RNA–Protein interactions for RNA: ENST00000549341.1

DEPDC4-208, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 541 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-208ENST00000549341 CYP3A4P08684 503 aa7.86□□□□□ -1.15
DEPDC4-208ENST00000549341 AOC1P19801 751 aa7.86□□□□□ -1.15
DEPDC4-208ENST00000549341 CIITAP33076 1130 aa7.86□□□□□ -1.15
DEPDC4-208ENST00000549341 PBX3P40426 434 aa7.86□□□□□ -1.15
DEPDC4-208ENST00000549341 PPP1R2P41236 205 aa7.86□□□□□ -1.15
DEPDC4-208ENST00000549341 HSD17B4P51659 736 aa7.86□□□□□ -1.15
DEPDC4-208ENST00000549341 MRPS6P82932 125 aaKnown RBP7.86□□□□□ -1.15
DEPDC4-208ENST00000549341 UBE3AQ05086 875 aa7.86□□□□□ -1.15
DEPDC4-208ENST00000549341 GRIK4Q16099 956 aa7.86□□□□□ -1.15
DEPDC4-208ENST00000549341 GNPTABQ3T906 1256 aa7.86□□□□□ -1.15
DEPDC4-208ENST00000549341 RARS2Q5T160 578 aaKnown RBP7.86□□□□□ -1.15
DEPDC4-208ENST00000549341 TMEM151AQ8N4L1 468 aa7.86□□□□□ -1.15
DEPDC4-208ENST00000549341 DCLK2Q8N568 766 aa7.86□□□□□ -1.15
DEPDC4-208ENST00000549341 PDILTQ8N807 584 aa7.86□□□□□ -1.15
DEPDC4-208ENST00000549341 MLKLQ8NB16 471 aa7.86□□□□□ -1.15
DEPDC4-208ENST00000549341 COLGALT1Q8NBJ5 622 aa7.86□□□□□ -1.15
DEPDC4-208ENST00000549341 CASP10Q92851 521 aa7.86□□□□□ -1.15
DEPDC4-208ENST00000549341 EPSTI1Q96J88 318 aa7.86□□□□□ -1.15
DEPDC4-208ENST00000549341 NECTIN4Q96NY8 510 aa7.86□□□□□ -1.15
DEPDC4-208ENST00000549341 GSDMAQ96QA5 445 aa7.86□□□□□ -1.15
DEPDC4-208ENST00000549341 GPR20Q99678 358 aa7.86□□□□□ -1.15
DEPDC4-208ENST00000549341 BPIFA3Q9BQP9 254 aa7.86□□□□□ -1.15
DEPDC4-208ENST00000549341 TMEM60Q9H2L4 133 aa7.86□□□□□ -1.15
DEPDC4-208ENST00000549341 DISC1Q9NRI5 854 aa7.86□□□□□ -1.15
DEPDC4-208ENST00000549341 LRWD1Q9UFC0 647 aa7.86□□□□□ -1.15
DEPDC4-208ENST00000549341 DBR1Q9UK59 544 aaKnown RBP7.86□□□□□ -1.15
DEPDC4-208ENST00000549341 GINS2Q9Y248 185 aa7.86□□□□□ -1.15
DEPDC4-208ENST00000549341 ATG2AQ2TAZ0 1938 aa7.86□□□□□ -1.15
DEPDC4-208ENST00000549341 RALGAPA2Q2PPJ7 1873 aa7.85□□□□□ -1.15
DEPDC4-208ENST00000549341 GOLGA6L6A8MZA4 724 aa7.85□□□□□ -1.15
DEPDC4-208ENST00000549341 RNF225M0QZC1 329 aaPredicted RBP7.85□□□□□ -1.15
DEPDC4-208ENST00000549341 OPLAHO14841 1288 aa7.85□□□□□ -1.15
DEPDC4-208ENST00000549341 FSCN2O14926 492 aa7.85□□□□□ -1.15
DEPDC4-208ENST00000549341 TDP2O95551 362 aa7.85□□□□□ -1.15
DEPDC4-208ENST00000549341 HOXB8P17481 243 aaPredicted RBP7.85□□□□□ -1.15
DEPDC4-208ENST00000549341 PLCB2Q00722 1185 aa7.85□□□□□ -1.15
DEPDC4-208ENST00000549341 STIM1Q13586 685 aa7.85□□□□□ -1.15
DEPDC4-208ENST00000549341 XRRA1Q6P2D8 792 aa7.85□□□□□ -1.15
DEPDC4-208ENST00000549341 VSIG10LQ86VR7 867 aa7.85□□□□□ -1.15
DEPDC4-208ENST00000549341 C12orf76Q8N812 135 aaPredicted RBP7.85□□□□□ -1.15
DEPDC4-208ENST00000549341 MBOAT7Q96N66 472 aa7.85□□□□□ -1.15
DEPDC4-208ENST00000549341 MTMR9Q96QG7 549 aa7.85□□□□□ -1.15
DEPDC4-208ENST00000549341 FTHL17Q9BXU8 183 aa7.85□□□□□ -1.15
DEPDC4-208ENST00000549341 PANK2Q9BZ23 570 aa7.85□□□□□ -1.15
DEPDC4-208ENST00000549341 DNAJC25Q9H1X3 360 aa7.85□□□□□ -1.15
DEPDC4-208ENST00000549341 TTC12Q9H892 705 aaPredicted RBP7.85□□□□□ -1.15
DEPDC4-208ENST00000549341 ERVK-5Q9HDB9 667 aa7.85□□□□□ -1.15
DEPDC4-208ENST00000549341 HCFC2Q9Y5Z7 792 aa7.85□□□□□ -1.15
DEPDC4-208ENST00000549341 NLRC5Q86WI3 1866 aa7.85□□□□□ -1.15
DEPDC4-208ENST00000549341 FAM208BQ5VWN6 2430 aa7.84□□□□□ -1.15
DEPDC4-208ENST00000549341 DENND3A2RUS2 1198 aa7.84□□□□□ -1.15
DEPDC4-208ENST00000549341 PTMAP06454 111 aaKnown RBP7.84□□□□□ -1.15
DEPDC4-208ENST00000549341 CCNYL3P0C7X3 344 aa7.84□□□□□ -1.15
DEPDC4-208ENST00000549341 TGFB3P10600 412 aa7.84□□□□□ -1.15
DEPDC4-208ENST00000549341 FGFR1P11362 822 aa7.84□□□□□ -1.15
DEPDC4-208ENST00000549341 NPR3P17342 541 aa7.84□□□□□ -1.15
DEPDC4-208ENST00000549341 LAG3P18627 525 aa7.84□□□□□ -1.15
DEPDC4-208ENST00000549341 VARSP26640 1264 aaKnown RBP7.84□□□□□ -1.15
DEPDC4-208ENST00000549341 TCF7P36402 384 aaPredicted RBP7.84□□□□□ -1.15
DEPDC4-208ENST00000549341 MTHFRP42898 656 aa7.84□□□□□ -1.15
DEPDC4-208ENST00000549341 AFMP43652 599 aa7.84□□□□□ -1.15
DEPDC4-208ENST00000549341 ADAM17P78536 824 aa7.84□□□□□ -1.15
DEPDC4-208ENST00000549341 GHRHRQ02643 423 aa7.84□□□□□ -1.15
DEPDC4-208ENST00000549341 GRIN1Q05586 938 aa7.84□□□□□ -1.15
DEPDC4-208ENST00000549341 ITIH3Q06033 890 aa7.84□□□□□ -1.15
DEPDC4-208ENST00000549341 PNOCQ13519 176 aa7.84□□□□□ -1.15
DEPDC4-208ENST00000549341 NEDD9Q14511 834 aa7.84□□□□□ -1.15
DEPDC4-208ENST00000549341 DHX8Q14562 1220 aaKnown RBP7.84□□□□□ -1.15
DEPDC4-208ENST00000549341 PRR16Q569H4 304 aa7.84□□□□□ -1.15
DEPDC4-208ENST00000549341 FAM102BQ5T8I3 360 aa7.84□□□□□ -1.15
DEPDC4-208ENST00000549341 ZC3H14Q6PJT7 736 aaKnown RBP7.84□□□□□ -1.15
DEPDC4-208ENST00000549341 SV2BQ7L1I2 683 aa7.84□□□□□ -1.15
DEPDC4-208ENST00000549341 NIPA1Q7RTP0 329 aa7.84□□□□□ -1.15
DEPDC4-208ENST00000549341 TMC7Q7Z402 723 aa7.84□□□□□ -1.15
DEPDC4-208ENST00000549341 RTN4RL1Q86UN2 441 aaPredicted RBP7.84□□□□□ -1.15
DEPDC4-208ENST00000549341 PLA2G4DQ86XP0 818 aa7.84□□□□□ -1.15
DEPDC4-208ENST00000549341 IGSF22Q8N9C0 903 aa7.84□□□□□ -1.15
DEPDC4-208ENST00000549341 SNX29Q8TEQ0 813 aa7.84□□□□□ -1.15
DEPDC4-208ENST00000549341 RUBCNQ92622 972 aa7.84□□□□□ -1.15
DEPDC4-208ENST00000549341 GLG1Q92896 1179 aa7.84□□□□□ -1.15
DEPDC4-208ENST00000549341 PAGE5Q96GU1 130 aa7.84□□□□□ -1.15
DEPDC4-208ENST00000549341 ADAM7Q9H2U9 754 aa7.84□□□□□ -1.15
DEPDC4-208ENST00000549341 CBX8Q9HC52 389 aa7.84□□□□□ -1.15
DEPDC4-208ENST00000549341 TYW1Q9NV66 732 aaKnown RBP7.84□□□□□ -1.15
DEPDC4-208ENST00000549341 DLL3Q9NYJ7 618 aa7.84□□□□□ -1.15
DEPDC4-208ENST00000549341 PUF60Q9UHX1 559 aaKnown RBP7.84□□□□□ -1.15
DEPDC4-208ENST00000549341 PADI3Q9ULW8 664 aa7.84□□□□□ -1.15
DEPDC4-208ENST00000549341 PCDHB7Q9Y5E2 793 aa7.84□□□□□ -1.15
DEPDC4-208ENST00000549341 PCDHA5Q9Y5H7 936 aa7.84□□□□□ -1.15
DEPDC4-208ENST00000549341 TRPV2Q9Y5S1 764 aa7.84□□□□□ -1.15
DEPDC4-208ENST00000549341 BIN1O00499 593 aa7.83□□□□□ -1.16
DEPDC4-208ENST00000549341 IKBKBO14920 756 aa7.83□□□□□ -1.16
DEPDC4-208ENST00000549341 ADAMTS3O15072 1205 aa7.83□□□□□ -1.16
DEPDC4-208ENST00000549341 CBFA2T2O43439 604 aa7.83□□□□□ -1.16
DEPDC4-208ENST00000549341 SLC37A4O43826 429 aa7.83□□□□□ -1.16
DEPDC4-208ENST00000549341 STAM2O75886 525 aa7.83□□□□□ -1.16
DEPDC4-208ENST00000549341 ADH1CP00326 375 aa7.83□□□□□ -1.16
DEPDC4-208ENST00000549341 TPM3P06753 285 aa7.83□□□□□ -1.16
DEPDC4-208ENST00000549341 MUTP22033 750 aa7.83□□□□□ -1.16
DEPDC4-208ENST00000549341 CCT6AP40227 531 aaKnown RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms