RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 LRIT3Q3SXY7 679 aa2.94□□□□□ -1.94
CPSF6-207ENST00000551516 CCDC181Q5TID7 509 aa2.94□□□□□ -1.94
CPSF6-207ENST00000551516 UBE3BQ7Z3V4 1068 aa2.94□□□□□ -1.94
CPSF6-207ENST00000551516 FAM83AQ86UY5 434 aa2.94□□□□□ -1.94
CPSF6-207ENST00000551516 ZBTB46Q86UZ6 589 aa2.94□□□□□ -1.94
CPSF6-207ENST00000551516 PTRH1Q86Y79 214 aaKnown RBP2.94□□□□□ -1.94
CPSF6-207ENST00000551516 APOBEC3FQ8IUX4 373 aaKnown RBP2.94□□□□□ -1.94
CPSF6-207ENST00000551516 FMNL3Q8IVF7 1028 aa2.94□□□□□ -1.94
CPSF6-207ENST00000551516 TRIM48Q8IWZ4 208 aa2.94□□□□□ -1.94
CPSF6-207ENST00000551516 ZZZ3Q8IYH5 903 aa2.94□□□□□ -1.94
CPSF6-207ENST00000551516 TRMT2AQ8IZ69 625 aaKnown RBP2.94□□□□□ -1.94
CPSF6-207ENST00000551516 KIAA1958Q8N8K9 716 aa2.94□□□□□ -1.94
CPSF6-207ENST00000551516 NETO2Q8NC67 525 aa2.94□□□□□ -1.94
CPSF6-207ENST00000551516 UHMK1Q8TAS1 419 aaKnown RBP2.94□□□□□ -1.94
CPSF6-207ENST00000551516 PHOSPHO1Q8TCT1 267 aa2.94□□□□□ -1.94
CPSF6-207ENST00000551516 MYLIPQ8WY64 445 aa2.94□□□□□ -1.94
CPSF6-207ENST00000551516 SEC14L1Q92503 715 aa2.94□□□□□ -1.94
CPSF6-207ENST00000551516 TSR2Q969E8 191 aaKnown RBP2.94□□□□□ -1.94
CPSF6-207ENST00000551516 ZKSCAN4Q969J2 545 aaPredicted RBP2.94□□□□□ -1.94
CPSF6-207ENST00000551516 GCC1Q96CN9 775 aa2.94□□□□□ -1.94
CPSF6-207ENST00000551516 OPTNQ96CV9 577 aa2.94□□□□□ -1.94
CPSF6-207ENST00000551516 SUCLG2Q96I99 432 aa2.94□□□□□ -1.94
CPSF6-207ENST00000551516 SMAD5Q99717 465 aaKnown RBP2.94□□□□□ -1.94
CPSF6-207ENST00000551516 PLCD4Q9BRC7 762 aa2.94□□□□□ -1.94
CPSF6-207ENST00000551516 ASPSCR1Q9BZE9 553 aa2.94□□□□□ -1.94
CPSF6-207ENST00000551516 USP44Q9H0E7 712 aa2.94□□□□□ -1.94
CPSF6-207ENST00000551516 TDRD3Q9H7E2 651 aaKnown RBP2.94□□□□□ -1.94
CPSF6-207ENST00000551516 SMURF1Q9HCE7 757 aa2.94□□□□□ -1.94
CPSF6-207ENST00000551516 CRTAC1Q9NQ79 661 aa2.94□□□□□ -1.94
CPSF6-207ENST00000551516 ACSS2Q9NR19 701 aa2.94□□□□□ -1.94
CPSF6-207ENST00000551516 PCMTD2Q9NV79 361 aa2.94□□□□□ -1.94
CPSF6-207ENST00000551516 MTMR10Q9NXD2 777 aa2.94□□□□□ -1.94
CPSF6-207ENST00000551516 SRRDQ9UH36 339 aa2.94□□□□□ -1.94
CPSF6-207ENST00000551516 DBR1Q9UK59 544 aaKnown RBP2.94□□□□□ -1.94
CPSF6-207ENST00000551516 TRHDEQ9UKU6 1024 aa2.94□□□□□ -1.94
CPSF6-207ENST00000551516 SRPK3Q9UPE1 567 aa2.94□□□□□ -1.94
CPSF6-207ENST00000551516 NOC2LQ9Y3T9 749 aaKnown RBP2.94□□□□□ -1.94
CPSF6-207ENST00000551516 AFG3L2Q9Y4W6 797 aa2.94□□□□□ -1.94
CPSF6-207ENST00000551516 SPO11Q9Y5K1 396 aa2.94□□□□□ -1.94
CPSF6-207ENST00000551516 ATP23Q9Y6H3 246 aa2.94□□□□□ -1.94
CPSF6-207ENST00000551516 RPAP1Q9BWH6 1393 aaPredicted RBP2.94□□□□□ -1.94
CPSF6-207ENST00000551516 GAKO14976 1311 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 PFASO15067 1338 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 IL16Q14005 1332 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 KIF16BQ96L93 1317 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 A0A0G2JLL6 359 aaPredicted RBP2.93□□□□□ -1.94
CPSF6-207ENST00000551516 A0A1W2PPC1 479 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 TCRBV5S4A2TA0A5A2 114 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 E2F8A0AVK6 867 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 KIAA1324LA8MWY0 1029 aaPredicted RBP2.93□□□□□ -1.94
CPSF6-207ENST00000551516 MAN2B1O00754 1011 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 KCNK3O14649 394 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 WDHD1O75717 1129 aaPredicted RBP2.93□□□□□ -1.94
CPSF6-207ENST00000551516 FBXO21O94952 628 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 MED26O95402 600 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 SGPL1O95470 568 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 GLI4P10075 376 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 GJA4P35212 333 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 AFMP43652 599 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 GYG1P46976 350 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 SLC6A11P48066 632 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 NEK2P51955 445 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 CACNB3P54284 484 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 ERVFC1P60507 584 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 GNAI1P63096 354 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 PPATQ06203 517 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 PPIL2Q13356 520 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 PRKG1Q13976 671 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 CNGB1Q14028 1251 aaPredicted RBP2.93□□□□□ -1.94
CPSF6-207ENST00000551516 KIR3DS1Q14943 382 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 NR1I3Q14994 352 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 TMEM132BQ14DG7 1078 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 DLGAP5Q15398 846 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 LRRC24Q50LG9 513 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 FIGNQ5HY92 759 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 EMC4Q5J8M3 183 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 SYDE2Q5VT97 1194 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 BROXQ5VW32 411 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 BTBD8Q5XKL5 378 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 CPZQ66K79 652 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 CC2D1AQ6P1N0 951 aaPredicted RBP2.93□□□□□ -1.94
CPSF6-207ENST00000551516 LMBR1LQ6UX01 489 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 KCTD1Q719H9 257 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 ARMC9Q7Z3E5 817 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 PRRT2Q7Z6L0 340 aaPredicted RBP2.93□□□□□ -1.94
CPSF6-207ENST00000551516 PNPLA5Q7Z6Z6 429 aaPredicted RBP2.93□□□□□ -1.94
CPSF6-207ENST00000551516 ANKRD23Q86SG2 305 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 RASSF3Q86WH2 238 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 ERO1BQ86YB8 467 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 WFDC3Q8IUB2 231 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 SIRT2Q8IXJ6 389 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 ABHD4Q8TB40 342 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 SH3RF2Q8TEC5 729 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 DIS3LQ8TF46 1054 aaKnown RBP2.93□□□□□ -1.94
CPSF6-207ENST00000551516 COG1Q8WTW3 980 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 DNAAF4Q8WXU2 420 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 SLC5A5Q92911 643 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 PEX11GQ96HA9 241 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 ERO1AQ96HE7 468 aa2.93□□□□□ -1.94
CPSF6-207ENST00000551516 AHCYL2Q96HN2 611 aaKnown RBP2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms