RNA–Protein interactions for RNA: ENST00000549935.6

CALCOCO1-217, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 5

Gene CALCOCO1, Length 2,112 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-217ENST00000549935 LMO3Q8TAP4 145 aa13.68□□□□□ -0.22
CALCOCO1-217ENST00000549935 GMCL1Q96IK5 515 aa13.68□□□□□ -0.22
CALCOCO1-217ENST00000549935 TMEM237Q96Q45 408 aa13.68□□□□□ -0.22
CALCOCO1-217ENST00000549935 TXLNGQ9NUQ3 528 aa13.68□□□□□ -0.22
CALCOCO1-217ENST00000549935 CTTNBP2NLQ9P2B4 639 aa13.68□□□□□ -0.22
CALCOCO1-217ENST00000549935 SMCHD1A6NHR9 2005 aa13.68□□□□□ -0.22
CALCOCO1-217ENST00000549935 TTC4O95801 387 aa13.67□□□□□ -0.22
CALCOCO1-217ENST00000549935 FTLP02792 175 aaPredicted RBP13.67□□□□□ -0.22
CALCOCO1-217ENST00000549935 PYGMP11217 842 aa13.67□□□□□ -0.22
CALCOCO1-217ENST00000549935 BCRP11274 1271 aa13.67□□□□□ -0.22
CALCOCO1-217ENST00000549935 GZMAP12544 262 aa13.67□□□□□ -0.22
CALCOCO1-217ENST00000549935 BMP3P12645 472 aa13.67□□□□□ -0.22
CALCOCO1-217ENST00000549935 GNAZP19086 355 aa13.67□□□□□ -0.22
CALCOCO1-217ENST00000549935 MARCKSL1P49006 195 aa13.67□□□□□ -0.22
CALCOCO1-217ENST00000549935 JAG1P78504 1218 aa13.67□□□□□ -0.22
CALCOCO1-217ENST00000549935 CAV1Q03135 178 aa13.67□□□□□ -0.22
CALCOCO1-217ENST00000549935 LRRC14Q15048 493 aa13.67□□□□□ -0.22
CALCOCO1-217ENST00000549935 LONRF1Q17RB8 773 aa13.67□□□□□ -0.22
CALCOCO1-217ENST00000549935 ARHGEF18Q6ZSZ5 1173 aa13.67□□□□□ -0.22
CALCOCO1-217ENST00000549935 SLC9A9Q8IVB4 645 aa13.67□□□□□ -0.22
CALCOCO1-217ENST00000549935 SEPT12Q8IYM1 358 aa13.67□□□□□ -0.22
CALCOCO1-217ENST00000549935 KIF2BQ8N4N8 673 aa13.67□□□□□ -0.22
CALCOCO1-217ENST00000549935 CFAP61Q8NHU2 1237 aa13.67□□□□□ -0.22
CALCOCO1-217ENST00000549935 UHMK1Q8TAS1 419 aaKnown RBP13.67□□□□□ -0.22
CALCOCO1-217ENST00000549935 SH3TC2Q8TF17 1288 aa13.67□□□□□ -0.22
CALCOCO1-217ENST00000549935 LRMDAQ9H2I8 198 aa13.67□□□□□ -0.22
CALCOCO1-217ENST00000549935 SPATS2LQ9NUQ6 558 aaKnown RBP13.67□□□□□ -0.22
CALCOCO1-217ENST00000549935 CTNNAL1Q9UBT7 734 aa13.67□□□□□ -0.22
CALCOCO1-217ENST00000549935 SEL1LQ9UBV2 794 aa13.67□□□□□ -0.22
CALCOCO1-217ENST00000549935 PNMA3Q9UL41 463 aa13.67□□□□□ -0.22
CALCOCO1-217ENST00000549935 SPATA31A6Q5VVP1 1343 aa13.67□□□□□ -0.22
CALCOCO1-217ENST00000549935 ADGRA3Q8IWK6 1321 aa13.67□□□□□ -0.22
CALCOCO1-217ENST00000549935 IGLV3-22A0A075B6J6 115 aa13.67□□□□□ -0.22
CALCOCO1-217ENST00000549935 A8MUI8 341 aa13.67□□□□□ -0.22
CALCOCO1-217ENST00000549935 MAGEB2O15479 319 aa13.67□□□□□ -0.22
CALCOCO1-217ENST00000549935 GH2P01242 217 aa13.67□□□□□ -0.22
CALCOCO1-217ENST00000549935 NPR1P16066 1061 aa13.67□□□□□ -0.22
CALCOCO1-217ENST00000549935 CYP2J2P51589 502 aa13.67□□□□□ -0.22
CALCOCO1-217ENST00000549935 SF3A3Q12874 501 aaKnown RBP eCLIP13.67□□□□□ -0.222e-7■□□□□ 8.8
CALCOCO1-217ENST00000549935 SPDYAQ5MJ70 313 aa13.67□□□□□ -0.22
CALCOCO1-217ENST00000549935 PHLDB3Q6NSJ2 640 aa13.67□□□□□ -0.22
CALCOCO1-217ENST00000549935 CGB2Q6NT52 195 aa13.67□□□□□ -0.22
CALCOCO1-217ENST00000549935 PPP1R21Q6ZMI0 780 aa13.67□□□□□ -0.22
CALCOCO1-217ENST00000549935 FBF1Q8TES7 1133 aa13.67□□□□□ -0.22
CALCOCO1-217ENST00000549935 DYDC2Q96IM9 177 aa13.67□□□□□ -0.22
CALCOCO1-217ENST00000549935 RMDN2Q96LZ7 410 aa13.67□□□□□ -0.22
CALCOCO1-217ENST00000549935 HSD17B14Q9BPX1 270 aa13.67□□□□□ -0.22
CALCOCO1-217ENST00000549935 WDR18Q9BV38 432 aa13.67□□□□□ -0.22
CALCOCO1-217ENST00000549935 IDI2Q9BXS1 227 aa13.67□□□□□ -0.22
CALCOCO1-217ENST00000549935 TMX4Q9H1E5 349 aaPredicted RBP13.67□□□□□ -0.22
CALCOCO1-217ENST00000549935 NRXN2Q9P2S2 1712 aa13.67□□□□□ -0.22
CALCOCO1-217ENST00000549935 GGT7Q9UJ14 662 aa13.67□□□□□ -0.22
CALCOCO1-217ENST00000549935 RPL26L1Q9UNX3 145 aaKnown RBP13.67□□□□□ -0.22
CALCOCO1-217ENST00000549935 FRMD4BQ9Y2L6 1034 aa13.67□□□□□ -0.22
CALCOCO1-217ENST00000549935 FOXN3O00409 490 aaPredicted RBP13.66□□□□□ -0.22
CALCOCO1-217ENST00000549935 FSCN2O14926 492 aa13.66□□□□□ -0.22
CALCOCO1-217ENST00000549935 SKAP2O75563 359 aaPredicted RBP13.66□□□□□ -0.22
CALCOCO1-217ENST00000549935 SLITRK3O94933 977 aa13.66□□□□□ -0.22
CALCOCO1-217ENST00000549935 CFBP00751 764 aa13.66□□□□□ -0.22
CALCOCO1-217ENST00000549935 TRIM49P0CI25 452 aa13.66□□□□□ -0.22
CALCOCO1-217ENST00000549935 TRIM49CP0CI26 452 aa13.66□□□□□ -0.22
CALCOCO1-217ENST00000549935 MAN1A1P33908 653 aa13.66□□□□□ -0.22
CALCOCO1-217ENST00000549935 UBXN2AP68543 259 aa13.66□□□□□ -0.22
CALCOCO1-217ENST00000549935 MYL7Q01449 175 aa13.66□□□□□ -0.22
CALCOCO1-217ENST00000549935 MGAT5Q09328 741 aa13.66□□□□□ -0.22
CALCOCO1-217ENST00000549935 STRN3Q13033 797 aa13.66□□□□□ -0.22
CALCOCO1-217ENST00000549935 MPP2Q14168 576 aa13.66□□□□□ -0.22
CALCOCO1-217ENST00000549935 C1orf186Q6ZWK4 172 aa13.66□□□□□ -0.22
CALCOCO1-217ENST00000549935 OTOP1Q7RTM1 612 aa13.66□□□□□ -0.22
CALCOCO1-217ENST00000549935 RELL1Q8IUW5 271 aa13.66□□□□□ -0.22
CALCOCO1-217ENST00000549935 AGGF1Q8N302 714 aaeCLIP13.66□□□□□ -0.22
CALCOCO1-217ENST00000549935 ANKLE1Q8NAG6 615 aa13.66□□□□□ -0.22
CALCOCO1-217ENST00000549935 TMEM174Q8WUU8 243 aa13.66□□□□□ -0.22
CALCOCO1-217ENST00000549935 INPP5DQ92835 1189 aa13.66□□□□□ -0.22
CALCOCO1-217ENST00000549935 NAF1Q96HR8 494 aaKnown RBP13.66□□□□□ -0.22
CALCOCO1-217ENST00000549935 TGS1Q96RS0 853 aaKnown RBP13.66□□□□□ -0.22
CALCOCO1-217ENST00000549935 DDX23Q9BUQ8 820 aaKnown RBP13.66□□□□□ -0.22
CALCOCO1-217ENST00000549935 PARVGQ9HBI0 331 aa13.66□□□□□ -0.22
CALCOCO1-217ENST00000549935 P4HA2O15460 535 aa13.66□□□□□ -0.22
CALCOCO1-217ENST00000549935 HIP1RO75146 1068 aa13.66□□□□□ -0.22
CALCOCO1-217ENST00000549935 CYP3A4P08684 503 aa13.66□□□□□ -0.22
CALCOCO1-217ENST00000549935 BRAFP15056 766 aa13.66□□□□□ -0.22
CALCOCO1-217ENST00000549935 CREB1P16220 341 aa13.66□□□□□ -0.22
CALCOCO1-217ENST00000549935 ABL2P42684 1182 aa13.66□□□□□ -0.22
CALCOCO1-217ENST00000549935 YARSP54577 528 aaKnown RBP13.66□□□□□ -0.22
CALCOCO1-217ENST00000549935 SLC27A3Q5K4L6 730 aa13.66□□□□□ -0.22
CALCOCO1-217ENST00000549935 STXBP4Q6ZWJ1 553 aa13.66□□□□□ -0.22
CALCOCO1-217ENST00000549935 HS2ST1Q7LGA3 356 aa13.66□□□□□ -0.22
CALCOCO1-217ENST00000549935 PODNQ7Z5L7 613 aa13.66□□□□□ -0.22
CALCOCO1-217ENST00000549935 ECHDC2Q86YB7 292 aa13.66□□□□□ -0.22
CALCOCO1-217ENST00000549935 FIZ1Q96SL8 496 aa13.66□□□□□ -0.22
CALCOCO1-217ENST00000549935 SH3GL3Q99963 347 aa13.66□□□□□ -0.22
CALCOCO1-217ENST00000549935 RNPEPL1Q9HAU8 725 aa13.66□□□□□ -0.22
CALCOCO1-217ENST00000549935 SEPT11Q9NVA2 429 aaKnown RBP13.66□□□□□ -0.22
CALCOCO1-217ENST00000549935 PRR12Q9ULL5 1215 aa13.66□□□□□ -0.22
CALCOCO1-217ENST00000549935 STK38LQ9Y2H1 464 aa13.66□□□□□ -0.22
CALCOCO1-217ENST00000549935 USP20Q9Y2K6 914 aa13.66□□□□□ -0.22
CALCOCO1-217ENST00000549935 STARD13Q9Y3M8 1113 aa13.66□□□□□ -0.22
CALCOCO1-217ENST00000549935 A0A1W2PRG0 241 aa13.65□□□□□ -0.22
CALCOCO1-217ENST00000549935 TCRBV7S2A1N4TA0A589 114 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms