RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 USO1O60763 962 aaKnown RBP14.23□□□□□ -0.13
PTCH1-218ENST00000548945 TADA2AO75478 443 aa14.23□□□□□ -0.13
PTCH1-218ENST00000548945 SPATA31C1P0DKV0 1188 aa14.23□□□□□ -0.13
PTCH1-218ENST00000548945 SRFP11831 508 aa14.23□□□□□ -0.13
PTCH1-218ENST00000548945 TUSC3Q13454 348 aa14.23□□□□□ -0.13
PTCH1-218ENST00000548945 HSP90AA2PQ14568 343 aaPredicted RBP14.23□□□□□ -0.13
PTCH1-218ENST00000548945 ME3Q16798 604 aa14.23□□□□□ -0.13
PTCH1-218ENST00000548945 PALB2Q86YC2 1186 aa14.23□□□□□ -0.13
PTCH1-218ENST00000548945 ZBTB8OSQ8IWT0 167 aa14.23□□□□□ -0.13
PTCH1-218ENST00000548945 SLC44A3Q8N4M1 653 aa14.23□□□□□ -0.13
PTCH1-218ENST00000548945 NECAB1Q8N987 351 aa14.23□□□□□ -0.13
PTCH1-218ENST00000548945 RIN2Q8WYP3 895 aaPredicted RBP14.23□□□□□ -0.13
PTCH1-218ENST00000548945 NKD2Q969F2 451 aaPredicted RBP14.23□□□□□ -0.13
PTCH1-218ENST00000548945 NACC1Q96RE7 527 aa14.23□□□□□ -0.13
PTCH1-218ENST00000548945 MYADMQ96S97 322 aa14.23□□□□□ -0.13
PTCH1-218ENST00000548945 C2orf40Q9H1Z8 148 aa14.23□□□□□ -0.13
PTCH1-218ENST00000548945 FZD8Q9H461 694 aa14.23□□□□□ -0.13
PTCH1-218ENST00000548945 PARP2Q9UGN5 583 aa14.23□□□□□ -0.13
PTCH1-218ENST00000548945 ZFP37Q9Y6Q3 630 aaPredicted RBP14.23□□□□□ -0.13
PTCH1-218ENST00000548945 CACNA1IQ9P0X4 2223 aa14.23□□□□□ -0.13
PTCH1-218ENST00000548945 FANCMQ8IYD8 2048 aa14.22□□□□□ -0.13
PTCH1-218ENST00000548945 MYH15Q9Y2K3 1946 aa14.22□□□□□ -0.13
PTCH1-218ENST00000548945 POTEMA6NI47 508 aa14.22□□□□□ -0.13
PTCH1-218ENST00000548945 WNT7AO00755 349 aa14.22□□□□□ -0.13
PTCH1-218ENST00000548945 N4BP3O15049 544 aa14.22□□□□□ -0.13
PTCH1-218ENST00000548945 DTNBO60941 627 aa14.22□□□□□ -0.13
PTCH1-218ENST00000548945 ZMYND10O75800 440 aa14.22□□□□□ -0.13
PTCH1-218ENST00000548945 LAMP2P13473 410 aa14.22□□□□□ -0.13
PTCH1-218ENST00000548945 ORC2Q13416 577 aaPredicted RBP14.22□□□□□ -0.13
PTCH1-218ENST00000548945 PDXDC1Q6P996 788 aa14.22□□□□□ -0.13
PTCH1-218ENST00000548945 FRMD5Q7Z6J6 570 aa14.22□□□□□ -0.13
PTCH1-218ENST00000548945 DTWD2Q8NBA8 298 aa14.22□□□□□ -0.13
PTCH1-218ENST00000548945 SNX27Q96L92 541 aa14.22□□□□□ -0.13
PTCH1-218ENST00000548945 POLR3CQ9BUI4 534 aaPredicted RBP14.22□□□□□ -0.13
PTCH1-218ENST00000548945 PIDD1Q9HB75 910 aa14.22□□□□□ -0.13
PTCH1-218ENST00000548945 OTOGLQ3ZCN5 2332 aa14.21□□□□□ -0.13
PTCH1-218ENST00000548945 ANHXE9PGG2 379 aa14.21□□□□□ -0.13
PTCH1-218ENST00000548945 NARSO43776 548 aaKnown RBP14.21□□□□□ -0.13
PTCH1-218ENST00000548945 EIF5BO60841 1220 aaKnown RBP14.21□□□□□ -0.13
PTCH1-218ENST00000548945 LARGE1O95461 756 aa14.21□□□□□ -0.13
PTCH1-218ENST00000548945 HNRNPA1P09651 372 aaKnown RBP eCLIP14.21□□□□□ -0.13
PTCH1-218ENST00000548945 SPATA31D3P0C874 917 aa14.21□□□□□ -0.13
PTCH1-218ENST00000548945 ATP2B1P20020 1258 aa14.21□□□□□ -0.13
PTCH1-218ENST00000548945 MUTP22033 750 aa14.21□□□□□ -0.13
PTCH1-218ENST00000548945 HOXA9P31269 272 aa14.21□□□□□ -0.13
PTCH1-218ENST00000548945 FOXK2Q01167 660 aa14.21□□□□□ -0.13
PTCH1-218ENST00000548945 ELAVL2Q12926 359 aaKnown RBP14.21□□□□□ -0.13
PTCH1-218ENST00000548945 ANGPT1Q15389 498 aa14.21□□□□□ -0.13
PTCH1-218ENST00000548945 PHLDB3Q6NSJ2 640 aa14.21□□□□□ -0.13
PTCH1-218ENST00000548945 SPATA31D4Q6ZUB0 917 aa14.21□□□□□ -0.13
PTCH1-218ENST00000548945 CDR2LQ86X02 465 aaPredicted RBP14.21□□□□□ -0.13
PTCH1-218ENST00000548945 CATSPER3Q86XQ3 398 aa14.21□□□□□ -0.13
PTCH1-218ENST00000548945 ERMNQ8TAM6 284 aa14.21□□□□□ -0.13
PTCH1-218ENST00000548945 RSAD2Q8WXG1 361 aa14.21□□□□□ -0.13
PTCH1-218ENST00000548945 PIK3R5Q8WYR1 880 aa14.21□□□□□ -0.13
PTCH1-218ENST00000548945 B3GALT6Q96L58 329 aa14.21□□□□□ -0.13
PTCH1-218ENST00000548945 TTPALQ9BTX7 342 aa14.21□□□□□ -0.13
PTCH1-218ENST00000548945 TMEM60Q9H2L4 133 aa14.21□□□□□ -0.13
PTCH1-218ENST00000548945 PDZD7Q9H5P4 517 aa14.21□□□□□ -0.13
PTCH1-218ENST00000548945 GPRC5CQ9NQ84 441 aa14.21□□□□□ -0.13
PTCH1-218ENST00000548945 SLC2A4RGQ9NR83 387 aa14.21□□□□□ -0.13
PTCH1-218ENST00000548945 KLK14Q9P0G3 267 aa14.21□□□□□ -0.13
PTCH1-218ENST00000548945 FBXW11Q9UKB1 542 aa14.21□□□□□ -0.13
PTCH1-218ENST00000548945 CEP250Q9BV73 2442 aa14.2□□□□□ -0.14
PTCH1-218ENST00000548945 MIA3Q5JRA6 1907 aa14.2□□□□□ -0.14
PTCH1-218ENST00000548945 KRBA1A5PL33 1030 aa14.2□□□□□ -0.14
PTCH1-218ENST00000548945 THP07101 528 aa14.2□□□□□ -0.14
PTCH1-218ENST00000548945 CFHP08603 1231 aa14.2□□□□□ -0.14
PTCH1-218ENST00000548945 RPA1P27694 616 aa14.2□□□□□ -0.14
PTCH1-218ENST00000548945 NAMPTP43490 491 aa14.2□□□□□ -0.14
PTCH1-218ENST00000548945 PRPF4BQ13523 1007 aaKnown RBP14.2□□□□□ -0.14
PTCH1-218ENST00000548945 HTR4Q13639 388 aa14.2□□□□□ -0.14
PTCH1-218ENST00000548945 PPP2R5AQ15172 486 aa14.2□□□□□ -0.14
PTCH1-218ENST00000548945 SAFBQ15424 915 aaKnown RBP eCLIP14.2□□□□□ -0.14
PTCH1-218ENST00000548945 MAPK6Q16659 721 aa14.2□□□□□ -0.14
PTCH1-218ENST00000548945 RTP2Q5QGT7 225 aa14.2□□□□□ -0.14
PTCH1-218ENST00000548945 ADPGKQ9BRR6 497 aa14.2□□□□□ -0.14
PTCH1-218ENST00000548945 SEMA4AQ9H3S1 761 aa14.2□□□□□ -0.14
PTCH1-218ENST00000548945 NOTCH4Q99466 2003 aa14.19□□□□□ -0.14
PTCH1-218ENST00000548945 ACKR2O00590 384 aa14.19□□□□□ -0.14
PTCH1-218ENST00000548945 PTGESO14684 152 aa14.19□□□□□ -0.14
PTCH1-218ENST00000548945 JAK2O60674 1132 aa14.19□□□□□ -0.14
PTCH1-218ENST00000548945 MED24O75448 989 aa14.19□□□□□ -0.14
PTCH1-218ENST00000548945 RECQL4O94761 1208 aa14.19□□□□□ -0.14
PTCH1-218ENST00000548945 KIF4AO95239 1232 aa14.19□□□□□ -0.14
PTCH1-218ENST00000548945 POU2F2P09086 479 aa14.19□□□□□ -0.14
PTCH1-218ENST00000548945 MYBP10242 640 aa14.19□□□□□ -0.14
PTCH1-218ENST00000548945 RPL17P18621 184 aaKnown RBP14.19□□□□□ -0.14
PTCH1-218ENST00000548945 CYP11B2P19099 503 aa14.19□□□□□ -0.14
PTCH1-218ENST00000548945 MCM7P33993 719 aa14.19□□□□□ -0.14
PTCH1-218ENST00000548945 RBM25P49756 843 aaKnown RBP14.19□□□□□ -0.14
PTCH1-218ENST00000548945 NAB2Q15742 525 aa14.19□□□□□ -0.14
PTCH1-218ENST00000548945 PSMD5Q16401 504 aa14.19□□□□□ -0.14
PTCH1-218ENST00000548945 LIN9Q5TKA1 542 aa14.19□□□□□ -0.14
PTCH1-218ENST00000548945 FAM171A1Q5VUB5 890 aa14.19□□□□□ -0.14
PTCH1-218ENST00000548945 PRSS55Q6UWB4 352 aaPredicted RBP14.19□□□□□ -0.14
PTCH1-218ENST00000548945 RTL10Q7L3V2 364 aa14.19□□□□□ -0.14
PTCH1-218ENST00000548945 GET4Q7L5D6 327 aaPredicted RBP14.19□□□□□ -0.14
PTCH1-218ENST00000548945 MAEAQ7L5Y9 396 aa14.19□□□□□ -0.14
PTCH1-218ENST00000548945 GLYCTKQ8IVS8 523 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms