RNA–Protein interactions for RNA: ENST00000551920.1

GCN1-209, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-209ENST00000551920 ITGB1P05556 798 aa17.91■□□□□ 0.46
GCN1-209ENST00000551920 FOSL2P15408 326 aa17.91■□□□□ 0.46
GCN1-209ENST00000551920 LAG3P18627 525 aa17.91■□□□□ 0.46
GCN1-209ENST00000551920 OSTNP61366 133 aa17.91■□□□□ 0.46
GCN1-209ENST00000551920 FAM160A1Q05DH4 1040 aa17.91■□□□□ 0.46
GCN1-209ENST00000551920 SPOUT1Q5T280 376 aaKnown RBP17.91■□□□□ 0.46
GCN1-209ENST00000551920 EPM2AIP1Q7L775 607 aaPredicted RBP17.91■□□□□ 0.46
GCN1-209ENST00000551920 KLHL23Q8NBE8 558 aa17.91■□□□□ 0.46
GCN1-209ENST00000551920 URGCPQ8TCY9 931 aa17.91■□□□□ 0.46
GCN1-209ENST00000551920 BCL7CQ8WUZ0 217 aaPredicted RBP17.91■□□□□ 0.46
GCN1-209ENST00000551920 TCHPQ9BT92 498 aa17.91■□□□□ 0.46
GCN1-209ENST00000551920 C11orf84Q9BUA3 381 aaPredicted RBP17.91■□□□□ 0.46
GCN1-209ENST00000551920 PLVAPQ9BX97 442 aa17.91■□□□□ 0.46
GCN1-209ENST00000551920 GBP3Q9H0R5 595 aa17.91■□□□□ 0.46
GCN1-209ENST00000551920 A0A0B4J269 797 aa17.9■□□□□ 0.46
GCN1-209ENST00000551920 PVALEFA0A1B0GWK0 134 aa17.9■□□□□ 0.46
GCN1-209ENST00000551920 CLDN3O15551 220 aa17.9■□□□□ 0.46
GCN1-209ENST00000551920 PRPF6O94906 941 aaKnown RBP17.9■□□□□ 0.46
GCN1-209ENST00000551920 RB1P06400 928 aa17.9■□□□□ 0.46
GCN1-209ENST00000551920 DNAJB1P25685 340 aa17.9■□□□□ 0.46
GCN1-209ENST00000551920 ADSSP30520 456 aa17.9■□□□□ 0.46
GCN1-209ENST00000551920 ABCD1P33897 745 aa17.9■□□□□ 0.46
GCN1-209ENST00000551920 SLC11A1P49279 550 aa17.9■□□□□ 0.46
GCN1-209ENST00000551920 BCAR1P56945 870 aa17.9■□□□□ 0.46
GCN1-209ENST00000551920 DSC1Q08554 894 aa17.9■□□□□ 0.46
GCN1-209ENST00000551920 DPYDQ12882 1025 aa17.9■□□□□ 0.46
GCN1-209ENST00000551920 GPM6BQ13491 265 aa17.9■□□□□ 0.46
GCN1-209ENST00000551920 CAMK1Q14012 370 aa17.9■□□□□ 0.46
GCN1-209ENST00000551920 CSPP1Q1MSJ5 1256 aa17.9■□□□□ 0.46
GCN1-209ENST00000551920 KCNT2Q6UVM3 1135 aa17.9■□□□□ 0.46
GCN1-209ENST00000551920 CLEC17AQ6ZS10 378 aa17.9■□□□□ 0.46
GCN1-209ENST00000551920 THNSL1Q8IYQ7 743 aa17.9■□□□□ 0.46
GCN1-209ENST00000551920 P2RX5Q93086 422 aa17.9■□□□□ 0.46
GCN1-209ENST00000551920 ALG13Q9NP73 1137 aaKnown RBP17.9■□□□□ 0.46
GCN1-209ENST00000551920 CACNG4Q9UBN1 327 aa17.9■□□□□ 0.46
GCN1-209ENST00000551920 STXBP5LQ9Y2K9 1186 aa17.9■□□□□ 0.46
GCN1-209ENST00000551920 MTCH2Q9Y6C9 303 aa17.9■□□□□ 0.46
GCN1-209ENST00000551920 IGFBP4P22692 258 aa17.89■□□□□ 0.45
GCN1-209ENST00000551920 TNFSF9P41273 254 aa17.89■□□□□ 0.45
GCN1-209ENST00000551920 RNASELQ05823 741 aaKnown RBP17.89■□□□□ 0.45
GCN1-209ENST00000551920 ALCAMQ13740 583 aa17.89■□□□□ 0.45
GCN1-209ENST00000551920 NAB2Q15742 525 aa17.89■□□□□ 0.45
GCN1-209ENST00000551920 KMT5BQ4FZB7 885 aa17.89■□□□□ 0.45
GCN1-209ENST00000551920 GLRA4Q5JXX5 417 aa17.89■□□□□ 0.45
GCN1-209ENST00000551920 APBB1IPQ7Z5R6 666 aaPredicted RBP17.89■□□□□ 0.45
GCN1-209ENST00000551920 COLGALT2Q8IYK4 626 aa17.89■□□□□ 0.45
GCN1-209ENST00000551920 SLC39A11Q8N1S5 342 aa17.89■□□□□ 0.45
GCN1-209ENST00000551920 KIAA0895Q8NCT3 520 aa17.89■□□□□ 0.45
GCN1-209ENST00000551920 SCFD1Q8WVM8 642 aa17.89■□□□□ 0.45
GCN1-209ENST00000551920 SNX27Q96L92 541 aa17.89■□□□□ 0.45
GCN1-209ENST00000551920 ZNF558Q96NG5 402 aa17.89■□□□□ 0.45
GCN1-209ENST00000551920 ACCSQ96QU6 501 aa17.89■□□□□ 0.45
GCN1-209ENST00000551920 GAS2L1Q99501 681 aaPredicted RBP17.89■□□□□ 0.45
GCN1-209ENST00000551920 PCDHB13Q9Y5F0 798 aa17.89■□□□□ 0.45
GCN1-209ENST00000551920 STYXL1Q9Y6J8 313 aa17.89■□□□□ 0.45
GCN1-209ENST00000551920 ATG2AQ2TAZ0 1938 aa17.88■□□□□ 0.45
GCN1-209ENST00000551920 NT5C1B-RDH14C9J2C7 533 aa17.88■□□□□ 0.45
GCN1-209ENST00000551920 F8W810 466 aa17.88■□□□□ 0.45
GCN1-209ENST00000551920 EIF3DO15371 548 aaKnown RBP eCLIP17.88■□□□□ 0.45
GCN1-209ENST00000551920 FGF18O76093 207 aa17.88■□□□□ 0.45
GCN1-209ENST00000551920 CSPG5O95196 566 aa17.88■□□□□ 0.45
GCN1-209ENST00000551920 RPN1P04843 607 aaKnown RBP17.88■□□□□ 0.45
GCN1-209ENST00000551920 MYL1P05976 194 aa17.88■□□□□ 0.45
GCN1-209ENST00000551920 GALTP07902 379 aa17.88■□□□□ 0.45
GCN1-209ENST00000551920 POU3F3P20264 500 aaPredicted RBP17.88■□□□□ 0.45
GCN1-209ENST00000551920 GRIK3Q13003 919 aa17.88■□□□□ 0.45
GCN1-209ENST00000551920 STK4Q13043 487 aa17.88■□□□□ 0.45
GCN1-209ENST00000551920 POSTNQ15063 836 aa17.88■□□□□ 0.45
GCN1-209ENST00000551920 XKR4Q5GH76 650 aa17.88■□□□□ 0.45
GCN1-209ENST00000551920 ALKAL1Q6UXT8 129 aa17.88■□□□□ 0.45
GCN1-209ENST00000551920 SPPL3Q8TCT6 385 aa17.88■□□□□ 0.45
GCN1-209ENST00000551920 ZMAT2Q96NC0 199 aaKnown RBP17.88■□□□□ 0.45
GCN1-209ENST00000551920 CCDC94Q9BW85 323 aaPredicted RBP17.88■□□□□ 0.45
GCN1-209ENST00000551920 SLC39A2Q9NP94 309 aa17.88■□□□□ 0.45
GCN1-209ENST00000551920 AAASQ9NRG9 546 aa17.88■□□□□ 0.45
GCN1-209ENST00000551920 EXOC1Q9NV70 894 aa17.88■□□□□ 0.45
GCN1-209ENST00000551920 KANSL3Q9P2N6 904 aa17.88■□□□□ 0.45
GCN1-209ENST00000551920 PCDHB12Q9Y5F1 795 aa17.88■□□□□ 0.45
GCN1-209ENST00000551920 PLXNA4Q9HCM2 1894 aa17.88■□□□□ 0.45
GCN1-209ENST00000551920 CXCL8P10145 99 aa17.87■□□□□ 0.45
GCN1-209ENST00000551920 MATR3P43243 847 aaKnown RBP eCLIP17.87■□□□□ 0.45
GCN1-209ENST00000551920 PNOCQ13519 176 aa17.87■□□□□ 0.45
GCN1-209ENST00000551920 SLC10A6Q3KNW5 377 aa17.87■□□□□ 0.45
GCN1-209ENST00000551920 ZSWIM2Q8NEG5 633 aa17.87■□□□□ 0.45
GCN1-209ENST00000551920 PPP1R10Q96QC0 940 aaKnown RBP17.87■□□□□ 0.45
GCN1-209ENST00000551920 RPS6KC1Q96S38 1066 aa17.87■□□□□ 0.45
GCN1-209ENST00000551920 MSTO1Q9BUK6 570 aa17.87■□□□□ 0.45
GCN1-209ENST00000551920 VN1R3Q9BXE9 311 aa17.87■□□□□ 0.45
GCN1-209ENST00000551920 MARCH5Q9NX47 278 aa17.87■□□□□ 0.45
GCN1-209ENST00000551920 PCDHGC5Q9Y5F6 944 aa17.87■□□□□ 0.45
GCN1-209ENST00000551920 OGTO15294 1046 aa17.86■□□□□ 0.45
GCN1-209ENST00000551920 IRS1P35568 1242 aa17.86■□□□□ 0.45
GCN1-209ENST00000551920 UBE2HP62256 183 aa17.86■□□□□ 0.45
GCN1-209ENST00000551920 ENOX2Q16206 610 aaKnown RBP17.86■□□□□ 0.45
GCN1-209ENST00000551920 BMT2Q1RMZ1 405 aa17.86■□□□□ 0.45
GCN1-209ENST00000551920 NELFCDQ8IXH7 590 aa17.86■□□□□ 0.45
GCN1-209ENST00000551920 TMEM130Q8N3G9 435 aa17.86■□□□□ 0.45
GCN1-209ENST00000551920 ZNF507Q8TCN5 953 aa17.86■□□□□ 0.45
GCN1-209ENST00000551920 RABGGTAQ92696 567 aa17.86■□□□□ 0.45
GCN1-209ENST00000551920 ERCC4Q92889 916 aaPredicted RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms