RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 PRCPP42785 496 aa23.39■■□□□ 1.33
NEK3-202ENST00000550841 RABGGTBP53611 331 aa23.39■■□□□ 1.33
NEK3-202ENST00000550841 C12orf56Q8IXR9 622 aa23.39■■□□□ 1.33
NEK3-202ENST00000550841 DHTKD1Q96HY7 919 aaPredicted RBP23.39■■□□□ 1.33
NEK3-202ENST00000550841 CASD1Q96PB1 797 aa23.39■■□□□ 1.33
NEK3-202ENST00000550841 MRPL9Q9BYD2 267 aaKnown RBP23.39■■□□□ 1.33
NEK3-202ENST00000550841 KCTD10Q9H3F6 313 aa23.39■■□□□ 1.33
NEK3-202ENST00000550841 SEMA6BQ9H3T3 888 aa23.39■■□□□ 1.33
NEK3-202ENST00000550841 KIAA1586Q9HCI6 787 aa23.39■■□□□ 1.33
NEK3-202ENST00000550841 AGPAT3Q9NRZ7 376 aa23.39■■□□□ 1.33
NEK3-202ENST00000550841 COL6A3P12111 3177 aa23.39■■□□□ 1.33
NEK3-202ENST00000550841 PSMA7O14818 248 aa23.38■■□□□ 1.33
NEK3-202ENST00000550841 OSTNP61366 133 aa23.38■■□□□ 1.33
NEK3-202ENST00000550841 BTG3Q14201 252 aaPredicted RBP23.38■■□□□ 1.33
NEK3-202ENST00000550841 MYBPC2Q14324 1141 aa23.38■■□□□ 1.33
NEK3-202ENST00000550841 NOMO2Q5JPE7 1267 aa23.38■■□□□ 1.33
NEK3-202ENST00000550841 CLLU1OSQ5K130 101 aa23.38■■□□□ 1.33
NEK3-202ENST00000550841 SMYD4Q8IYR2 804 aaPredicted RBP23.38■■□□□ 1.33
NEK3-202ENST00000550841 ADSSL1Q8N142 457 aa23.38■■□□□ 1.33
NEK3-202ENST00000550841 HELQQ8TDG4 1101 aa23.38■■□□□ 1.33
NEK3-202ENST00000550841 RPS6KC1Q96S38 1066 aa23.38■■□□□ 1.33
NEK3-202ENST00000550841 HAPLN2Q9GZV7 340 aa23.38■■□□□ 1.33
NEK3-202ENST00000550841 IKZF4Q9H2S9 585 aa23.38■■□□□ 1.33
NEK3-202ENST00000550841 RPF1Q9H9Y2 349 aaKnown RBP23.38■■□□□ 1.33
NEK3-202ENST00000550841 PLEKHA5Q9HAU0 1116 aa23.38■■□□□ 1.33
NEK3-202ENST00000550841 RNF19AQ9NV58 838 aa23.38■■□□□ 1.33
NEK3-202ENST00000550841 TRAF3IP3Q9Y228 551 aa23.38■■□□□ 1.33
NEK3-202ENST00000550841 TISP43B9A030 160 aa23.37■■□□□ 1.33
NEK3-202ENST00000550841 INPPL1O15357 1258 aa23.37■■□□□ 1.33
NEK3-202ENST00000550841 RECQL4O94761 1208 aa23.37■■□□□ 1.33
NEK3-202ENST00000550841 LETM1O95202 739 aaPredicted RBP23.37■■□□□ 1.33
NEK3-202ENST00000550841 RBM43Q6ZSC3 357 aaKnown RBP23.37■■□□□ 1.33
NEK3-202ENST00000550841 FIBCD1Q8N539 461 aa23.37■■□□□ 1.33
NEK3-202ENST00000550841 MLKLQ8NB16 471 aa23.37■■□□□ 1.33
NEK3-202ENST00000550841 SP7Q8TDD2 431 aaPredicted RBP23.37■■□□□ 1.33
NEK3-202ENST00000550841 TMEM174Q8WUU8 243 aa23.37■■□□□ 1.33
NEK3-202ENST00000550841 TSPAN18Q96SJ8 248 aa23.37■■□□□ 1.33
NEK3-202ENST00000550841 GAD1Q99259 594 aa23.37■■□□□ 1.33
NEK3-202ENST00000550841 CDX2Q99626 313 aaPredicted RBP23.37■■□□□ 1.33
NEK3-202ENST00000550841 TSG101Q99816 390 aa23.37■■□□□ 1.33
NEK3-202ENST00000550841 CBWD1Q9BRT8 395 aa23.37■■□□□ 1.33
NEK3-202ENST00000550841 PBX4Q9BYU1 374 aa23.37■■□□□ 1.33
NEK3-202ENST00000550841 PCIF1Q9H4Z3 704 aa23.37■■□□□ 1.33
NEK3-202ENST00000550841 PTPRSQ13332 1948 aa23.37■■□□□ 1.33
NEK3-202ENST00000550841 ARL5CA6NH57 179 aa23.36■■□□□ 1.33
NEK3-202ENST00000550841 MEIS3P2A8K0S8 358 aa23.36■■□□□ 1.33
NEK3-202ENST00000550841 EXTL3O43909 919 aa23.36■■□□□ 1.33
NEK3-202ENST00000550841 RPL13P26373 211 aaKnown RBP23.36■■□□□ 1.33
NEK3-202ENST00000550841 NFKBIBQ15653 356 aa23.36■■□□□ 1.33
NEK3-202ENST00000550841 CAVIN1Q6NZI2 390 aaKnown RBP23.36■■□□□ 1.33
NEK3-202ENST00000550841 SLC9A9Q8IVB4 645 aa23.36■■□□□ 1.33
NEK3-202ENST00000550841 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.36■■□□□ 1.33
NEK3-202ENST00000550841 CD302Q8IX05 232 aa23.36■■□□□ 1.33
NEK3-202ENST00000550841 GPD1LQ8N335 351 aa23.36■■□□□ 1.33
NEK3-202ENST00000550841 CEP120Q8N960 986 aa23.36■■□□□ 1.33
NEK3-202ENST00000550841 RC3H2Q9HBD1 1191 aaKnown RBP23.36■■□□□ 1.33
NEK3-202ENST00000550841 HSPBP1Q9NZL4 362 aa23.36■■□□□ 1.33
NEK3-202ENST00000550841 DACH1Q9UI36 760 aa23.36■■□□□ 1.33
NEK3-202ENST00000550841 CPSF3Q9UKF6 684 aaKnown RBP23.36■■□□□ 1.33
NEK3-202ENST00000550841 INPP5FQ9Y2H2 1132 aa23.36■■□□□ 1.33
NEK3-202ENST00000550841 CARNS1A5YM72 827 aa23.35■■□□□ 1.33
NEK3-202ENST00000550841 CLIC2O15247 247 aa23.35■■□□□ 1.33
NEK3-202ENST00000550841 BMP6P22004 513 aa23.35■■□□□ 1.33
NEK3-202ENST00000550841 MLH1P40692 756 aa23.35■■□□□ 1.33
NEK3-202ENST00000550841 NLRP12P59046 1061 aa23.35■■□□□ 1.33
NEK3-202ENST00000550841 RNASELQ05823 741 aaKnown RBP23.35■■□□□ 1.33
NEK3-202ENST00000550841 NFIL3Q16649 462 aa23.35■■□□□ 1.33
NEK3-202ENST00000550841 PAN2Q504Q3 1202 aaKnown RBP23.35■■□□□ 1.33
NEK3-202ENST00000550841 CENPPQ6IPU0 288 aa23.35■■□□□ 1.33
NEK3-202ENST00000550841 SASS6Q6UVJ0 657 aa23.35■■□□□ 1.33
NEK3-202ENST00000550841 LRRC43Q8N309 656 aa23.35■■□□□ 1.33
NEK3-202ENST00000550841 XXYLT1Q8NBI6 393 aa23.35■■□□□ 1.33
NEK3-202ENST00000550841 FAM193BQ96PV7 902 aaPredicted RBP23.35■■□□□ 1.33
NEK3-202ENST00000550841 FAM213AQ9BRX8 229 aa23.35■■□□□ 1.33
NEK3-202ENST00000550841 KLK14Q9P0G3 267 aa23.35■■□□□ 1.33
NEK3-202ENST00000550841 TMEM63CQ9P1W3 806 aa23.35■■□□□ 1.33
NEK3-202ENST00000550841 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.35■■□□□ 1.33
NEK3-202ENST00000550841 BICDL2A1A5D9 508 aa23.34■■□□□ 1.33
NEK3-202ENST00000550841 ZNF233A6NK53 670 aa23.34■■□□□ 1.33
NEK3-202ENST00000550841 PPP1R3GB7ZBB8 358 aa23.34■■□□□ 1.33
NEK3-202ENST00000550841 FAM189A1O60320 539 aa23.34■■□□□ 1.33
NEK3-202ENST00000550841 ACOT2P49753 483 aa23.34■■□□□ 1.33
NEK3-202ENST00000550841 GATMP50440 423 aa23.34■■□□□ 1.33
NEK3-202ENST00000550841 EDRF1Q3B7T1 1238 aa23.34■■□□□ 1.33
NEK3-202ENST00000550841 SEZ6Q53EL9 994 aa23.34■■□□□ 1.33
NEK3-202ENST00000550841 ALKAL1Q6UXT8 129 aa23.34■■□□□ 1.33
NEK3-202ENST00000550841 P2RX5Q93086 422 aa23.34■■□□□ 1.33
NEK3-202ENST00000550841 SLC28A3Q9HAS3 691 aa23.34■■□□□ 1.33
NEK3-202ENST00000550841 AAASQ9NRG9 546 aa23.34■■□□□ 1.33
NEK3-202ENST00000550841 DMAC2Q9NW81 257 aa23.34■■□□□ 1.33
NEK3-202ENST00000550841 RWDD3Q9Y3V2 267 aa23.34■■□□□ 1.33
NEK3-202ENST00000550841 FNDC1Q4ZHG4 1894 aaPredicted RBP23.33■■□□□ 1.33
NEK3-202ENST00000550841 EXOC3O60645 756 aa23.33■■□□□ 1.33
NEK3-202ENST00000550841 NR3C1P04150 777 aa23.33■■□□□ 1.33
NEK3-202ENST00000550841 THP07101 528 aa23.33■■□□□ 1.33
NEK3-202ENST00000550841 CCNE1P24864 410 aa23.33■■□□□ 1.33
NEK3-202ENST00000550841 DNAJB2P25686 324 aa23.33■■□□□ 1.33
NEK3-202ENST00000550841 PBX2P40425 430 aa23.33■■□□□ 1.33
NEK3-202ENST00000550841 CYP2J2P51589 502 aa23.33■■□□□ 1.33
NEK3-202ENST00000550841 LRRC63Q05C16 580 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms