RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 GRIK3Q13003 919 aa15.07■□□□□ 0
CDX2-202ENST00000548877 MXD4Q14582 209 aaPredicted RBP15.07■□□□□ 0
CDX2-202ENST00000548877 EMC2Q15006 297 aa15.07■□□□□ 0
CDX2-202ENST00000548877 AMHR2Q16671 573 aa15.07■□□□□ 0
CDX2-202ENST00000548877 GALNT17Q6IS24 598 aa15.07■□□□□ 0
CDX2-202ENST00000548877 MAMSTRQ6ZN01 415 aa15.07■□□□□ 0
CDX2-202ENST00000548877 RTL10Q7L3V2 364 aa15.07■□□□□ 0
CDX2-202ENST00000548877 HACE1Q8IYU2 909 aa15.07■□□□□ 0
CDX2-202ENST00000548877 PIK3R5Q8WYR1 880 aa15.07■□□□□ 0
CDX2-202ENST00000548877 SECISBP2LQ93073 1101 aaKnown RBP15.07■□□□□ 0
CDX2-202ENST00000548877 CLSTN3Q9BQT9 956 aa15.07■□□□□ 0
CDX2-202ENST00000548877 NFKBIZQ9BYH8 718 aa15.07■□□□□ 0
CDX2-202ENST00000548877 FAM126AQ9BYI3 521 aaPredicted RBP15.07■□□□□ 0
CDX2-202ENST00000548877 PRMT8Q9NR22 394 aaPredicted RBP15.07■□□□□ 0
CDX2-202ENST00000548877 DDX25Q9UHL0 483 aaKnown RBP15.07■□□□□ 0
CDX2-202ENST00000548877 KCNH3Q9ULD8 1083 aa15.07■□□□□ 0
CDX2-202ENST00000548877 HES2Q9Y543 173 aa15.07■□□□□ 0
CDX2-202ENST00000548877 CPA1P15085 419 aa15.06■□□□□ 0
CDX2-202ENST00000548877 RPL17P18621 184 aaKnown RBP15.06■□□□□ 0
CDX2-202ENST00000548877 YWHABP31946 246 aaKnown RBP15.06■□□□□ 0
CDX2-202ENST00000548877 CSTF1Q05048 431 aaKnown RBP15.06■□□□□ 0
CDX2-202ENST00000548877 NCBP1Q09161 790 aaKnown RBP15.06■□□□□ 0
CDX2-202ENST00000548877 FZD5Q13467 585 aa15.06■□□□□ 0
CDX2-202ENST00000548877 EPHA7Q15375 998 aa15.06■□□□□ 0
CDX2-202ENST00000548877 UVSSAQ2YD98 709 aa15.06■□□□□ 0
CDX2-202ENST00000548877 RTP2Q5QGT7 225 aa15.06■□□□□ 0
CDX2-202ENST00000548877 ZBTB41Q5SVQ8 909 aa15.06■□□□□ 0
CDX2-202ENST00000548877 OTUD6AQ7L8S5 288 aa15.06■□□□□ 0
CDX2-202ENST00000548877 BLIDQ8IZY5 108 aa15.06■□□□□ 0
CDX2-202ENST00000548877 XPNPEP1Q9NQW7 623 aa15.06■□□□□ 0
CDX2-202ENST00000548877 SMG5Q9UPR3 1016 aaKnown RBP15.06■□□□□ 0
CDX2-202ENST00000548877 SF3B1O75533 1304 aaKnown RBP eCLIP15.06■□□□□ 0
CDX2-202ENST00000548877 VWA8A3KMH1 1905 aa15.05■□□□□ 0
CDX2-202ENST00000548877 TBX3O15119 743 aa15.05■□□□□ -0
CDX2-202ENST00000548877 NCAM2O15394 837 aa15.05■□□□□ -0
CDX2-202ENST00000548877 SLC37A4O43826 429 aa15.05■□□□□ -0
CDX2-202ENST00000548877 ARF4P18085 180 aaPredicted RBP15.05■□□□□ -0
CDX2-202ENST00000548877 PDIA3P30101 505 aaKnown RBP15.05■□□□□ -0
CDX2-202ENST00000548877 NTHL1P78549 312 aa15.05■□□□□ -0
CDX2-202ENST00000548877 MBTD1Q05BQ5 628 aa15.05■□□□□ -0
CDX2-202ENST00000548877 HSP90AA2PQ14568 343 aaPredicted RBP15.05■□□□□ -0
CDX2-202ENST00000548877 UBXN2BQ14CS0 331 aa15.05■□□□□ -0
CDX2-202ENST00000548877 PPM1LQ5SGD2 360 aa15.05■□□□□ -0
CDX2-202ENST00000548877 LIN9Q5TKA1 542 aa15.05■□□□□ -0
CDX2-202ENST00000548877 PPP4R3AQ6IN85 833 aa15.05■□□□□ -0
CDX2-202ENST00000548877 PRSS55Q6UWB4 352 aaPredicted RBP15.05■□□□□ -0
CDX2-202ENST00000548877 GLYCTKQ8IVS8 523 aa15.05■□□□□ -0
CDX2-202ENST00000548877 ST13P5Q8NFI4 369 aaPredicted RBP15.05■□□□□ -0
CDX2-202ENST00000548877 LNX1Q8TBB1 728 aaPredicted RBP15.05■□□□□ -0
CDX2-202ENST00000548877 CPB2Q96IY4 423 aa15.05■□□□□ -0
CDX2-202ENST00000548877 MTRQ99707 1265 aa15.05■□□□□ -0
CDX2-202ENST00000548877 LXNQ9BS40 222 aa15.05■□□□□ -0
CDX2-202ENST00000548877 TTPALQ9BTX7 342 aa15.05■□□□□ -0
CDX2-202ENST00000548877 NXF3Q9H4D5 531 aaKnown RBP15.05■□□□□ -0
CDX2-202ENST00000548877 CDV3Q9UKY7 258 aaKnown RBP15.05■□□□□ -0
CDX2-202ENST00000548877 MAP1BP46821 2468 aaKnown RBP15.05■□□□□ -0
CDX2-202ENST00000548877 F5P12259 2224 aa15.04■□□□□ -0
CDX2-202ENST00000548877 A0A1B0GUA9 196 aa15.04■□□□□ -0
CDX2-202ENST00000548877 SHISA7A6NL88 538 aa15.04■□□□□ -0
CDX2-202ENST00000548877 XYLBO75191 536 aa15.04■□□□□ -0
CDX2-202ENST00000548877 TADA2AO75478 443 aa15.04■□□□□ -0
CDX2-202ENST00000548877 ECI2O75521 394 aa15.04■□□□□ -0
CDX2-202ENST00000548877 C8AP07357 584 aa15.04■□□□□ -0
CDX2-202ENST00000548877 ADRB1P08588 477 aa15.04■□□□□ -0
CDX2-202ENST00000548877 GCFC2P16383 781 aaKnown RBP15.04■□□□□ -0
CDX2-202ENST00000548877 RPS6KB1P23443 525 aa15.04■□□□□ -0
CDX2-202ENST00000548877 TARSP26639 723 aaKnown RBP15.04■□□□□ -0
CDX2-202ENST00000548877 TUSC3Q13454 348 aa15.04■□□□□ -0
CDX2-202ENST00000548877 TFDP1Q14186 410 aa15.04■□□□□ -0
CDX2-202ENST00000548877 PDXDC1Q6P996 788 aa15.04■□□□□ -0
CDX2-202ENST00000548877 SLC27A1Q6PCB7 646 aa15.04■□□□□ -0
CDX2-202ENST00000548877 BLOC1S2Q6QNY1 142 aa15.04■□□□□ -0
CDX2-202ENST00000548877 KRT25Q7Z3Z0 450 aa15.04■□□□□ -0
CDX2-202ENST00000548877 NPAS3Q8IXF0 933 aa15.04■□□□□ -0
CDX2-202ENST00000548877 ZNF687Q8N1G0 1237 aa15.04■□□□□ -0
CDX2-202ENST00000548877 ITFG1Q8TB96 612 aa15.04■□□□□ -0
CDX2-202ENST00000548877 PHF20Q9BVI0 1012 aa15.04■□□□□ -0
CDX2-202ENST00000548877 ZSWIM4Q9H7M6 989 aa15.04■□□□□ -0
CDX2-202ENST00000548877 AVENQ9NQS1 362 aaPredicted RBP15.04■□□□□ -0
CDX2-202ENST00000548877 INO80B-WBP1J3KQ70 363 aa15.03■□□□□ -0
CDX2-202ENST00000548877 LYPLA2O95372 231 aa15.03■□□□□ -0
CDX2-202ENST00000548877 DEXIO95424 95 aa15.03■□□□□ -0
CDX2-202ENST00000548877 TDGF1P13385 188 aa15.03■□□□□ -0
CDX2-202ENST00000548877 AKAP5P24588 427 aa15.03■□□□□ -0
CDX2-202ENST00000548877 ARL2P36404 184 aa15.03■□□□□ -0
CDX2-202ENST00000548877 SPIRE1Q08AE8 756 aa15.03■□□□□ -0
CDX2-202ENST00000548877 ELAVL2Q12926 359 aaKnown RBP15.03■□□□□ -0
CDX2-202ENST00000548877 RAB33AQ14088 237 aa15.03■□□□□ -0
CDX2-202ENST00000548877 PSMD5Q16401 504 aa15.03■□□□□ -0
CDX2-202ENST00000548877 XKR9Q5GH70 373 aa15.03■□□□□ -0
CDX2-202ENST00000548877 TRIM22Q8IYM9 498 aa15.03■□□□□ -0
CDX2-202ENST00000548877 HAS1Q92839 578 aa15.03■□□□□ -0
CDX2-202ENST00000548877 JAKMIP1Q96N16 626 aaKnown RBP15.03■□□□□ -0
CDX2-202ENST00000548877 PAAF1Q9BRP4 392 aa15.03■□□□□ -0
CDX2-202ENST00000548877 IER2Q9BTL4 223 aa15.03■□□□□ -0
CDX2-202ENST00000548877 APOL6Q9BWW8 343 aa15.03■□□□□ -0
CDX2-202ENST00000548877 BACH2Q9BYV9 841 aa15.03■□□□□ -0
CDX2-202ENST00000548877 TRIM6Q9C030 488 aaPredicted RBP15.03■□□□□ -0
CDX2-202ENST00000548877 LRP3O75074 770 aa15.02■□□□□ -0
CDX2-202ENST00000548877 CD72P21854 359 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms