RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 DYDC1Q8WWB3 177 aa11.93□□□□□ -0.5
LINC00661-204ENST00000549354 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.93□□□□□ -0.5
LINC00661-204ENST00000549354 PI4K2AQ9BTU6 479 aa11.93□□□□□ -0.5
LINC00661-204ENST00000549354 EDEM3Q9BZQ6 932 aa11.93□□□□□ -0.5
LINC00661-204ENST00000549354 KCNH4Q9UQ05 1017 aa11.93□□□□□ -0.5
LINC00661-204ENST00000549354 NFASCO94856 1347 aa11.92□□□□□ -0.5
LINC00661-204ENST00000549354 MAPTP10636 758 aaKnown RBP11.92□□□□□ -0.5
LINC00661-204ENST00000549354 HSPA9P38646 679 aaKnown RBP11.92□□□□□ -0.5
LINC00661-204ENST00000549354 KRT76Q01546 638 aa11.92□□□□□ -0.5
LINC00661-204ENST00000549354 MAPK7Q13164 816 aa11.92□□□□□ -0.5
LINC00661-204ENST00000549354 TCP11Q8WWU5 503 aa11.92□□□□□ -0.5
LINC00661-204ENST00000549354 KRT35Q92764 455 aa11.92□□□□□ -0.5
LINC00661-204ENST00000549354 LRRC45Q96CN5 670 aa11.92□□□□□ -0.5
LINC00661-204ENST00000549354 C18orf8Q96DM3 657 aa11.92□□□□□ -0.5
LINC00661-204ENST00000549354 CXorf56Q9H5V9 222 aa11.92□□□□□ -0.5
LINC00661-204ENST00000549354 ERVK-5Q9HDB9 667 aa11.92□□□□□ -0.5
LINC00661-204ENST00000549354 KCNK9Q9NPC2 374 aa11.92□□□□□ -0.5
LINC00661-204ENST00000549354 A1CFQ9NQ94 594 aaKnown RBP11.92□□□□□ -0.5
LINC00661-204ENST00000549354 UTP11Q9Y3A2 253 aaKnown RBP11.92□□□□□ -0.5
LINC00661-204ENST00000549354 CSADQ9Y600 493 aa11.92□□□□□ -0.5
LINC00661-204ENST00000549354 SCN4AP35499 1836 aa11.92□□□□□ -0.5
LINC00661-204ENST00000549354 DDX3XO00571 662 aaKnown RBP eCLIP11.92□□□□□ -0.5
LINC00661-204ENST00000549354 QARSP47897 775 aaKnown RBP11.92□□□□□ -0.5
LINC00661-204ENST00000549354 PPP2R2AP63151 447 aa11.92□□□□□ -0.5
LINC00661-204ENST00000549354 MAP2K1Q02750 393 aaPredicted RBP11.92□□□□□ -0.5
LINC00661-204ENST00000549354 DPY19L2Q6NUT2 758 aa11.92□□□□□ -0.5
LINC00661-204ENST00000549354 DLK2Q6UY11 383 aa11.92□□□□□ -0.5
LINC00661-204ENST00000549354 CACNA2D3Q8IZS8 1091 aa11.92□□□□□ -0.5
LINC00661-204ENST00000549354 GIMAP7Q8NHV1 300 aa11.92□□□□□ -0.5
LINC00661-204ENST00000549354 GDAP1Q8TB36 358 aa11.92□□□□□ -0.5
LINC00661-204ENST00000549354 C1orf54Q8WWF1 131 aa11.92□□□□□ -0.5
LINC00661-204ENST00000549354 IWS1Q96ST2 819 aa11.92□□□□□ -0.5
LINC00661-204ENST00000549354 TACO1Q9BSH4 297 aaKnown RBP11.92□□□□□ -0.5
LINC00661-204ENST00000549354 PARVGQ9HBI0 331 aa11.92□□□□□ -0.5
LINC00661-204ENST00000549354 TYW1Q9NV66 732 aaKnown RBP11.92□□□□□ -0.5
LINC00661-204ENST00000549354 RNF14Q9UBS8 474 aa11.92□□□□□ -0.5
LINC00661-204ENST00000549354 SPDYE5A6NIY4 337 aa11.91□□□□□ -0.5
LINC00661-204ENST00000549354 FOXN3O00409 490 aaPredicted RBP11.91□□□□□ -0.5
LINC00661-204ENST00000549354 ATP9AO75110 1047 aa11.91□□□□□ -0.5
LINC00661-204ENST00000549354 RGS20O76081 388 aa11.91□□□□□ -0.5
LINC00661-204ENST00000549354 CLTAP09496 248 aa11.91□□□□□ -0.5
LINC00661-204ENST00000549354 IFI35P80217 286 aaPredicted RBP11.91□□□□□ -0.5
LINC00661-204ENST00000549354 PPP1R7Q15435 360 aa11.91□□□□□ -0.5
LINC00661-204ENST00000549354 TREML2Q5T2D2 321 aa11.91□□□□□ -0.5
LINC00661-204ENST00000549354 EP400NLQ6ZTU2 488 aa11.91□□□□□ -0.5
LINC00661-204ENST00000549354 FRMD5Q7Z6J6 570 aa11.91□□□□□ -0.5
LINC00661-204ENST00000549354 NLRX1Q86UT6 975 aa11.91□□□□□ -0.5
LINC00661-204ENST00000549354 VPS36Q86VN1 386 aa11.91□□□□□ -0.5
LINC00661-204ENST00000549354 ERO1BQ86YB8 467 aa11.91□□□□□ -0.5
LINC00661-204ENST00000549354 RIOX2Q8IUF8 465 aa11.91□□□□□ -0.5
LINC00661-204ENST00000549354 DNERQ8NFT8 737 aa11.91□□□□□ -0.5
LINC00661-204ENST00000549354 CDCA5Q96FF9 252 aa11.91□□□□□ -0.5
LINC00661-204ENST00000549354 TIPINQ9BVW5 301 aa11.91□□□□□ -0.5
LINC00661-204ENST00000549354 TCRBV7S2A1N4TA0A589 114 aa11.91□□□□□ -0.5
LINC00661-204ENST00000549354 SPOPO43791 374 aa11.91□□□□□ -0.5
LINC00661-204ENST00000549354 CCNE2O96020 404 aa11.91□□□□□ -0.5
LINC00661-204ENST00000549354 KRT5P13647 590 aa11.91□□□□□ -0.5
LINC00661-204ENST00000549354 SMAD1Q15797 465 aaKnown RBP11.91□□□□□ -0.5
LINC00661-204ENST00000549354 HIBCHQ6NVY1 386 aaPredicted RBP11.91□□□□□ -0.5
LINC00661-204ENST00000549354 ZNF720Q7Z2F6 126 aa11.91□□□□□ -0.5
LINC00661-204ENST00000549354 PASD1Q8IV76 773 aa11.91□□□□□ -0.5
LINC00661-204ENST00000549354 ANKRD13AQ8IZ07 590 aa11.91□□□□□ -0.5
LINC00661-204ENST00000549354 DAW1Q8N136 415 aa11.91□□□□□ -0.5
LINC00661-204ENST00000549354 ARFGAP2Q8N6H7 521 aa11.91□□□□□ -0.5
LINC00661-204ENST00000549354 ATG4AQ8WYN0 398 aa11.91□□□□□ -0.5
LINC00661-204ENST00000549354 DHX38Q92620 1227 aaKnown RBP11.91□□□□□ -0.5
LINC00661-204ENST00000549354 CEP89Q96ST8 783 aa11.91□□□□□ -0.5
LINC00661-204ENST00000549354 AIPL1Q9NZN9 384 aa11.91□□□□□ -0.5
LINC00661-204ENST00000549354 PDE4DIPQ5VU43 2346 aa11.91□□□□□ -0.5
LINC00661-204ENST00000549354 ZMYM2Q9UBW7 1377 aa11.91□□□□□ -0.5
LINC00661-204ENST00000549354 ASTN1O14525 1302 aa11.91□□□□□ -0.5
LINC00661-204ENST00000549354 H0YGN5 161 aa11.91□□□□□ -0.5
LINC00661-204ENST00000549354 K7ENM7 598 aa11.91□□□□□ -0.5
LINC00661-204ENST00000549354 SLC16A3O15427 465 aaKnown RBP11.91□□□□□ -0.5
LINC00661-204ENST00000549354 CALUO43852 315 aaPredicted RBP11.91□□□□□ -0.5
LINC00661-204ENST00000549354 KCNA2P16389 499 aa11.91□□□□□ -0.5
LINC00661-204ENST00000549354 NPEPPSP55786 919 aa11.91□□□□□ -0.5
LINC00661-204ENST00000549354 CCDC105Q8IYK2 499 aa11.91□□□□□ -0.5
LINC00661-204ENST00000549354 ACSF2Q96CM8 615 aaPredicted RBP11.91□□□□□ -0.5
LINC00661-204ENST00000549354 FMO2Q99518 471 aa11.91□□□□□ -0.5
LINC00661-204ENST00000549354 ELAC2Q9BQ52 826 aaKnown RBP11.91□□□□□ -0.5
LINC00661-204ENST00000549354 NUCKS1Q9H1E3 243 aaKnown RBP11.91□□□□□ -0.5
LINC00661-204ENST00000549354 TOPORSQ9NS56 1045 aaPredicted RBP11.91□□□□□ -0.5
LINC00661-204ENST00000549354 ANKEF1Q9NU02 776 aa11.91□□□□□ -0.5
LINC00661-204ENST00000549354 NFS1Q9Y697 457 aa11.91□□□□□ -0.5
LINC00661-204ENST00000549354 WDR64B1ANS9 1081 aa11.9□□□□□ -0.5
LINC00661-204ENST00000549354 SPATA31C2B4DYI2 1134 aa11.9□□□□□ -0.5
LINC00661-204ENST00000549354 TGFB1I1O43294 461 aa11.9□□□□□ -0.5
LINC00661-204ENST00000549354 GJB6O95452 261 aa11.9□□□□□ -0.5
LINC00661-204ENST00000549354 ICAM3P32942 547 aa11.9□□□□□ -0.5
LINC00661-204ENST00000549354 EPHX2P34913 555 aa11.9□□□□□ -0.5
LINC00661-204ENST00000549354 PSMC4P43686 418 aa11.9□□□□□ -0.5
LINC00661-204ENST00000549354 MOGSQ13724 837 aa11.9□□□□□ -0.5
LINC00661-204ENST00000549354 SEZ6Q53EL9 994 aa11.9□□□□□ -0.5
LINC00661-204ENST00000549354 HS2ST1Q7LGA3 356 aa11.9□□□□□ -0.5
LINC00661-204ENST00000549354 TMC3Q7Z5M5 1100 aa11.9□□□□□ -0.5
LINC00661-204ENST00000549354 FBXO25Q8TCJ0 367 aa11.9□□□□□ -0.5
LINC00661-204ENST00000549354 SCFD2Q8WU76 684 aa11.9□□□□□ -0.5
LINC00661-204ENST00000549354 HAUS1Q96CS2 278 aa11.9□□□□□ -0.5
LINC00661-204ENST00000549354 CDHR1Q96JP9 859 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms