RNA–Protein interactions for RNA: ENST00000549034.1

RAB5B-205, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-205ENST00000549034 GLIS3Q8NEA6 775 aa10.5□□□□□ -0.73
RAB5B-205ENST00000549034 ERCC4Q92889 916 aaPredicted RBP10.5□□□□□ -0.73
RAB5B-205ENST00000549034 KCNN1Q92952 543 aa10.5□□□□□ -0.73
RAB5B-205ENST00000549034 HVCN1Q96D96 273 aa10.5□□□□□ -0.73
RAB5B-205ENST00000549034 SAMD11Q96NU1 681 aa10.5□□□□□ -0.73
RAB5B-205ENST00000549034 HAPLN2Q9GZV7 340 aa10.5□□□□□ -0.73
RAB5B-205ENST00000549034 GBP3Q9H0R5 595 aa10.5□□□□□ -0.73
RAB5B-205ENST00000549034 IKZF4Q9H2S9 585 aa10.5□□□□□ -0.73
RAB5B-205ENST00000549034 PRDM12Q9H4Q4 367 aa10.5□□□□□ -0.73
RAB5B-205ENST00000549034 CWH43Q9H720 699 aa10.5□□□□□ -0.73
RAB5B-205ENST00000549034 RC3H2Q9HBD1 1191 aaKnown RBP10.5□□□□□ -0.73
RAB5B-205ENST00000549034 AAASQ9NRG9 546 aa10.5□□□□□ -0.73
RAB5B-205ENST00000549034 RWDD3Q9Y3V2 267 aa10.5□□□□□ -0.73
RAB5B-205ENST00000549034 PCDHB12Q9Y5F1 795 aa10.5□□□□□ -0.73
RAB5B-205ENST00000549034 TDRD15B5MCY1 1934 aaKnown RBP10.49□□□□□ -0.73
RAB5B-205ENST00000549034 TISP43B9A030 160 aa10.49□□□□□ -0.73
RAB5B-205ENST00000549034 ABLIM1O14639 778 aa10.49□□□□□ -0.73
RAB5B-205ENST00000549034 PPP1R37O75864 691 aa10.49□□□□□ -0.73
RAB5B-205ENST00000549034 GABBR2O75899 941 aa10.49□□□□□ -0.73
RAB5B-205ENST00000549034 SMC2O95347 1197 aa10.49□□□□□ -0.73
RAB5B-205ENST00000549034 PIGRP01833 764 aa10.49□□□□□ -0.73
RAB5B-205ENST00000549034 ALDH2P05091 517 aa10.49□□□□□ -0.73
RAB5B-205ENST00000549034 CTNNB1P35222 781 aa10.49□□□□□ -0.73
RAB5B-205ENST00000549034 MLH1P40692 756 aa10.49□□□□□ -0.73
RAB5B-205ENST00000549034 GRM5P41594 1212 aa10.49□□□□□ -0.73
RAB5B-205ENST00000549034 MCL1Q07820 350 aa10.49□□□□□ -0.73
RAB5B-205ENST00000549034 STK4Q13043 487 aa10.49□□□□□ -0.73
RAB5B-205ENST00000549034 GPM6BQ13491 265 aa10.49□□□□□ -0.73
RAB5B-205ENST00000549034 NOLC1Q14978 699 aaKnown RBP eCLIP10.49□□□□□ -0.73
RAB5B-205ENST00000549034 ZNF280BQ86YH2 543 aa10.49□□□□□ -0.73
RAB5B-205ENST00000549034 NELFCDQ8IXH7 590 aa10.49□□□□□ -0.73
RAB5B-205ENST00000549034 CEP120Q8N960 986 aa10.49□□□□□ -0.73
RAB5B-205ENST00000549034 FBXO22Q8NEZ5 403 aa10.49□□□□□ -0.73
RAB5B-205ENST00000549034 NOC3LQ8WTT2 800 aaKnown RBP10.49□□□□□ -0.73
RAB5B-205ENST00000549034 POMGNT1Q8WZA1 660 aa10.49□□□□□ -0.73
RAB5B-205ENST00000549034 ZFP42Q96MM3 310 aa10.49□□□□□ -0.73
RAB5B-205ENST00000549034 RPS6KC1Q96S38 1066 aa10.49□□□□□ -0.73
RAB5B-205ENST00000549034 MSTO1Q9BUK6 570 aa10.49□□□□□ -0.73
RAB5B-205ENST00000549034 MRPL9Q9BYD2 267 aaKnown RBP10.49□□□□□ -0.73
RAB5B-205ENST00000549034 PCIF1Q9H4Z3 704 aa10.49□□□□□ -0.73
RAB5B-205ENST00000549034 NRDE2Q9H7Z3 1164 aa10.49□□□□□ -0.73
RAB5B-205ENST00000549034 LMBRD1Q9NUN5 540 aa10.49□□□□□ -0.73
RAB5B-205ENST00000549034 TBC1D13Q9NVG8 400 aa10.49□□□□□ -0.73
RAB5B-205ENST00000549034 HCSTQ9UBK5 93 aa10.49□□□□□ -0.73
RAB5B-205ENST00000549034 NLRC5Q86WI3 1866 aa10.49□□□□□ -0.73
RAB5B-205ENST00000549034 A0A0B4J269 797 aa10.48□□□□□ -0.73
RAB5B-205ENST00000549034 NT5C1B-RDH14C9J2C7 533 aa10.48□□□□□ -0.73
RAB5B-205ENST00000549034 OGTO15294 1046 aa10.48□□□□□ -0.73
RAB5B-205ENST00000549034 EIF3DO15371 548 aaKnown RBP eCLIP10.48□□□□□ -0.73
RAB5B-205ENST00000549034 RECQL4O94761 1208 aa10.48□□□□□ -0.73
RAB5B-205ENST00000549034 DDHD2O94830 711 aa10.48□□□□□ -0.73
RAB5B-205ENST00000549034 RHOBTB3O94955 611 aa10.48□□□□□ -0.73
RAB5B-205ENST00000549034 RB1P06400 928 aa10.48□□□□□ -0.73
RAB5B-205ENST00000549034 THP07101 528 aa10.48□□□□□ -0.73
RAB5B-205ENST00000549034 LAG3P18627 525 aa10.48□□□□□ -0.73
RAB5B-205ENST00000549034 IGFBP4P22692 258 aa10.48□□□□□ -0.73
RAB5B-205ENST00000549034 ALDH7A1P49419 539 aaKnown RBP10.48□□□□□ -0.73
RAB5B-205ENST00000549034 SCNN1GP51170 649 aa10.48□□□□□ -0.73
RAB5B-205ENST00000549034 BCAR1P56945 870 aa10.48□□□□□ -0.73
RAB5B-205ENST00000549034 EHHADHQ08426 723 aa10.48□□□□□ -0.73
RAB5B-205ENST00000549034 CAMK4Q16566 473 aa10.48□□□□□ -0.73
RAB5B-205ENST00000549034 ISM2Q6H9L7 571 aa10.48□□□□□ -0.73
RAB5B-205ENST00000549034 SLC39A4Q6P5W5 647 aa10.48□□□□□ -0.73
RAB5B-205ENST00000549034 EPM2AIP1Q7L775 607 aaPredicted RBP10.48□□□□□ -0.73
RAB5B-205ENST00000549034 ELOA2Q8IYF1 753 aaPredicted RBP10.48□□□□□ -0.73
RAB5B-205ENST00000549034 LRRC43Q8N309 656 aa10.48□□□□□ -0.73
RAB5B-205ENST00000549034 KLHL23Q8NBE8 558 aa10.48□□□□□ -0.73
RAB5B-205ENST00000549034 COLGALT1Q8NBJ5 622 aa10.48□□□□□ -0.73
RAB5B-205ENST00000549034 SCFD1Q8WVM8 642 aa10.48□□□□□ -0.73
RAB5B-205ENST00000549034 RSPH1Q8WYR4 309 aa10.48□□□□□ -0.73
RAB5B-205ENST00000549034 CLP1Q92989 425 aaKnown RBP10.48□□□□□ -0.73
RAB5B-205ENST00000549034 SMARCE1Q969G3 411 aa10.48□□□□□ -0.73
RAB5B-205ENST00000549034 ZNF558Q96NG5 402 aa10.48□□□□□ -0.73
RAB5B-205ENST00000549034 CDX2Q99626 313 aaPredicted RBP10.48□□□□□ -0.73
RAB5B-205ENST00000549034 CXCL16Q9H2A7 254 aa10.48□□□□□ -0.73
RAB5B-205ENST00000549034 RPF1Q9H9Y2 349 aaKnown RBP10.48□□□□□ -0.73
RAB5B-205ENST00000549034 MTMR10Q9NXD2 777 aa10.48□□□□□ -0.73
RAB5B-205ENST00000549034 AGO2Q9UKV8 859 aaKnown RBP10.48□□□□□ -0.73
RAB5B-205ENST00000549034 FAN1Q9Y2M0 1017 aa10.48□□□□□ -0.73
RAB5B-205ENST00000549034 PCDHA5Q9Y5H7 936 aa10.48□□□□□ -0.73
RAB5B-205ENST00000549034 CITO14578 2027 aa10.47□□□□□ -0.73
RAB5B-205ENST00000549034 EPOPA6NHQ4 379 aa10.47□□□□□ -0.73
RAB5B-205ENST00000549034 H3BNC9 293 aa10.47□□□□□ -0.73
RAB5B-205ENST00000549034 CLIC2O15247 247 aa10.47□□□□□ -0.73
RAB5B-205ENST00000549034 ZC3H11AO75152 810 aaKnown RBP eCLIP10.47□□□□□ -0.73
RAB5B-205ENST00000549034 KIF20AO95235 890 aa10.47□□□□□ -0.73
RAB5B-205ENST00000549034 LDHAP00338 332 aaKnown RBP10.47□□□□□ -0.73
RAB5B-205ENST00000549034 CLTAP09496 248 aa10.47□□□□□ -0.73
RAB5B-205ENST00000549034 LINC00271P0C7V0 271 aa10.47□□□□□ -0.73
RAB5B-205ENST00000549034 HOXD13P35453 343 aa10.47□□□□□ -0.73
RAB5B-205ENST00000549034 PBX3P40426 434 aa10.47□□□□□ -0.73
RAB5B-205ENST00000549034 TNFSF9P41273 254 aa10.47□□□□□ -0.73
RAB5B-205ENST00000549034 OR1G1P47890 313 aa10.47□□□□□ -0.73
RAB5B-205ENST00000549034 ACOT2P49753 483 aa10.47□□□□□ -0.73
RAB5B-205ENST00000549034 KRT17Q04695 432 aa10.47□□□□□ -0.73
RAB5B-205ENST00000549034 KCNB1Q14721 858 aa10.47□□□□□ -0.73
RAB5B-205ENST00000549034 KYAT1Q16773 422 aa10.47□□□□□ -0.73
RAB5B-205ENST00000549034 KNOP1Q1ED39 458 aaKnown RBP10.47□□□□□ -0.73
RAB5B-205ENST00000549034 SLC10A6Q3KNW5 377 aa10.47□□□□□ -0.73
RAB5B-205ENST00000549034 ARMCX5Q6P1M9 558 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms