RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 NT5C1B-RDH14C9J2C7 533 aa28.4■■■□□ 2.14
CPSF6-205ENST00000550075 ALDH2P05091 517 aa28.4■■■□□ 2.14
CPSF6-205ENST00000550075 DNAJB1P25685 340 aa28.4■■■□□ 2.14
CPSF6-205ENST00000550075 ASIC1P78348 528 aa28.4■■■□□ 2.14
CPSF6-205ENST00000550075 TCEAL5Q5H9L2 206 aa28.4■■■□□ 2.14
CPSF6-205ENST00000550075 MICAL1Q8TDZ2 1067 aa28.4■■■□□ 2.14
CPSF6-205ENST00000550075 STAMQ92783 540 aa28.4■■■□□ 2.14
CPSF6-205ENST00000550075 IGSF21Q96ID5 467 aa28.4■■■□□ 2.14
CPSF6-205ENST00000550075 TRIM9Q9C026 710 aa28.4■■■□□ 2.14
CPSF6-205ENST00000550075 ENTPD7Q9NQZ7 604 aa28.4■■■□□ 2.14
CPSF6-205ENST00000550075 COG5Q9UP83 839 aa28.4■■■□□ 2.14
CPSF6-205ENST00000550075 FAN1Q9Y2M0 1017 aa28.4■■■□□ 2.14
CPSF6-205ENST00000550075 ABLIM1O14639 778 aa28.39■■■□□ 2.14
CPSF6-205ENST00000550075 PFKFB1P16118 471 aa28.39■■■□□ 2.14
CPSF6-205ENST00000550075 MCL1Q07820 350 aa28.39■■■□□ 2.14
CPSF6-205ENST00000550075 DSC1Q08554 894 aa28.39■■■□□ 2.14
CPSF6-205ENST00000550075 CAMK1Q14012 370 aa28.39■■■□□ 2.14
CPSF6-205ENST00000550075 KYAT1Q16773 422 aa28.39■■■□□ 2.14
CPSF6-205ENST00000550075 STXBP4Q6ZWJ1 553 aa28.39■■■□□ 2.14
CPSF6-205ENST00000550075 ZNF720Q7Z2F6 126 aa28.39■■■□□ 2.14
CPSF6-205ENST00000550075 PHF6Q8IWS0 365 aaKnown RBP eCLIP28.39■■■□□ 2.14
CPSF6-205ENST00000550075 COLGALT2Q8IYK4 626 aa28.39■■■□□ 2.14
CPSF6-205ENST00000550075 NGRNQ9NPE2 291 aaKnown RBP28.39■■■□□ 2.14
CPSF6-205ENST00000550075 EXOC7Q9UPT5 735 aa28.39■■■□□ 2.14
CPSF6-205ENST00000550075 A0A1W2PQ27 194 aa28.38■■■□□ 2.13
CPSF6-205ENST00000550075 A0A1W2PQ64 194 aa28.38■■■□□ 2.13
CPSF6-205ENST00000550075 A0A1W2PQD8 194 aa28.38■■■□□ 2.13
CPSF6-205ENST00000550075 NCK2O43639 380 aa28.38■■■□□ 2.13
CPSF6-205ENST00000550075 B4GALT3O60512 393 aa28.38■■■□□ 2.13
CPSF6-205ENST00000550075 THP07101 528 aa28.38■■■□□ 2.13
CPSF6-205ENST00000550075 OR1G1P47890 313 aa28.38■■■□□ 2.13
CPSF6-205ENST00000550075 CNNM4Q6P4Q7 775 aa28.38■■■□□ 2.13
CPSF6-205ENST00000550075 ACAP3Q96P50 834 aa28.38■■■□□ 2.13
CPSF6-205ENST00000550075 MIOSQ9NXC5 875 aa28.38■■■□□ 2.13
CPSF6-205ENST00000550075 PCDHB13Q9Y5F0 798 aa28.38■■■□□ 2.13
CPSF6-205ENST00000550075 EYSQ5T1H1 3165 aa28.38■■■□□ 2.13
CPSF6-205ENST00000550075 CITO14578 2027 aa28.38■■■□□ 2.13
CPSF6-205ENST00000550075 A0A1B0GVL5 298 aa28.37■■■□□ 2.13
CPSF6-205ENST00000550075 FSD2A1L4K1 749 aa28.37■■■□□ 2.13
CPSF6-205ENST00000550075 GCNT3O95395 438 aa28.37■■■□□ 2.13
CPSF6-205ENST00000550075 SLFN14P0C7P3 912 aa28.37■■■□□ 2.13
CPSF6-205ENST00000550075 CEP120Q8N960 986 aa28.37■■■□□ 2.13
CPSF6-205ENST00000550075 GSTCDQ8NEC7 633 aa28.37■■■□□ 2.13
CPSF6-205ENST00000550075 HLA-CQ95604 372 aa28.37■■■□□ 2.13
CPSF6-205ENST00000550075 ZBTB45Q96K62 511 aaPredicted RBP28.37■■■□□ 2.13
CPSF6-205ENST00000550075 C7orf25Q9BPX7 421 aa28.37■■■□□ 2.13
CPSF6-205ENST00000550075 TCF25Q9BQ70 676 aa28.37■■■□□ 2.13
CPSF6-205ENST00000550075 PRG3Q9Y2Y8 225 aaPredicted RBP28.37■■■□□ 2.13
CPSF6-205ENST00000550075 NRP1O14786 923 aa28.36■■■□□ 2.13
CPSF6-205ENST00000550075 IRS1P35568 1242 aa28.36■■■□□ 2.13
CPSF6-205ENST00000550075 OSTNP61366 133 aa28.36■■■□□ 2.13
CPSF6-205ENST00000550075 COASYQ13057 564 aa28.36■■■□□ 2.13
CPSF6-205ENST00000550075 TUSC3Q13454 348 aa28.36■■■□□ 2.13
CPSF6-205ENST00000550075 ZC2HC1CQ53FD0 456 aaPredicted RBP28.36■■■□□ 2.13
CPSF6-205ENST00000550075 TMC7Q7Z402 723 aa28.36■■■□□ 2.13
CPSF6-205ENST00000550075 DDX53Q86TM3 631 aaKnown RBP28.36■■■□□ 2.13
CPSF6-205ENST00000550075 TMEM173Q86WV6 379 aaPredicted RBP28.36■■■□□ 2.13
CPSF6-205ENST00000550075 ACCSQ96QU6 501 aa28.36■■■□□ 2.13
CPSF6-205ENST00000550075 COLEC11Q9BWP8 271 aa28.36■■■□□ 2.13
CPSF6-205ENST00000550075 GDPD2Q9HCC8 539 aa28.36■■■□□ 2.13
CPSF6-205ENST00000550075 TBC1D7Q9P0N9 293 aa28.36■■■□□ 2.13
CPSF6-205ENST00000550075 HPSEQ9Y251 543 aa28.36■■■□□ 2.13
CPSF6-205ENST00000550075 GOLGA6L4A6NEF3 574 aa28.35■■■□□ 2.13
CPSF6-205ENST00000550075 PTGESO14684 152 aa28.35■■■□□ 2.13
CPSF6-205ENST00000550075 FSCN2O14926 492 aa28.35■■■□□ 2.13
CPSF6-205ENST00000550075 PPP1R37O75864 691 aa28.35■■■□□ 2.13
CPSF6-205ENST00000550075 SYKP43405 635 aa28.35■■■□□ 2.13
CPSF6-205ENST00000550075 SMC1AQ14683 1233 aaKnown RBP28.35■■■□□ 2.13
CPSF6-205ENST00000550075 AAK1Q2M2I8 961 aa28.35■■■□□ 2.13
CPSF6-205ENST00000550075 L1TD1Q5T7N2 865 aaKnown RBP28.35■■■□□ 2.13
CPSF6-205ENST00000550075 PLPP4Q5VZY2 271 aa28.35■■■□□ 2.13
CPSF6-205ENST00000550075 SLFN12LQ6IEE8 588 aa28.35■■■□□ 2.13
CPSF6-205ENST00000550075 FSIP1Q8NA03 581 aa28.35■■■□□ 2.13
CPSF6-205ENST00000550075 SNX27Q96L92 541 aa28.35■■■□□ 2.13
CPSF6-205ENST00000550075 PRDM6Q9NQX0 595 aa28.35■■■□□ 2.13
CPSF6-205ENST00000550075 SERTAD1Q9UHV2 236 aa28.35■■■□□ 2.13
CPSF6-205ENST00000550075 FAM237AA0A1B0GTK4 181 aa28.34■■■□□ 2.13
CPSF6-205ENST00000550075 CLTAP09496 248 aa28.34■■■□□ 2.13
CPSF6-205ENST00000550075 AFMP43652 599 aa28.34■■■□□ 2.13
CPSF6-205ENST00000550075 ERVFC1P60507 584 aa28.34■■■□□ 2.13
CPSF6-205ENST00000550075 ATXN2LQ8WWM7 1075 aaKnown RBP28.34■■■□□ 2.13
CPSF6-205ENST00000550075 MSTO1Q9BUK6 570 aa28.34■■■□□ 2.13
CPSF6-205ENST00000550075 UBE2ZQ9H832 354 aaPredicted RBP28.34■■■□□ 2.13
CPSF6-205ENST00000550075 SLC38A7Q9NVC3 462 aa28.34■■■□□ 2.13
CPSF6-205ENST00000550075 BRWD1Q9NSI6 2320 aa28.34■■■□□ 2.13
CPSF6-205ENST00000550075 OGTO15294 1046 aa28.33■■■□□ 2.13
CPSF6-205ENST00000550075 ACTN4O43707 911 aaKnown RBP28.33■■■□□ 2.13
CPSF6-205ENST00000550075 UNC13DQ70J99 1090 aa28.33■■■□□ 2.13
CPSF6-205ENST00000550075 VPS52Q8N1B4 723 aa28.33■■■□□ 2.13
CPSF6-205ENST00000550075 BCL7CQ8WUZ0 217 aaPredicted RBP28.33■■■□□ 2.13
CPSF6-205ENST00000550075 PABPC5Q96DU9 382 aaKnown RBP28.33■■■□□ 2.13
CPSF6-205ENST00000550075 CCDC34Q96HJ3 373 aa28.33■■■□□ 2.13
CPSF6-205ENST00000550075 CDCA3Q99618 268 aaPredicted RBP28.33■■■□□ 2.13
CPSF6-205ENST00000550075 STRA6Q9BX79 667 aa28.33■■■□□ 2.13
CPSF6-205ENST00000550075 TLE6Q9H808 572 aa28.33■■■□□ 2.13
CPSF6-205ENST00000550075 PRUNE2Q8WUY3 3088 aa28.33■■■□□ 2.13
CPSF6-205ENST00000550075 TRIP11Q15643 1979 aa28.32■■■□□ 2.12
CPSF6-205ENST00000550075 MYL1P05976 194 aa28.32■■■□□ 2.12
CPSF6-205ENST00000550075 CA8P35219 290 aa28.32■■■□□ 2.12
CPSF6-205ENST00000550075 HYAL1Q12794 435 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms