9BYH8 718 aa24.04■■□□□ 1.44
SMARCD1-212ENST00000551966 CXCL16Q9H2A7 254 aa24.04■■□□□ 1.44
SMARCD1-212ENST00000551966 PARP2Q9UGN5 583 aa24.04■■□□□ 1.44
SMARCD1-212ENST00000551966 FBXW11Q9UKB1 542 aa24.04■■□□□ 1.44
SMARCD1-212ENST00000551966 ZFP37Q9Y6Q3 630 aaPredicted RBP24.04■■□□□ 1.44
SMARCD1-212ENST00000551966 COL4A3Q01955 1670 aa24.04■■□□□ 1.44
SMARCD1-212ENST00000551966 DMXL1Q9Y485 3027 aa24.03■■□□□ 1.44
SMARCD1-212ENST00000551966 DGAT1O75907 488 aa24.03■■□□□ 1.44
SMARCD1-212ENST00000551966 SNW1Q13573 536 aaKnown RBP24.03■■□□□ 1.44
SMARCD1-212ENST00000551966 HSP90AA2PQ14568 343 aaPredicted RBP24.03■■□□□ 1.44
SMARCD1-212ENST00000551966 SLFN12Q8IYM2 578 aa24.03■■□□□ 1.44
SMARCD1-212ENST00000551966 HACE1Q8IYU2 909 aa24.03■■□□□ 1.44
SMARCD1-212ENST00000551966 SUMF1Q8NBK3 374 aa24.03■■□□□ 1.44
SMARCD1-212ENST00000551966 LNX1Q8TBB1 728 aaPredicted RBP24.03■■□□□ 1.44
SMARCD1-212ENST00000551966 NAP1L4Q99733 375 aaKnown RBP24.03■■□□□ 1.44
SMARCD1-212ENST00000551966 TM6SF1Q9BZW5 370 aa24.03■■□□□ 1.44
SMARCD1-212ENST00000551966 ANKEF1Q9NU02 776 aa24.03■■□□□ 1.44
SMARCD1-212ENST00000551966 CDH7Q9ULB5 785 aa24.03■■□□□ 1.44
SMARCD1-212ENST00000551966 FANCMQ8IYD8 2048 aa24.03■■□□□ 1.44
SMARCD1-212ENST00000551966 BAG4O95429 457 aaKnown RBP24.02■■□□□ 1.44
SMARCD1-212ENST00000551966 CREMQ03060 361 aa24.02■■□□□ 1.44
SMARCD1-212ENST00000551966 DGLUCYQ7Z3D6 616 aa24.02■■□□□ 1.44
SMARCD1-212ENST00000551966 HASPINQ8TF76 798 aa24.02■■□□□ 1.44
SMARCD1-212ENST00000551966 RUBCNQ92622 972 aa24.02■■□□□ 1.44
SMARCD1-212ENST00000551966 DDX23Q9BUQ8 820 aaKnown RBP24.02■■□□□ 1.44
SMARCD1-212ENST00000551966 MTF2Q9Y483 593 aaPredicted RBP24.02■■□□□ 1.44
SMARCD1-212ENST00000551966 CACNA1IQ9P0X4 2223 aa24.02■■□□□ 1.44
SMARCD1-212ENST00000551966 CACNA1AO00555 2505 aa24.01■■□□□ 1.43
SMARCD1-212ENST00000551966 TTLL13PA6NNM8 815 aa24.01■■□□□ 1.43
SMARCD1-212ENST00000551966 ADAM12O43184 909 aa24.01■■□□□ 1.43
SMARCD1-212ENST00000551966 RARRES1P49788 294 aa24.01■■□□□ 1.43
SMARCD1-212ENST00000551966 ZC3H14Q6PJT7 736 aaKnown RBP24.01■■□□□ 1.43
SMARCD1-212ENST00000551966 FGF13Q92913 245 aa24.01■■□□□ 1.43
SMARCD1-212ENST00000551966 TTPALQ9BTX7 342 aa24.01■■□□□ 1.43
SMARCD1-212ENST00000551966 KANSL1LA0AUZ9 987 aa24■■□□□ 1.43
SMARCD1-212ENST00000551966 CASTOR2A6NHX0 329 aa24■■□□□ 1.43
SMARCD1-212ENST00000551966 PTGESO14684 152 aa24■■□□□ 1.43
SMARCD1-212ENST00000551966 HNRNPA1P09651 372 aaKnown RBP eCLIP24■■□□□ 1.43
SMARCD1-212ENST00000551966 NR5A1Q13285 461 aa24■■□□□ 1.43
SMARCD1-212ENST00000551966 TUSC3Q13454 348 aa24■■□□□ 1.43
SMARCD1-212ENST00000551966 SLC44A4Q53GD3 710 aa24■■□□□ 1.43
SMARCD1-212ENST00000551966 FAM171A1Q5VUB5 890 aa24■■□□□ 1.43
SMARCD1-212ENST00000551966 CEP57Q86XR8 500 aa24■■□□□ 1.43
SMARCD1-212ENST00000551966 ITFG1Q8TB96 612 aa24■■□□□ 1.43
SMARCD1-212ENST00000551966 PIGOQ8TEQ8 1089 aa24■■□□□ 1.43
SMARCD1-212ENST00000551966 PIK3R5Q8WYR1 880 aa24■■□□□ 1.43
SMARCD1-212ENST00000551966 SHDQ96IW2 340 aa24■■□□□ 1.43
SMARCD1-212ENST00000551966 POLR3FQ9H1D9 316 aaPredicted RBP24■■□□□ 1.43
SMARCD1-212ENST00000551966 PDRG1Q9NUG6 133 aa24■■□□□ 1.43
SMARCD1-212ENST00000551966 PCDHA12Q9UN75 941 aa24■■□□□ 1.43
SMARCD1-212ENST00000551966 SF3B1O75533 1304 aaKnown RBP eCLIP24■■□□□ 1.434e-7■■■■■ 133.7
SMARCD1-212ENST00000551966 ZMYM2Q9UBW7 1377 aa24■■□□□ 1.43
SMARCD1-212ENST00000551966 CCL16O15467 120 aa23.99■■□□□ 1.43
SMARCD1-212ENST00000551966 KIF4AO95239 1232 aa23.99■■□□□ 1.43
SMARCD1-212ENST00000551966 CTDNEP1O95476 244 aa23.99■■□□□ 1.43
SMARCD1-212ENST00000551966 IGFBP6P24592 240 aaPredicted RBP23.99■■□□□ 1.43
SMARCD1-212ENST00000551966 PUM1Q14671 1186 aaKnown RBP eCLIP23.99■■□□□ 1.43
SMARCD1-212ENST00000551966 NAB2Q15742 525 aa23.99■■□□□ 1.43
SMARCD1-212ENST00000551966 PPM1LQ5SGD2 360 aa23.99■■□□□ 1.43
SMARCD1-212ENST00000551966 TNFRSF25Q93038 417 aa23.99■■□□□ 1.43
SMARCD1-212ENST00000551966 HINFPQ9BQA5 517 aa23.99■■□□□ 1.43
SMARCD1-212ENST00000551966 GPRC5CQ9NQ84 441 aa23.99■■□□□ 1.43
SMARCD1-212ENST00000551966 DLL3Q9NYJ7 618 aa23.99■■□□□ 1.43
SMARCD1-212ENST00000551966 MYH15Q9Y2K3 1946 aa23.99■■□□□ 1.43
SMARCD1-212ENST00000551966 STK36Q9NRP7 1315 aa23.99■■□□□ 1.43
SMARCD1-212ENST00000551966 C8AP07357 584 aa23.98■■□□□ 1.43
SMARCD1-212ENST00000551966 XBP1P17861 261 aa23.98■■□□□ 1.43
SMARCD1-212ENST00000551966 PSMD5Q16401 504 aa23.98■■□□□ 1.43
SMARCD1-212ENST00000551966 PPP4R3CPQ6ZMV5 832 aa23.98■■□□□ 1.43
SMARCD1-212ENST00000551966 MAEAQ7L5Y9 396 aa23.98■■□□□ 1.43
SMARCD1-212ENST00000551966 FZD8Q9H461 694 aa23.98■■□□□ 1.43
SMARCD1-212ENST00000551966 SNTG2Q9NY99 539 aa23.98■■□□□ 1.43
SMARCD1-212ENST00000551966 DNAH14Q0VDD8 3507 aa23.98■■□□□ 1.43
SMARCD1-212ENST00000551966 WNT7AO00755 349 aa23.97■■□□□ 1.43
SMARCD1-212ENST00000551966 EPB41L2O43491 1005 aaKnown RBP23.97■■□□□ 1.43
SMARCD1-212ENST00000551966 CDKL5O76039 1030 aa23.97■■□□□ 1.43
SMARCD1-212ENST00000551966 FRYLO94915 3013 aa23.97■■□□□ 1.43
SMARCD1-212ENST00000551966 HOXA9P31269 272 aa23.97■■□□□ 1.43
SMARCD1-212ENST00000551966 MLF2Q15773 248 aaPredicted RBP23.97■■□□□ 1.43
SMARCD1-212ENST00000551966 LIN9Q5TKA1 542 aa23.97■■□□□ 1.43
SMARCD1-212ENST00000551966 TTC12Q9H892 705 aaPredicted RBP23.97■■□□□ 1.43
SMARCD1-212ENST00000551966 HCFC1R1Q9NWW0 138 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms